BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0817 (734 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC2C4.13 |vma16||V-type ATPase subunit c''|Schizosaccharomyces... 164 1e-41 SPAC1B3.14 |vma3||V-type ATPase subunit c|Schizosaccharomyces po... 75 1e-14 SPAC732.01 |vma11||V-type ATPase proteolipid subunit|Schizosacch... 70 4e-13 SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pom... 30 0.39 SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|ch... 30 0.39 SPCC16C4.18c |taf50||histone H4-like TAF |Schizosaccharomyces po... 29 0.52 SPBC691.03c |apl3||AP-2 adaptor complex subunit Alp3 |Schizosacc... 27 2.1 SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 27 2.1 SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 27 2.8 SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 26 4.8 SPAC1A6.09c |lag1||sphingosine N-acyltransferase Lag1|Schizosacc... 26 6.4 >SPAC2C4.13 |vma16||V-type ATPase subunit c''|Schizosaccharomyces pombe|chr 1|||Manual Length = 199 Score = 164 bits (399), Expect = 1e-41 Identities = 86/181 (47%), Positives = 107/181 (59%) Frame = +2 Query: 176 IFSLYYVLNGKGEQISLGWFLENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGG 355 I LY + + GE G FL +TSPY WG LGIA VA ++GAA GI G SI+GG Sbjct: 17 IVGLYMLFHNSGESFDFGSFLLDTSPYTWGLLGIASCVAFGIIGAAWGIFICGTSILGGA 76 Query: 356 VKAPRIKTKNLISVIFCEAVAIYGLITAIVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFG 535 VKAPRIKTKNLIS+IFCE VAIY LI AIV S K ++ + + ++ G+ +F Sbjct: 77 VKAPRIKTKNLISIIFCEVVAIYSLIIAIVFSA---KINDINPAGFYTKSHYYTGFALFW 133 Query: 536 AGLAVGLVNLFCXXXXXXXXXXXXXXXXXXXXXFVKILIVEIFGSAIGLFGLIVGIYMTS 715 G+ VGL NL C FVK+L+VEIFGS +GLFGLIVG+ + Sbjct: 134 GGITVGLCNLICGVCVGITGSSAALADAQDASLFVKVLVVEIFGSVLGLFGLIVGLLIGG 193 Query: 716 K 718 K Sbjct: 194 K 194 >SPAC1B3.14 |vma3||V-type ATPase subunit c|Schizosaccharomyces pombe|chr 1|||Manual Length = 161 Score = 74.9 bits (176), Expect = 1e-14 Identities = 43/153 (28%), Positives = 73/153 (47%) Frame = +2 Query: 260 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 439 +G +G ++ + GAA G GV I GV P + KN I V+ +AIYGL+ + Sbjct: 13 FGVMGCTAAIVFASFGAAYGTAKAGVGISAMGVLRPDLIVKNTIPVVMAGIIAIYGLVVS 72 Query: 440 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCXXXXXXXXXXXXXXXX 619 +++SG L++ + +G++ GAGL+VGL L Sbjct: 73 VLISGNLKQILSLY-----------SGFIQLGAGLSVGLAGLAAGFAIGIVGDAGVRGTA 121 Query: 620 XXXXXFVKILIVEIFGSAIGLFGLIVGIYMTSK 718 FV ++++ IF +GL+GLIV + + ++ Sbjct: 122 QQPRLFVAMILILIFAEVLGLYGLIVALLLNTR 154 >SPAC732.01 |vma11||V-type ATPase proteolipid subunit|Schizosaccharomyces pombe|chr 1|||Manual Length = 162 Score = 69.7 bits (163), Expect = 4e-13 Identities = 42/153 (27%), Positives = 71/153 (46%) Frame = +2 Query: 260 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 439 +G G+ S+ S +GA G G I G P I K+LI V+ + +YGL+ + Sbjct: 13 FGFAGVCASMVFSCLGAGYGTALAGRGIAAVGAFRPEIVMKSLIPVVMSGIIGVYGLVMS 72 Query: 440 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCXXXXXXXXXXXXXXXX 619 ++++G + P S+ +G++ AGLAVGL + Sbjct: 73 VLIAGDMS----PDNDYSL-----FSGFIHLSAGLAVGLTGVAAGYAIGVVGDRGVQSFM 123 Query: 620 XXXXXFVKILIVEIFGSAIGLFGLIVGIYMTSK 718 FV ++++ IF +GL+GLIVG+ + +K Sbjct: 124 RQDRIFVSMVLILIFAEVLGLYGLIVGLILQTK 156 >SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pombe|chr 3|||Manual Length = 1188 Score = 