Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0833
         (852 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.3  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   3.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   9.4  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   9.4  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 548 QVHSSRSRQKVSDIIICDCP 489
           QV S RS+++ +    CDCP
Sbjct: 275 QVPSPRSQRRYTGRATCDCP 294


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 17  IITYLKKNMSKIIVLSKCLRLFLSYIFYIVI 109
           I+T LKK  S I +L + +  F     +I++
Sbjct: 91  IVTILKKTKSNIFILKESVDTFNDIFGWIIL 121


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 665 FVSFSHICALSQILN 621
           F+SFS IC L Q L+
Sbjct: 220 FISFSKICYLHQHLS 234


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 665 FVSFSHICALSQILN 621
           F+SFS IC L Q L+
Sbjct: 238 FISFSKICYLHQHLS 252


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +3

Query: 513 RDFLAGTRGVNLCDLFYFVYLV 578
           ++F + TRG+ L  + YFV+L+
Sbjct: 381 KNFFSITRGLILSFVDYFVFLL 402


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,681
Number of Sequences: 336
Number of extensions: 3838
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)