Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0823
(742 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53793| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 5e-10
SB_33359| Best HMM Match : DGPF (HMM E-Value=2.7) 33 0.24
SB_34627| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_47055| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_11292| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_1031| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_42301| Best HMM Match : Keratin_B2 (HMM E-Value=1.2) 28 6.9
SB_58853| Best HMM Match : SNF (HMM E-Value=0) 28 6.9
SB_42855| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_19535| Best HMM Match : HEAT (HMM E-Value=1.1) 28 9.1
SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_46034| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_13608| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
>SB_53793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 52.8 bits (121), Expect(2) = 5e-10
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = +2
Query: 377 FGFLSVDGEDTRRLFFHMSEVRGNPSELQSGDTVEFVMLTNPRNGKSSACNVVKI 541
FGF+ + E+ + LFFH+SEV N ELQ+GD VEF + R GK SA NV KI
Sbjct: 718 FGFIGHENEEGKNLFFHISEVAEN-VELQAGDEVEF-FVVQKRGGKLSAVNVRKI 770
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = +2
Query: 341 KRRAIVDAIKGVFGFLSVDGEDTRRLFFHMSEVRGNPSELQSGDTVEFVMLTNPRNGKSS 520
+ +V A+K FGF+ D R +FFH SE+ + ++Q GD VEF + + + K
Sbjct: 363 REMGVVAALKDGFGFIRCCDRDAR-MFFHFSELVESSRQIQIGDEVEFSITEDANSMKRV 421
Query: 521 ACNVVKIASKGKV 559
V+I KG +
Sbjct: 422 NAIKVRILPKGTI 434
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Frame = +2
Query: 221 SYEFGIMGLSCKREILQVGDPVTFQADIE-----GRASNIVPIRKKRRAIVDAIKGVFGF 385
S E+GI L K+ +LQ GD V FQ ++ RA + P R++ RA V+++KG
Sbjct: 588 SVEYGITSLIDKKTVLQCGDRVRFQIGVDRETGCKRAMKVTPERQRVRARVESVKGQLS- 646
Query: 386 LSVD 397
LSV+
Sbjct: 647 LSVE 650
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Frame = +2
Query: 275 GDPVTFQADIE-----GRASNIVPIR----KKRRAIVDAIKGVFGFLSVDGEDTRRLFFH 427
GD V F I+ RA +++ + +K + +V ++K FGF+ + +FFH
Sbjct: 172 GDKVQFVVSIDKRTGVSRAKDVMLLETAKAEKYQGVVSSMKESFGFIE-RADKVSEIFFH 230
Query: 428 MSEVRGNPSELQSGDTVEFVMLTNPRN 508
SE + +EL GD VEF++ PRN
Sbjct: 231 YSEFLDDINELTLGDDVEFII--QPRN 255
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +2
Query: 377 FGFLSVDGEDTRRLFFHMSEVRGNPSELQSGDTVEFVMLTNPRNGKSSACNVV 535
+GF+ E R+FFH S+ +G+ +L+ GD VEF + + R+ K A N+V
Sbjct: 66 YGFIQCC-ERELRIFFHYSQYKGDLDDLRIGDEVEFGVSCDQRSKKPVAVNIV 117
Score = 29.1 bits (62), Expect(2) = 5e-10
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 629 RVIAVRTPRGPDGSRGFRPRRPIAE 703
RV+ +R P PDG+RGF +R + +
Sbjct: 771 RVMVIRKPIAPDGTRGFTYQRSLRD 795
>SB_33359| Best HMM Match : DGPF (HMM E-Value=2.7)
Length = 305
Score = 33.1 bits (72), Expect = 0.24
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = -1
Query: 667 SVGAAWSAHSNHSRPCRLLQRSRPEPREKPLWTFTSHFTLARYFNDIASRRLPITRISKH 488
+ AA AH+N PC L R R ++ L+T++ T + YF D +R+ + H
Sbjct: 43 TTNAAVDAHNNRCIPCHRLIRQRXW-KQNLLYTWSLDATFSLYFADAGTRK---KKTKSH 98
Query: 487 HELNSIPRLQLGGITSNLRH 428
+ S +++ S+L+H
Sbjct: 99 PSVASPTTVKVSQKPSDLQH 118
>SB_34627| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1925
Score = 32.3 bits (70), Expect = 0.42
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +2
Query: 29 SLGRLNGSGGGCASA---EYVRVLARGTIPIAKPLE 127
SL RL GS GGC + EY+R +A P+A P+E
Sbjct: 1109 SLLRLTGSKGGCINTDAEEYIRHVAEMAAPVAIPIE 1144
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = -2
Query: 498 LVSITNSTVSPDCNSEGLPRTSDMWKNKRRVSSPSTDKKPKTPFMAST 355
LV I ST S C + P T R S+PST P TP ST
Sbjct: 369 LVDIITSTPSTPC-TPSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPST 415
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -2
Query: 486 TNSTVSPDC--NSEGLPRTSDMWKNKRRVSSPSTDKKPKTPFMAST 355
T ST S C N+ P T M S+PST P TP ST
Sbjct: 266 TPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTPSTPSTPSAPST 311
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -2
Query: 486 TNSTVSPDC--NSEGLPRTSDMWKNKRRVSSPSTDKKPKTPFMAST 355
T ST S C N+ P T M S+PST P TP ST
Sbjct: 816 TPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTPSTPSTPSAPST 861
>SB_47055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 933
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 519 EDFPLRGLVSITNSTVSPDCNSEGLPRTSDMWKNKRRVSSPSTDK 385
E FP+ L + NST+ +C ++G P W +K S P + +
Sbjct: 839 ETFPMSSLTAAYNSTIRLECFTDGRPAPKVTW-SKVGDSQPDSSR 882
>SB_11292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1529
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +2
Query: 29 SLGRLNGSGGGCASA---EYVRVLARGTIPIAKPLE 127
SL RL G+ G C + EY+R +A P+A P+E
Sbjct: 1244 SLSRLTGAKGVCINTDADEYIRHVAEMAAPVAIPIE 1279
>SB_1031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1933
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -1
Query: 697 DGTTRTEASRSVGAAWSAHSNHSRPCRLLQRSRPEPREKPLWTFTSHFTLA 545
D ++ S + +A +A NHSRP R+RP+ ++K +H T A
Sbjct: 1276 DSPGQSAESTASTSADNADGNHSRPSNRRHRNRPQRKKKGKKAAMNHATEA 1326
>SB_42301| Best HMM Match : Keratin_B2 (HMM E-Value=1.2)
Length = 600
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 495 VSITNSTVSPDCNSEGLPRTS 433
VSI + T+SP C+ EGL R S
Sbjct: 265 VSINSDTLSPVCSDEGLSRVS 285
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 495 VSITNSTVSPDCNSEGLPRTS 433
VSI + T+SP C+ EGL R S
Sbjct: 227 VSINSDTLSPLCSDEGLSRVS 247
>SB_58853| Best HMM Match : SNF (HMM E-Value=0)
Length = 905
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 635 SLEALPTPPTKPSGAEREAALDVHFSLYPCSLF*RHCKQKTSHY 504
SL +P PP++ AERE+ + + + L P + R SH+
Sbjct: 555 SLSRIPLPPSEIPLAERESWVSLFYFLKPQKIMVRGLSAVVSHF 598
>SB_42855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 266 LQVGDPVTFQADI--EGRASNIVPIRKKRRAIVDAIKGVFGFLSVDGEDTRRLFFHMSEV 439
++ +PVT ++D+ E + S I +++K + A++ L E RRL +H+ E
Sbjct: 299 IEKSNPVTGESDLALEHKNSEITRLKRKVTNLEAALESKDSLLEQSLEVERRLKYHLDES 358
Query: 440 RGNPSELQS 466
++L S
Sbjct: 359 DSTINDLYS 367
>SB_19535| Best HMM Match : HEAT (HMM E-Value=1.1)
Length = 368
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 449 PSELQSGDTVEFVMLTNPRNGKSSACNVVKIASKGKV 559
P + + V+ V+ T+PR GK N + +S GK+
Sbjct: 204 PVDFMDANVVQRVVATDPRKGKRKLVNDFETSSDGKL 240
>SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 510 PLRGLVSITNSTVSPDCNSEGLPRTSDMW 424
P + L++I T+ C+SEGLP W
Sbjct: 265 PPKSLITIAGETIFLTCSSEGLPSPKIDW 293
>SB_46034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = +1
Query: 370 RCFWLFVCRRRRYS--SFVLPH 429
RC+WLF RRR+ + +LPH
Sbjct: 66 RCYWLFTARRRKLGKRANLLPH 87
>SB_13608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 587
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 680 GSLSIRRGRVECAQQSLEALPTPPTKP 600
G S RG E ++ +E LPTPP P
Sbjct: 490 GDDSFGRGHDESTEEIIELLPTPPGSP 516
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,540,836
Number of Sequences: 59808
Number of extensions: 537699
Number of successful extensions: 1818
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1779
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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