Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0821
         (751 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q67WR0 Cluster: Fibroin heavy chain-like; n=4; Oryza sa...    33   7.5  

>UniRef50_Q67WR0 Cluster: Fibroin heavy chain-like; n=4; Oryza
           sativa|Rep: Fibroin heavy chain-like - Oryza sativa
           subsp. japonica (Rice)
          Length = 518

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 45/161 (27%), Positives = 67/161 (41%), Gaps = 1/161 (0%)
 Frame = -2

Query: 585 GGFYCSSVS-DGNSLNTGSVGQAFGFNSAGDXXXXXXXXXXXXXXXXGIFPRGSLSSLNV 409
           GG    S+S  G+S ++GS G ++G + AG                 G    G+ SS + 
Sbjct: 269 GGSSSGSMSGSGSSSSSGSTGMSYGSSGAGSFSGSSSGSNSNAGSMSGA-NSGAGSSSSA 327

Query: 408 SDASCIQSSGIRDRLSLSGPSGSFGDAGPLXXXXXXXXXXXGLHGLCILDGTELSGPDSC 229
             AS   S+ + D  S SG   + G +G                G     GT +SG D+ 
Sbjct: 328 YGASGSGSNSMSDSGSSSGSVSASG-SGSSNSGAGSGSSSSSWSGSNSGSGT-MSGIDAP 385

Query: 228 SIVQCCSTAESRSGSNYSRSCDSNGGRPANVRSSHS*ASKT 106
           S     STAES SGS  S +  ++G   +   +S+S +  T
Sbjct: 386 SSTGTSSTAESNSGSATSVTGANSGSYSSAWSNSNSNSGST 426


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,533,640
Number of Sequences: 1657284
Number of extensions: 7193500
Number of successful extensions: 22390
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 20623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22359
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)