Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0821
         (751 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         26   1.4  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         26   1.4  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    26   1.4  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   5.8  
AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein ...    23   7.6  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 12/36 (33%), Positives = 13/36 (36%)
 Frame = -1

Query: 745 GTEPASSDQSSPHPPKQHLPKHRRF*RRHQLQPGPE 638
           G  PA       HP    LP H       Q QP P+
Sbjct: 85  GPMPAQPPHHHQHPHHHQLPHHPHHQHHPQQQPSPQ 120



 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -3

Query: 80  DCSARESLTAPSPRASY 30
           DCS ++S +APSP A+Y
Sbjct: 259 DCSTQDSTSAPSP-ATY 274


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 12/36 (33%), Positives = 13/36 (36%)
 Frame = -1

Query: 745 GTEPASSDQSSPHPPKQHLPKHRRF*RRHQLQPGPE 638
           G  PA       HP    LP H       Q QP P+
Sbjct: 85  GPMPAQPPHHHQHPHHHQLPHHPHHQHHPQQQPSPQ 120



 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -3

Query: 80  DCSARESLTAPSPRASY 30
           DCS ++S +APSP A+Y
Sbjct: 259 DCSTQDSTSAPSP-ATY 274


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -2

Query: 282  LHGLCILDGTELSGPDSCSIVQCCSTAESRSG-SNYSRSCDSNGGRPANVRSSHS 121
            + G+ +  GT +   + CS   C ST+ S S  S++S S  ++ G  A +    S
Sbjct: 1068 VRGVRLGSGTLVGALNRCSNGSCSSTSSSHSNHSSHSSSSSNSAGSWAGMGKQES 1122


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 320 RGPASPKLPLGPDKLKRSR 376
           RGP+ P  PLGP   K  R
Sbjct: 581 RGPSGPSGPLGPQGEKGDR 599


>AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein
           protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -2

Query: 585 GGFYCSSVSDGNSLNTGSVGQAFGFNS 505
           GG   S+ S GNS N  +    FGFNS
Sbjct: 27  GGDGSSANSTGNSDNNSAGVPDFGFNS 53


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,254
Number of Sequences: 2352
Number of extensions: 7452
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)