29.9 bits (64), Expect = 0.39 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = -2 Query: 631 GSVGSIR*SSTRAHDTNSNSTE*IHQANSESSAEHHV-SRHPVL 503 GSV + SS R + T +NS S+AE+HV SRH V+ Sbjct: 830 GSVSDVSFSSIRVNIAGVKITAKSSTSNSSSTAEYHVRSRHAVI 873 >SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|chr 1|||Manual Length = 644 Score = 29.9 bits (64), Expect = 0.39 Identities = 19/63 (30%), Positives = 34/63 (53%) Frame = -2 Query: 712 CHINANNKAKKTNGRSKNLNDEDLDEQGSVGSIR*SSTRAHDTNSNSTE*IHQANSESSA 533 C+ N+++ +TNG S + N+ + + S S + + + +D+ SNS E I +SS Sbjct: 46 CNGNSHSLKHETNGASSSNNN--VAKSSSHDSFK-AKPKNYDSTSNSNEPISFNEPDSSN 102 Query: 532 EHH 524 HH Sbjct: 103 SHH 105 >SPCC16C4.18c |taf50||histone H4-like TAF |Schizosaccharomyces pombe|chr 3|||Manual Length = 452 Score = 29.5 bits (63), Expect = 0.52 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = +2 Query: 128 YFLSYLFVLLVGLAIPIF-SLYYVLNGKGEQISLGWFLENTSPY 256 Y L L L+G+ F ++YY L + + +L FL+NT PY Sbjct: 302 YALRDLAAFLLGIVCDRFGNVYYTLKPRVTRTALKAFLDNTKPY 345 >SPBC691.03c |apl3||AP-2 adaptor complex subunit Alp3 |Schizosaccharomyces pombe|chr 2|||Manual Length = 878 Score = 27.5 bits (58), Expect = 2.1 Identities = 21/69 (30%), Positives = 32/69 (46%) Frame = +2 Query: 185 LYYVLNGKGEQISLGWFLENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKA 364 L + LN K ++ + S + WG S+AL++VGA GI G VG ++ Sbjct: 785 LTFGLNSKDRKLDAKRLTKIVSGFHWGICQNVDSIALNIVGA--GIIRFGTQNVGCLLRI 842 Query: 365 PRIKTKNLI 391 +NLI Sbjct: 843 EPNYEQNLI 851 >SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosaccharomyces pombe|chr 1|||Manual Length = 990 Score = 27.5 bits (58), Expect = 2.1 Identities = 16/58 (27%), Positives = 28/58 (48%) Frame = -2 Query: 448 EHDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGD 275 E D++ +N A +G +L+ DS +++ +S VD+H S N KG+ Sbjct: 22 EQDAASVKINSTR-ASPNGSDLLNDDSEAAKITTNEKQSSPVDSHNESPNDTTINKGE 78 >SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosaccharomyces pombe|chr 1|||Manual Length = 1168 Score = 27.1 bits (57), Expect = 2.8 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = -2 Query: 703 NANNKAKKTNGRSKNLNDEDLDEQ 632 N NN + NG S +L+ +D+D+Q Sbjct: 84 NVNNGSNSVNGASHDLDSKDVDKQ 107 >SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosaccharomyces pombe|chr 2|||Manual Length = 2358 Score = 26.2 bits (55), Expect = 4.8 Identities = 10/36 (27%), Positives = 23/36 (63%) Frame = +2 Query: 95 TKYLNQNLKMRYFLSYLFVLLVGLAIPIFSLYYVLN 202 + ++N+N+ +R ++S++ + +A SLY+ LN Sbjct: 2008 SSFINENMYLRLWISHIASWIYAVASASGSLYFSLN 2043 >SPAC1A6.09c |lag1||sphingosine N-acyltransferase Lag1|Schizosaccharomyces pombe|chr 1|||Manual Length = 390 Score = 25.8 bits (54), Expect = 6.4 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +2 Query: 413 VAIYGLITAIVLSGMLEKYSEPFTSVSVKQQNWMAG 520 ++I + A +LS L Y+EPF +S KQ + G Sbjct: 74 LSIIAICFACLLSPSLRPYAEPFIFLSYKQPDGSYG 109 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,007,852 Number of Sequences: 5004 Number of extensions: 64066 Number of successful extensions: 237 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 220 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 231 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 347244562 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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