Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0825
         (788 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_12671| Best HMM Match : No HMM Matches (HMM E-Value=.)             130   2e-30
SB_37674| Best HMM Match : No HMM Matches (HMM E-Value=.)             129   2e-30
SB_42294| Best HMM Match : Hist_deacetyl (HMM E-Value=0.00015)        113   2e-25
SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)               56   2e-08
SB_36746| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   8e-04
SB_4910| Best HMM Match : HECT (HMM E-Value=5.8e-33)                   30   2.5  
SB_51094| Best HMM Match : VWA (HMM E-Value=0)                         29   3.2  
SB_33958| Best HMM Match : MAM (HMM E-Value=1.1e-32)                   29   4.3  
SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.3  
SB_32581| Best HMM Match : DUF1017 (HMM E-Value=8.4)                   29   5.7  
SB_22845| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.7  

>SB_12671| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 386

 Score =  130 bits (313), Expect = 2e-30
 Identities = 60/155 (38%), Positives = 94/155 (60%), Gaps = 4/155 (2%)
 Frame = +1

Query: 334 PMKPHRLAVTHCLVLKYGLHK--KMQIYKPYRASAHDMCRFHSEDYIEFLQNVTP--QNI 501
           P    R ++T  L+  YGL K   +++  P +A+A ++  FHS +Y+  ++       + 
Sbjct: 34  PKVTGRASLTSSLIEAYGLLKDRNIRVIAPRKATASELAAFHSSEYVNCMRRAAEAVSDG 93

Query: 502 QSYSKDLLHYNVGDDCPVFEGLFDFCSMYTGASLEGAMKLNNNTCDIAINWSGGLHHAKK 681
               +DL+ + +G DCP FE ++D  SM  GA+L  A  L      +A+NW GG HHA++
Sbjct: 94  SEECEDLVEFGLGYDCPPFEDMYDCVSMIAGATLLAADMLKTGQAKVAVNWQGGWHHAQR 153

Query: 682 FEPSGFCYVNDIVIAILELLKYHPRVLYIDIDVHH 786
            E +GFCY+NDIV+ IL+L + + RVLY+D+DVHH
Sbjct: 154 DEAAGFCYINDIVLGILKLREKYDRVLYVDLDVHH 188


>SB_37674| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 575

 Score =  129 bits (312), Expect = 2e-30
 Identities = 64/125 (51%), Positives = 82/125 (65%)
 Frame = +1

Query: 412 KPYRASAHDMCRFHSEDYIEFLQNVTPQNIQSYSKDLLHYNVGDDCPVFEGLFDFCSMYT 591
           +P++A+  ++ R+HS+DYI+FL+++ P N+  Y+K +                       
Sbjct: 20  RPHKAAMEEITRYHSDDYIKFLKSIRPDNMSDYTKQMQR--------------------- 58

Query: 592 GASLEGAMKLNNNTCDIAINWSGGLHHAKKFEPSGFCYVNDIVIAILELLKYHPRVLYID 771
                GA+KLN    DIAINWSGGLHHAKK E SGFCYVNDIV+AILELLKYH RVLYID
Sbjct: 59  ----SGAVKLNKQHTDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYID 114

Query: 772 IDVHH 786
           ID+HH
Sbjct: 115 IDIHH 119


>SB_42294| Best HMM Match : Hist_deacetyl (HMM E-Value=0.00015)
          Length = 94

 Score =  113 bits (271), Expect = 2e-25
 Identities = 50/60 (83%), Positives = 53/60 (88%)
 Frame = +1

Query: 607 GAMKLNNNTCDIAINWSGGLHHAKKFEPSGFCYVNDIVIAILELLKYHPRVLYIDIDVHH 786
           GA+KLN    DIAINWSGGLHHAKK E SGFCYVNDIV+AILELLKYH RVLYIDID+HH
Sbjct: 2   GAVKLNKQHTDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH 61


>SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)
          Length = 360

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 3/158 (1%)
 Frame = +1

Query: 319 YGPGHPMKPHRLAVTHCLVLKYGLHKKMQIYKPYRASAHDMCRFHSEDYIE-FLQNVTPQ 495
           + P H  K  +       +LK  +    Q+Y+P+ AS  D+ + H+ DY+  FL     +
Sbjct: 70  FPPQHRFKMAKFTKLMEWLLKDNVVIPNQVYRPFFASYDDLIKVHTPDYVRNFLLGTISE 129

