Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0816
         (781 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0)                42   6e-04
SB_17026| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.4  
SB_26083| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.2  
SB_8658| Best HMM Match : SCP (HMM E-Value=3e-20)                      29   3.2  
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.2  
SB_27526| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-08)                 29   5.6  
SB_38444| Best HMM Match : TMS_TDE (HMM E-Value=0)                     28   7.4  
SB_2198| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.4  
SB_42523| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.8  
SB_23326| Best HMM Match : PH (HMM E-Value=1.9e-11)                    28   9.8  

>SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0)
          Length = 2532

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 59/234 (25%), Positives = 97/234 (41%), Gaps = 13/234 (5%)
 Frame = +1

Query: 28   QANITNCNEF--PPSLERHIRNIIIK-EGYTKYSVDKREICTNGGNYLASLYEIDIKGTT 198
            ++++T    F  PP   + +   I+   GY + S    +   + GN+L SL E+D+ G T
Sbjct: 1224 KSDVTEIRSFAKPPRAVQMVSECIVALRGYKEISWKSAKAMMSEGNFLKSLTEMDVDGIT 1283

Query: 199  QKGKKETNIFIKKMKPGENSMKIISIPEAYKFE-TFAYEELLKVYTELQ-NEAKVPADER 372
                K+    +K+M      MK +S   A  F+   A      V  E++    KV   ER
Sbjct: 1284 TGQVKKCRDMLKEMNTTVEEMKEVSKAGAGLFKFVIAVMGYCSVAREIKPKREKVARLER 1343

Query: 373  --FKAVKDFGEFDAQAIILENLAK---KGYKTAHRMDVVSLEYAEMAIKQLAKFHALSFA 537
                + ++  + + +   LE   +   K Y  A R      E AE+  ++L     L   
Sbjct: 1344 NFHLSKRELEKIEKELKALEEELERLGKQYDDAMREKSSLQEEAEIMERRLIAADKLISG 1403

Query: 538  LRERKPEYYESKIKTIPSRLN-LGNEWNG--FVKSMQALTLNFLNDNLRKKVEN 690
            L   K  + +        R+  LG+   G  F+  + A T +F  D LRK+ EN
Sbjct: 1404 LGSEKIRWTKDLQDLKDQRVRLLGDCLLGAAFLSYLGAFTWDFRRDMLRKQWEN 1457


>SB_17026| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 453

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
 Frame = +1

Query: 163 ASLYEIDIKGTTQKGKKETNIFIKKMKPGENSMKIISIPEAYKFETFAYEELLKVYTELQ 342
           ASL+    K + +   +E+N+F K  K  + S+  ++    +  ET   +E L    EL 
Sbjct: 49  ASLFRKSEK-SKEVSHRESNLFRKNKKVRKYSIGKVT----FSGETKKLKEYLT--RELA 101

Query: 343 NEAKVPADERFKAVKDFGEFDAQAIILENLAKK--GYKTAHRMDVVSL 480
           +     AD+ FK+V+ F EF+   + +++   K   YK A    V  L
Sbjct: 102 SSGWRLADQEFKSVQVFSEFECARLCVDDPRCKSANYKEAAEQSVCQL 149


>SB_26083| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 624

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 23/76 (30%), Positives = 37/76 (48%)
 Frame = +1

Query: 283 AYKFETFAYEELLKVYTELQNEAKVPADERFKAVKDFGEFDAQAIILENLAKKGYKTAHR 462
           A KF    + ELLK  T++      P D + K+ K      A++  LEN  K+ ++  H 
Sbjct: 125 AGKFLGEKFLELLKKSTKVVRPDDHP-DRQTKSKKKRRSLSAKS--LENNEKQSHRAVHG 181

Query: 463 MDVVSLEYAEMAIKQL 510
            + +SLE     +K+L
Sbjct: 182 KEAISLEEEATQVKKL 197


>SB_8658| Best HMM Match : SCP (HMM E-Value=3e-20)
          Length = 273

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +1

Query: 1   EKSFVRENFQANITNCNEFPPSLERHIRNIIIKEGYTKYSVDKREICTNGGNY 159
           EKS+VR  ++AN+    ++  SL  H       +G   YS D      + GN+
Sbjct: 96  EKSWVRARYKANVIEVGQYQLSLSGHEPIDKWYDGSKNYSFDNPGFKRDAGNF 148


>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1601

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 268 ISIPEAYKFETFAYEELLKVYTELQNEAKVPADERFKAV 384
           +SIP   +  + A E+L  V T L+N+   P D +F  +
Sbjct: 160 VSIPMKVRLTSVANEQLETVVTSLKNDESFPTDVQFSGL 198


>SB_27526| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-08)
          Length = 326

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 8/34 (23%), Positives = 19/34 (55%)
 Frame = -2

Query: 210 FSFLCCTFYVDFVKRSEIVSTICAYFSFIYTIFS 109
           F+  C   Y+  + R ++ + +C+ F F + +F+
Sbjct: 8   FAVFCVPMYLSILSRVQLSAWLCSMFGFFFALFA 41


>SB_38444| Best HMM Match : TMS_TDE (HMM E-Value=0)
          Length = 1031

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
 Frame = +3

Query: 141 HKWWK--LSRFALRNRHKRY--NTKRKKRNEHFH*ENEAGR 251
           HK++K  + +F+   RHK    N K + +NEH   ENE  +
Sbjct: 866 HKYYKENIEKFSPEKRHKNLKGNEKVEAKNEHTQKENELNK 906


>SB_2198| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 962

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 205 GKKETNIFIKKMKPGENSMKIISIPEAYKFETFAY 309
           G K  ++   K K GE  +K +S+P  Y    +AY
Sbjct: 449 GSKYYHVVYSKFKLGEEVVKEVSVPPTYDRNLYAY 483


>SB_42523| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 259

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +1

Query: 112 KYSVDKREICTNGGNYLASLYEIDIKGTTQKGKKETNIFIKKMKP 246
           KYS  KR I  NG     + YE+ + GT    KK+ N    +  P
Sbjct: 138 KYSTAKRVIFQNG-----NFYELTMLGTRPISKKDNNFIYSESSP 177


>SB_23326| Best HMM Match : PH (HMM E-Value=1.9e-11)
          Length = 618

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +3

Query: 141 HKWWKLSRFALRNRHKRYNTKRKKRNEHFH*E 236
           HK WK   F LR + KR NT    R E++H E
Sbjct: 111 HKVWKRKWFVLRRKSKRGNT----RLEYYHSE 138


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,420,440
Number of Sequences: 59808
Number of extensions: 414042
Number of successful extensions: 1165
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1164
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2131907602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)