Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0826
         (838 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF246221-1|AAF66130.1|  277|Homo sapiens transmembrane protein B...    32   2.2  
AK000503-1|BAA91210.1|  266|Homo sapiens protein ( Homo sapiens ...    31   6.8  
AY601916-1|AAT09159.1|  133|Homo sapiens proline-rich cyclin A1 ...    30   9.0  

>AF246221-1|AAF66130.1|  277|Homo sapiens transmembrane protein BRI
           protein.
          Length = 277

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = -3

Query: 260 NIIKLGK-IYKSLNNKETDKKLKRIDLKSXXXXXXXXXLFIRQFIKKNTIQLLIC-SLFL 87
           NI  LG  IY+  ++KET K  +R  +K            IR F  K  ++ LIC +LFL
Sbjct: 211 NIDHLGFFIYRLCHDKETYKLQRRETIKGIQKREASNCFAIRHFENKFAVETLICFNLFL 270

Query: 86  N 84
           N
Sbjct: 271 N 271


>AK000503-1|BAA91210.1|  266|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20496 fis, clone KAT08729. ).
          Length = 266

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -3

Query: 260 NIIKLGK-IYKSLNNKETDKKLKRIDLKSXXXXXXXXXLFIRQFIKKNTIQLLICS 96
           NI  LG  IY+  ++KET K  +R  +K            IR F  K  ++ LICS
Sbjct: 211 NIDHLGFFIYRLCHDKETHKLQRRETIKGIQKREASNCFAIRHFENKFAVETLICS 266


>AY601916-1|AAT09159.1|  133|Homo sapiens proline-rich cyclin A1
           interacting protein protein.
          Length = 133

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 17/28 (60%), Positives = 17/28 (60%)
 Frame = +1

Query: 634 SPLFPPYLFALA*GAIPVTRGRVGELTG 717
           SP FPPY F L     PV RGR GEL G
Sbjct: 42  SPPFPPYSFRLLWCPPPVPRGR-GELLG 68


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,637,208
Number of Sequences: 237096
Number of extensions: 1968054
Number of successful extensions: 3037
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3037
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)