Query: 496 NIQSYSKDLLHYNVGDDCPVFEGLFDFCSMYTGASLEGAMKLNNNTCDIAINWSGGLHHA 675
                 +D+         P  EGL     M  G ++  A       C +A +  GG HHA
Sbjct: 130 ------RDMKQIGF----PWSEGLVRRTRMEVGGTILTARIALE--CGLACSTGGGTHHA 177

Query: 676 KKFEPSGFCYVNDIVIAILELLKYH--PRVLYIDIDVH 783
                SGFC  ND+ I    LL  +   RV+ +D+DVH
Sbjct: 178 FPSHGSGFCIFNDLAITASYLLDNNLVTRVMIVDLDVH 215


>SB_36746| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 220

 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 18/25 (72%), Positives = 20/25 (80%)
 Frame = -1

Query: 623 FSFIAPSNEAPVYIEQKSKRPSNTG 549
           FS  APS++APVYIEQKS  P NTG
Sbjct: 191 FSRTAPSSDAPVYIEQKSNNPGNTG 215


>SB_4910| Best HMM Match : HECT (HMM E-Value=5.8e-33)
          Length = 958

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
 Frame = +1

Query: 289 FYNPDVGNFHYGPGHPMKPHRLAVTHCL----VLKYGLHKKMQIY--KPYRASAHDMCRF 450
           +  P   + H+   HP  PH  ++ H L     L+Y       +Y   P+  + H    F
Sbjct: 749 YSTPSNTSLHFAIPHPRTPHYTSLFHTLEHLTTLRYSTPSNTLLYFAIPHPRTPHYTSLF 808

Query: 451 HSEDYIEFLQNVTPQN 498
            +  Y+  L+  TP N
Sbjct: 809 RTLKYLTTLRYSTPSN 824


>SB_51094| Best HMM Match : VWA (HMM E-Value=0)
          Length = 3544

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = +1

Query: 454  SEDYIEFLQNVTPQNIQSYSKDLLHYN--VGDDCPVFEGLFDFCSMYTGASLEGAMKLNN 627
            SE+   ++QN+    IQ Y+   +HY   +  D P+F+  F        A L+   KL  
Sbjct: 2086 SENTYTYMQNIVKSVIQRYNYGRIHYTFIIHGDTPIFKYSFGEQFPSKDAVLKAVSKLPR 2145

Query: 628  NT 633
            +T
Sbjct: 2146 ST 2147


>SB_33958| Best HMM Match : MAM (HMM E-Value=1.1e-32)
          Length = 1052

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = -2

Query: 463  SPRCGNGTYRERWPYTAYISAFSYEDHTSTRDNASQPACVVSLDA-LDRSGNY 308
            +P+  NG  RE W   +Y    +  D+   + +AS    + S DA  D   NY
Sbjct: 933  NPQEANGVKRELWKQVSYKQTTTMRDNPVFKSSASLSHVITSFDAPRDADENY 985


>SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 879

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 259 STMTQQRVAYFYNPDVGNFHYG-PGHPMKPH 348
           ST ++  V+Y +   V N H+G P HP + H
Sbjct: 644 STRSKNSVSYDFKESVQNLHHGLPAHPSEQH 674


>SB_32581| Best HMM Match : DUF1017 (HMM E-Value=8.4)
          Length = 308

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +1

Query: 385 GLHKKMQIYKPYRASAHDMCRFHSEDYIEFLQNVTPQNIQSYSKDLLH 528
           GLH++++I KP R S+  +   H E  ++FL+ +    +    K+L H
Sbjct: 197 GLHQRIKIEKPERESSPPVRVKHDESKLKFLEGLGLVTLDR-KKELTH 243


>SB_22845| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1422

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +1

Query: 385  GLHKKMQIYKPYRASAHDMCRFHSEDYIEFLQNVTPQNIQSYSKDLLH 528
            GLH++++I KP R S+  +   H E  ++FL+ +    +    K+L H
Sbjct: 1311 GLHQRIKIEKPERESSPPVRVKHDESKLKFLEGLGLVTLDR-KKELTH 1357


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,443,117
Number of Sequences: 59808
Number of extensions: 501800
Number of successful extensions: 1233
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)