Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0827
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.5  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   6.1  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   6.1  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   6.1  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   6.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.1  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -2

Query: 474 SIMNSANISSIEGANPDLLHASLKH 400
           ++  ++N+S    ++PDL +  LKH
Sbjct: 292 AVAAASNLSPKTNSSPDLWNGKLKH 316


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 155 GRTPPSSLR*VDSPLCTAQAPAQTPE 78
           GRTPP+ L  V S L   + P    E
Sbjct: 348 GRTPPNPLDAVTSGLLPVRPPLTREE 373


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 550 KVWFVLRKYNL 582
           K+WFVLR Y +
Sbjct: 359 KLWFVLRLYGI 369


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 11/45 (24%), Positives = 20/45 (44%)
 Frame = -3

Query: 221 CSCTGSHSPALCVRT*SHHSRSGRTPPSSLR*VDSPLCTAQAPAQ 87
           C+ TGS   A  +    H+  S + PP++      P+    +P +
Sbjct: 201 CAQTGSGKTAAFMLPIIHNLLSDKNPPNTENNCAQPVVVIMSPTR 245


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
 Frame = +1

Query: 229 QP-PHGFQQDAPREHRQIHQVLSERRNP 309
           QP P  F   + + H  IHQ +    NP
Sbjct: 29  QPLPRHFNPPSDKLHHPIHQTVIYHNNP 56


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = -1

Query: 505 CPVDSFVRFRFHYELRQYQFH 443
           CP+   + FR+H+ +     H
Sbjct: 155 CPIHPGMTFRYHFNVHNSGTH 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,343
Number of Sequences: 336
Number of extensions: 2711
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)