Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0821
         (751 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281     33   0.24 
12_01_0017 - 127617-127775,127920-128000,128284-128395,128486-12...    32   0.42 
11_01_0017 - 129261-129335,129352-129426,129565-129645,129929-13...    30   2.3  
06_02_0015 + 10599131-10600248,10601009-10602752                       29   5.2  
02_01_0690 - 5152224-5152386,5152490-5152687,5152815-5153014,515...    28   9.1  

>06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281
          Length = 518

 Score = 33.1 bits (72), Expect = 0.24
 Identities = 45/161 (27%), Positives = 67/161 (41%), Gaps = 1/161 (0%)
 Frame = -2

Query: 585 GGFYCSSVS-DGNSLNTGSVGQAFGFNSAGDXXXXXXXXXXXXXXXXGIFPRGSLSSLNV 409
           GG    S+S  G+S ++GS G ++G + AG                 G    G+ SS + 
Sbjct: 269 GGSSSGSMSGSGSSSSSGSTGMSYGSSGAGSFSGSSSGSNSNAGSMSGA-NSGAGSSSSA 327

Query: 408 SDASCIQSSGIRDRLSLSGPSGSFGDAGPLXXXXXXXXXXXGLHGLCILDGTELSGPDSC 229
             AS   S+ + D  S SG   + G +G                G     GT +SG D+ 
Sbjct: 328 YGASGSGSNSMSDSGSSSGSVSASG-SGSSNSGAGSGSSSSSWSGSNSGSGT-MSGIDAP 385

Query: 228 SIVQCCSTAESRSGSNYSRSCDSNGGRPANVRSSHS*ASKT 106
           S     STAES SGS  S +  ++G   +   +S+S +  T
Sbjct: 386 SSTGTSSTAESNSGSATSVTGANSGSYSSAWSNSNSNSGST 426


>12_01_0017 -
           127617-127775,127920-128000,128284-128395,128486-129538,
           129617-129705,130136-130309,130566-130687,130790-130924,
           131132-131494,131561-131728,131850-131889
          Length = 831

 Score = 32.3 bits (70), Expect = 0.42
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = -2

Query: 282 LHGLCILDGTELSGPDSCSIVQCCSTAESRSGSNYSRSCDSNGGRPANVRSSHS 121
           L+ +C    TE    DSC +   CS++E   GSN + SC S+ G   N  +S S
Sbjct: 459 LNAICC-SSTE-PAEDSCFLKVICSSSEPSVGSNLTTSCISSPGCTPNDLNSQS 510


>11_01_0017 -
           129261-129335,129352-129426,129565-129645,129929-130040,
           130131-131177,131256-131347,131773-131943,132150-132253,
           132367-132501,132583-132724,132803-133059,133126-133337,
           133417-133454
          Length = 846

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 237 DSCSIVQCCSTAESRSGSNYSRSCDSNGGRPANVRSSHS 121
           DSC +   CS++E   G N + SC S+ G   N  +S S
Sbjct: 490 DSCFLKVICSSSEPTVGRNLTTSCISSPGCTPNDLNSQS 528


>06_02_0015 + 10599131-10600248,10601009-10602752
          Length = 953

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +2

Query: 587 VSPTRLELRLPPWLLVQLRP 646
           V P  LE RLPPWLL    P
Sbjct: 725 VVPATLEHRLPPWLLALFEP 744


>02_01_0690 -
           5152224-5152386,5152490-5152687,5152815-5153014,
           5153122-5153223,5153414-5153550,5153688-5153798,
           5156092-5156344,5157954-5158052,5158449-5158739
          Length = 517

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +2

Query: 605 ELRLPPWLLVQLRPRL*LMPSLETPVLWKVLFWW 706
           E+R+P W  V +   + L+ S+ TP  + +LF+W
Sbjct: 373 EVRIPKWGCVYIPTIITLLNSVGTPRSFHLLFFW 406


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,033,015
Number of Sequences: 37544
Number of extensions: 224533
Number of successful extensions: 770
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)