Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0822
         (830 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0043 - 3444713-3444811,3445077-3445137,3446042-3446090,344...    32   0.64 
03_06_0074 - 31476094-31476215,31477803-31478238,31478438-314784...    31   1.5  
06_03_0256 - 18841627-18841993,18842087-18842415,18842512-188427...    29   4.5  
09_06_0280 + 22010270-22011407,22011890-22013097                       29   6.0  
01_06_1355 + 36610390-36610479,36611906-36612063,36612144-366125...    29   6.0  
11_01_0597 + 4769748-4770166,4770263-4770545,4770725-4771360           28   7.9  
02_05_0246 + 27136590-27138610,27138933-27139056,27139401-271396...    28   7.9  
01_01_0827 + 6443319-6446085,6446317-6446407,6446502-6448017,644...    28   7.9  

>09_02_0043 -
           3444713-3444811,3445077-3445137,3446042-3446090,
           3446703-3447054,3448231-3448359,3449550-3449555
          Length = 231

 Score = 31.9 bits (69), Expect = 0.64
 Identities = 15/54 (27%), Positives = 32/54 (59%)
 Frame = +2

Query: 374 VFGFLSVDGEDTRRLFFHMSEVRGNPSELQSGDTVEFVMLTNPRNGKSSACNVV 535
           ++G+++V  +  + L + ++  R NP  ++ GD +E   +T P+ G S  C+V+
Sbjct: 15  LYGYIAVRDDLDKLLNYVVNYSRDNPIIMRQGDLIE---MTGPKRGISMCCSVL 65


>03_06_0074 -
           31476094-31476215,31477803-31478238,31478438-31478485,
           31478569-31479018,31479567-31479681,31480052-31480905
          Length = 674

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 19/60 (31%), Positives = 26/60 (43%)
 Frame = -3

Query: 216 PPST*IKPEYWA*SGFRARKVLVTVPFRVGSSGFAIGIVPRAKTRTYSALAQPPPEPFRR 37
           PPS+  KP        + R  L T+P     +G A       +TRT ++   PPP P  R
Sbjct: 36  PPSSSRKPPLPPRRSPQKRPGLPTIPENGPPAGMATATATPKRTRTPTSTCAPPPPPHAR 95


>06_03_0256 -
           18841627-18841993,18842087-18842415,18842512-18842749,
           18844091-18844373,18844773-18844989,18845067-18845360
          Length = 575

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = -3

Query: 501 GLVSITNSTVSPDCNSEGLPRTSDMWKNKRRVSSPSTDKKPKTPFMAS 358
           G+V++TN+ +S D ++        M ++KR V+ P     P +P  AS
Sbjct: 158 GIVNLTNTVLSDDVSNPSTQSAETMGRSKREVAPP----PPPSPSQAS 201


>09_06_0280 + 22010270-22011407,22011890-22013097
          Length = 781

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = -2

Query: 469 PRLQLGGITSNLRHVEEQTTSIFAVDRQKAKNTFYGVNNGTSLLSNWHYVTGPS 308
           PRL +G  T  +  +    +++ AVD   A N  Y V +GT+    W  V   S
Sbjct: 77  PRLMIGNSTLQVVSISLANSTLRAVDIAGAVNITYDVVSGTTGNGTWGGVAATS 130


>01_06_1355 +
           36610390-36610479,36611906-36612063,36612144-36612523,
           36612600-36613583,36614228-36614292,36614946-36615024,
           36615480-36615529,36616595-36616781,36617922-36617957,
           36619226-36619348,36619466-36620386,36620506-36620636
          Length = 1067

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -2

Query: 658 AAWS-AHSNHSRPCRLLQRSRPEPREKPL 575
           +AW  A  NH+ P  +LQ + P+P  KPL
Sbjct: 567 SAWFWASGNHADPAHILQLASPDPIFKPL 595


>11_01_0597 + 4769748-4770166,4770263-4770545,4770725-4771360
          Length = 445

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +1

Query: 64  CKR*IRPCFGSRYYTYCEAARTN 132
           C R   PC G R YTY +A R N
Sbjct: 85  CYRSGDPCTGKRNYTYMDAVRAN 107


>02_05_0246 +
           27136590-27138610,27138933-27139056,27139401-27139694,
           27139776-27139978,27140307-27140589
          Length = 974

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 16/30 (53%), Positives = 18/30 (60%)
 Frame = -3

Query: 135 RVGSSGFAIGIVPRAKTRTYSALAQPPPEP 46
           R  SS  A G + RAKTR  S L  PPP+P
Sbjct: 264 RCTSSSTAAGHLMRAKTR--SRLMDPPPQP 291


>01_01_0827 + 6443319-6446085,6446317-6446407,6446502-6448017,
            6448164-6448243,6449045-6449129,6449221-6449312,
            6449388-6449456,6449544-6449580,6449662-6449744,
            6450427-6450873,6450978-6451014,6451101-6451158,
            6451243-6451382,6451610-6451675,6451794-6451908,
            6453261-6453299,6453482-6453543
          Length = 1927

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -3

Query: 525  QAEDFPLRGLVSITNSTVSPDCNSEGLPRTSD 430
            +AED  L G+VS  NST+S   +S+ L   SD
Sbjct: 1069 EAEDGSLEGVVSSENSTISSQNSSDYLFHMSD 1100


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,963,617
Number of Sequences: 37544
Number of extensions: 533684
Number of successful extensions: 2059
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2057
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)