Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0826
         (838 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0YUE9 Cluster: Putative Ig precursor; n=1; Chlorobium ...    33   8.9  
UniRef50_Q4Z2R8 Cluster: Pseudouridine synthetase, putative; n=3...    33   8.9  

>UniRef50_Q0YUE9 Cluster: Putative Ig precursor; n=1; Chlorobium
           ferrooxidans DSM 13031|Rep: Putative Ig precursor -
           Chlorobium ferrooxidans DSM 13031
          Length = 695

 Score = 33.1 bits (72), Expect = 8.9
 Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 7/118 (5%)
 Frame = +3

Query: 444 GLSLNREVH*GTGMVQERQSYSKMIF-ILNNTKFIVGKLS*IYF--GCVITNKSNPGGNF 614
           GL+LN      TG     QS + ++F + +    +    S + F     IT  +N     
Sbjct: 88  GLTLNSSTGEVTGTPSSAQSAADVVFEVKDANNVLAAATSTVSFTVNSDITATANTDPRN 147

Query: 615 ST*NSTLSPFSPLPIRFSLRGYSSYARTGR*AHGLNLR----EFANTSHSKSSASQIL 776
            T  + +S FSPL      + Y+   +TG+   GL L     E A T  S  SA+ ++
Sbjct: 148 LTVGAVMSSFSPLTAIGGTQPYTYSVKTGKLPSGLTLNGSKGEVAGTPSSAQSAADVV 205


>UniRef50_Q4Z2R8 Cluster: Pseudouridine synthetase, putative; n=3;
           Plasmodium (Vinckeia)|Rep: Pseudouridine synthetase,
           putative - Plasmodium berghei
          Length = 318

 Score = 33.1 bits (72), Expect = 8.9
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
 Frame = -3

Query: 347 FILYKLLLMICNVHLNTYCCSQSTYRLKTNIIKLGKIYKSLNN---KETDKKLKRIDLK 180
           F+   LLL IC    NT+   Q+      NII+L K+    NN   +++DK ++  ++K
Sbjct: 15  FLYLFLLLFICIKKYNTFTILQTNCNKNENIIRLNKLISINNNISRRKSDKFIQNANIK 73


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 720,429,393
Number of Sequences: 1657284
Number of extensions: 13427372
Number of successful extensions: 30536
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 29213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30531
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72963732758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)