Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0825
(788 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC36.05c |clr6||histone deacetylase |Schizosaccharomyces pombe... 245 7e-66
SPAC3G9.07c |hos2|hda1, phd1|histone deacetylase |Schizosaccharo... 228 6e-61
SPBC800.03 |clr3||histone deacetylase |Schizosaccharomyces pombe... 41 2e-04
SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 0.76
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 27 3.1
SPCC63.10c |||dolichol kinase |Schizosaccharomyces pombe|chr 3||... 27 4.0
SPAC869.11 ||SPAC922.08c|amino acid permease, unknown 6|Schizosa... 27 4.0
SPCC1494.01 ||SPCC965.15|iron/ascorbate oxidoreductase family|Sc... 27 4.0
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 26 5.4
SPCC594.02c |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.4
SPBC577.12 |mug71||endoribonuclease |Schizosaccharomyces pombe|c... 26 7.1
SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces ... 25 9.4
SPBP26C9.02c |car1||arginase Car1 |Schizosaccharomyces pombe|chr... 25 9.4
>SPBC36.05c |clr6||histone deacetylase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 405
Score = 245 bits (599), Expect = 7e-66
Identities = 102/172 (59%), Positives = 134/172 (77%)
Frame = +1
Query: 271 QQRVAYFYNPDVGNFHYGPGHPMKPHRLAVTHCLVLKYGLHKKMQIYKPYRASAHDMCRF 450
+++V+YFY+ DVGN+HYGP HPMKPHR+ + H LV+ Y L++K+ + P RA+ +DM R
Sbjct: 5 KKKVSYFYDEDVGNYHYGPQHPMKPHRVRMVHNLVVNYNLYEKLNVITPVRATRNDMTRC 64
Query: 451 HSEDYIEFLQNVTPQNIQSYSKDLLHYNVGDDCPVFEGLFDFCSMYTGASLEGAMKLNNN 630
H+++YIEFL VTP ++ + L +NVGDDCPVF+GL++FCS+ G S+ A +LN+
Sbjct: 65 HTDEYIEFLWRVTPDTMEKFQPHQLKFNVGDDCPVFDGLYEFCSISAGGSIGAAQELNSG 124
Query: 631 TCDIAINWSGGLHHAKKFEPSGFCYVNDIVIAILELLKYHPRVLYIDIDVHH 786
+IAINW+GGLHHAKK E SGFCYVNDI +A LELLKYH RVLYIDIDVHH
Sbjct: 125 NAEIAINWAGGLHHAKKREASGFCYVNDIALAALELLKYHQRVLYIDIDVHH 176
>SPAC3G9.07c |hos2|hda1, phd1|histone deacetylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 228 bits (558), Expect = 6e-61
Identities = 95/172 (55%), Positives = 126/172 (73%)
Frame = +1
Query: 271 QQRVAYFYNPDVGNFHYGPGHPMKPHRLAVTHCLVLKYGLHKKMQIYKPYRASAHDMCRF 450
++RV Y + VGN+HYG HPMKPHR+ +T+ LV+ YGLH KM ++ P A+ +M F
Sbjct: 25 KKRVTYHLDEQVGNYHYGDKHPMKPHRITITNHLVMGYGLHNKMSVFSPRMATFGEMSEF 84
Query: 451 HSEDYIEFLQNVTPQNIQSYSKDLLHYNVGDDCPVFEGLFDFCSMYTGASLEGAMKLNNN 630
H EDY++FL+ VTP N + ++ +N+GDDCPVF+G ++F GASL+ + KL
Sbjct: 85 HREDYLDFLKRVTPDNAEQFADKFQQFNIGDDCPVFDGTYEFSQRSAGASLDASRKLVQG 144
Query: 631 TCDIAINWSGGLHHAKKFEPSGFCYVNDIVIAILELLKYHPRVLYIDIDVHH 786
DIAINWSGGLHHAK+ E SGFCYVNDIV+AIL +L++ PRVLYIDID+HH
Sbjct: 145 QTDIAINWSGGLHHAKRGEASGFCYVNDIVLAILNMLRFFPRVLYIDIDIHH 196
>SPBC800.03 |clr3||histone deacetylase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 687
Score = 40.7 bits (91), Expect = 2e-04
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = +1
Query: 667 HHAKKFEPSGFCYVNDIVIAILELLKYHP----RVLYIDIDVHH 786
HHA+ +P GFC N++ + +L+ P RVL +D D+HH
Sbjct: 194 HHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIVDWDIHH 237
>SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 29.1 bits (62), Expect = 0.76
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +1
Query: 220 EYYFCVER----IRICLSTMTQQRVAYFYNPDVGNFHYGPGHPMKPHRLAV 360
EY+ V++ IR+ L+ T Q + + DV N H+G KPH L +
Sbjct: 267 EYFAYVDQDPCHIRV-LNANTDQSLILYTQSDVKNLHFGKNKHTKPHLLVM 316
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 27.1 bits (57), Expect = 3.1
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = -3
Query: 498 ILRSYILQKLYVVLAVETAHIVSAGPIRLIYLHFLMKTILQHETM----RHSQPVW-FHW 334
+L+ + L + + + +I+SAG RL+ LH + +L + HS+ +W W
Sbjct: 573 VLKGHSLTVTTIKFSPDDRYILSAGRDRLVCLHEQAENLLDYNNFASIKAHSRIIWDASW 632
Query: 333 MP 328
P
Sbjct: 633 AP 634
>SPCC63.10c |||dolichol kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 465
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -3
Query: 486 YILQKLYVVLAVETAHIVSAGPIRLIYLHFLMKTILQHETMRHSQPVW-FHWMPWTVVE 313
Y+L ++ E +S+ P ++Y+ F ++L HE ++ F W +T +E
Sbjct: 65 YLLGSSSIIQLYEPLLWLSSFPFCILYVGFGENSVLYHEMYTMEMALYCFRWTGFTFIE 123
>SPAC869.11 ||SPAC922.08c|amino acid permease, unknown
6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 26.6 bits (56), Expect = 4.0
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 13/82 (15%)
Frame = -3
Query: 564 TFEYWTVVSN----------IIVQKIF*VTLYILRSYILQKLYVVLA---VETAHIVSAG 424
TF YWT +++ II+ +F V Y +IL + VV + A I++ G
Sbjct: 180 TFRYWTDINSAAWISIFLVVIIIVNLFGVRAYGEVEFILSTVKVVATFGFIILAIIINCG 239
Query: 423 PIRLIYLHFLMKTILQHETMRH 358
+ + ++ +I++H+ RH
Sbjct: 240 GVPTDHRGYIGGSIIKHKPFRH 261
>SPCC1494.01 ||SPCC965.15|iron/ascorbate oxidoreductase
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 321
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 235 VERIRICLSTMTQQRVAYFYNPD 303
V R+RI T+Q +AYF PD
Sbjct: 246 VHRVRIDPGVKTRQTIAYFVTPD 268
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 20 NKNIPFNTK-STNIISIIRFPKSSSR*LIIIKAVMTFASLLTH 145
N + P N+K N+I +++P+S L K + F++ LTH
Sbjct: 408 NDDSPLNSKIEDNLIDNLKYPQSLDDHLSSKKPISYFSNKLTH 450
>SPCC594.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 489
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -3
Query: 402 HFLMKTILQHETMRHSQPVWFHWMPWTV 319
+FL++ +L+ + H + + F WM W V
Sbjct: 148 NFLLREVLRAKPRYHFKFIVFRWMEWLV 175
>SPBC577.12 |mug71||endoribonuclease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 606
Score = 25.8 bits (54), Expect = 7.1
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 638 SQVLLFSFIAPSNEAPVYIEQKSKRPSNTGQSSPTL 531
S + +++ S +A ++ S+ NTG+SSP L
Sbjct: 476 SLIACLAYVCDSRDADCVVKIWSEYTKNTGESSPVL 511
>SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1098
Score = 25.4 bits (53), Expect = 9.4
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 478 QNVTPQNIQSYSKDLLHYNVGDDCPVFEGLFDFC 579
+ T Q + + K +LH + V + LFDFC
Sbjct: 282 KRATCQQLSNAVKAILHLRSSQNLHVQDALFDFC 315
>SPBP26C9.02c |car1||arginase Car1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 323
Score = 25.4 bits (53), Expect = 9.4
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1
Query: 160 INHARRRPVNEAFNSDSC 213
IN RRRP++ +F+ D+C
Sbjct: 234 INPGRRRPIHLSFDVDAC 251
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,230,902
Number of Sequences: 5004
Number of extensions: 70359
Number of successful extensions: 176
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 175
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 383374054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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