Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0829
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.4  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   5.8  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   7.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.7  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = +3

Query: 66  KLVIIIVLGSYSYGFQYDGLRVKFGWSDALADIEYF 173
           +LV + ++ ++ Y F      + FGW   + D+  F
Sbjct: 132 ELVAVHLVLAFLYSFDLFANGITFGWHTYIFDVPNF 167


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 162 IEYFYSIPRTIKDAEND 212
           +EY  S+ + I+D END
Sbjct: 145 VEYIRSLKQMIEDHEND 161


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 85  YSALIRTDSSTTVSG*NSAGQTPWRTS 165
           YSA +  D  T VS  N   Q  W +S
Sbjct: 132 YSAYLVADKVTVVSKNNDDEQYVWESS 158


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -3

Query: 554 VSVWSGDPHSTVLQCSSVFYLWTG 483
           V +W GDP S +     V Y   G
Sbjct: 438 VQLWLGDPSSVLSHGHRVIYSTVG 461


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,120
Number of Sequences: 336
Number of extensions: 4648
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)