BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0816
(781 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF588654-1|ABQ96840.1| 176|Anopheles gambiae transposase protein. 25 3.5
EF588651-1|ABQ96838.1| 176|Anopheles gambiae transposase protein. 25 3.5
EF588628-1|ABQ96818.1| 176|Anopheles gambiae transposase protein. 23 8.0
DQ437579-1|ABD96049.1| 575|Anopheles gambiae short neuropeptide... 23 8.0
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 23 8.0
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 23 8.0
>EF588654-1|ABQ96840.1| 176|Anopheles gambiae transposase
protein.
Length = 176
Score = 24.6 bits (51), Expect = 3.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 14 FVKIFKQT*PTVTNFLRHL 70
F+K+FK T T +N RHL
Sbjct: 27 FLKVFKYTKGTTSNLKRHL 45
>EF588651-1|ABQ96838.1| 176|Anopheles gambiae transposase
protein.
Length = 176
Score = 24.6 bits (51), Expect = 3.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 14 FVKIFKQT*PTVTNFLRHL 70
F+K+FK T T +N RHL
Sbjct: 27 FLKVFKYTKGTTSNLKRHL 45
>EF588628-1|ABQ96818.1| 176|Anopheles gambiae transposase
protein.
Length = 176
Score = 23.4 bits (48), Expect = 8.0
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 17 VKIFKQT*PTVTNFLRHL 70
+K+FK T T++N RHL
Sbjct: 28 LKVFKYTKGTISNLKRHL 45
>DQ437579-1|ABD96049.1| 575|Anopheles gambiae short neuropeptide F
receptor protein.
Length = 575
Score = 23.4 bits (48), Expect = 8.0
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 655 FLNDNLRKKVENILP 699
+LNDN RK+ + +LP
Sbjct: 382 WLNDNFRKEFKQVLP 396
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 23.4 bits (48), Expect = 8.0
Identities = 26/113 (23%), Positives = 47/113 (41%)
Frame = +1
Query: 265 IISIPEAYKFETFAYEELLKVYTELQNEAKVPADERFKAVKDFGEFDAQAIILENLAKKG 444
++ IP+ K ET +L+ + ++ K + E K E A+ E + +
Sbjct: 633 LVEIPKQEKLETVP-AFVLRACSIMEKSQK--SGEGVKTSAKLAEEAAER--RERMERLE 687
Query: 445 YKTAHRMDVVSLEYAEMAIKQLAKFHALSFALRERKPEYYESKIKTIPSRLNL 603
T +++ + + + L K+ L +RE K EY SKI I R +
Sbjct: 688 AMTTAQIEQENTQMINDLYRLLKKYTGLRNLIRELKSEYGNSKIYPIFPRYTM 740
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 23.4 bits (48), Expect = 8.0
Identities = 26/113 (23%), Positives = 47/113 (41%)
Frame = +1
Query: 265 IISIPEAYKFETFAYEELLKVYTELQNEAKVPADERFKAVKDFGEFDAQAIILENLAKKG 444
++ IP+ K ET +L+ + ++ K + E K E A+ E + +
Sbjct: 633 LVEIPKQEKLETVP-AFVLRACSIMEKSQK--SGEGVKTSAKLAEEAAER--RERMERLE 687
Query: 445 YKTAHRMDVVSLEYAEMAIKQLAKFHALSFALRERKPEYYESKIKTIPSRLNL 603
T +++ + + + L K+ L +RE K EY SKI I R +
Sbjct: 688 AMTTAQIEQENTQMINDLYRLLKKYTGLRNLIRELKSEYGNSKIYPIFPRYTM 740
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,459
Number of Sequences: 2352
Number of extensions: 15339
Number of successful extensions: 228
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -