Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0823
         (742 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ...    28   6.0  
Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
            protein Y51B11A.1 protein.
          Length = 1079

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
 Frame = -2

Query: 495  VSITNSTVSPDCNSEGLPR-----TSDMWKNKRRVSSPSTDKKPKTPF 367
            V  T +TV  DC+   + R     T++ W+NKR +   S D   +T F
Sbjct: 947  VQTTTTTVPCDCSLSYIDRVVYPFTTEWWENKRDIIIQSYDSPRRTAF 994


>Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical
           protein C09F9.2 protein.
          Length = 1642

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
 Frame = -1

Query: 730 DQDVSLGQQFCDGTTRTEASRSVGAAWSAHSNHSRP-CRLLQRSRPEPR--EKPLWTFTS 560
           D+DV +   FCD T   E +    + W+       P C  +  + P P   EKP  T   
Sbjct: 373 DEDVCVPFDFCDKTVENEETCEANSTWAKCGTACEPTCANMYDTAPCPASCEKPGCTCAD 432

Query: 559 HF 554
           ++
Sbjct: 433 NY 434


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,802,334
Number of Sequences: 27780
Number of extensions: 385107
Number of successful extensions: 1408
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1408
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)