Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0822
         (830 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical pr...    28   7.1  
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ...    28   7.1  

>Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical
           protein C09F9.2 protein.
          Length = 1642

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 9/84 (10%)
 Frame = -2

Query: 778 NYVHSCKMFRSCC--GLV----DQDVSLGQQFCDGTTRTEASRSVGAAWSAHSNHSRP-C 620
           N  +SC   R  C  G V    D+DV +   FCD T   E +    + W+       P C
Sbjct: 351 NCPNSCGTPRCICKEGFVRMANDEDVCVPFDFCDKTVENEETCEANSTWAKCGTACEPTC 410

Query: 619 RLLQRSRPEPR--EKPLWTFTSHF 554
             +  + P P   EKP  T   ++
Sbjct: 411 ANMYDTAPCPASCEKPGCTCADNY 434


>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
            protein Y51B11A.1 protein.
          Length = 1079

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
 Frame = -3

Query: 495  VSITNSTVSPDCNSEGLPR-----TSDMWKNKRRVSSPSTDKKPKTPF 367
            V  T +TV  DC+   + R     T++ W+NKR +   S D   +T F
Sbjct: 947  VQTTTTTVPCDCSLSYIDRVVYPFTTEWWENKRDIIIQSYDSPRRTAF 994


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,665,844
Number of Sequences: 27780
Number of extensions: 428833
Number of successful extensions: 1542
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1542
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)