Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0822
         (830 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    26   0.32 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    26   0.32 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    26   0.32 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    26   0.42 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   1.7  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   5.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.9  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    21   9.1  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 19/55 (34%), Positives = 24/55 (43%)
 Frame = -3

Query: 507 LRGLVSITNSTVSPDCNSEGLPRTSDMWKNKRRVSSPSTDKKPKTPFMASTMARR 343
           L  +  ITNST+ P   S   PR          +SSPS+ K     F+  T A R
Sbjct: 49  LNAISQITNSTLDPGRKSPSSPR----------ISSPSSTKSGSPGFLTYTKADR 93


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -2

Query: 328  HYVTGPSLYVSLKSYWITNLQNLT 257
            +YVT PS+Y+ L  Y + N+ N++
Sbjct: 1008 YYVTVPSMYLLLVIYSVFNMNNVS 1031


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -2

Query: 328  HYVTGPSLYVSLKSYWITNLQNLT 257
            +YVT PS+Y+ L  Y + N+ N++
Sbjct: 1008 YYVTVPSMYLLLVIYSVFNMNNVS 1031


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 25.8 bits (54), Expect = 0.42
 Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
 Frame = -3

Query: 480 STVSPDCNSEGLPRTSDMWKNKRRVS-SPSTDKKPKTP 370
           S  + +C ++G PR    WK    VS     D KP  P
Sbjct: 714 SDAAVECKADGFPRPVVTWKRATGVSPGDYKDFKPNNP 751


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 349 TSLLSNWHYVTGPSLYVSLKSYW 281
           TS L++W  +T P  Y+ + + W
Sbjct: 425 TSALASWSPLTNPKQYMEIFARW 447


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = -3

Query: 495 VSITNSTVSPDCNSEGLPRTSDMWKNKRRVSSPS-TDKKPKTPF-MASTMARRF 340
           VS++N+   P  +        + WK  R   SP+ T  K K  + + S  A  F
Sbjct: 61  VSVSNTNTEPLLSEALTNLPGEKWKEMRATLSPAFTSSKIKNMYSLISECAENF 114


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 192 EYWA*SGFRARKVLVTVPF 136
           ++W   GF   K+++ VPF
Sbjct: 401 KFWTKKGFPKSKIVLGVPF 419


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -3

Query: 156 VLVTVPFRVGSSGF 115
           VLVTV +R+G  GF
Sbjct: 105 VLVTVNYRLGMLGF 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,607
Number of Sequences: 336
Number of extensions: 4253
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)