Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0816
         (781 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23176-5|AAX88833.1|  241|Caenorhabditis elegans Hypothetical pr...    30   1.6  
U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical p...    29   2.8  
U00036-13|ABC71803.1|  479|Caenorhabditis elegans Hypothetical p...    29   2.8  
AF143150-1|AAD37916.1|  222|Caenorhabditis elegans heat shock pr...    29   2.8  
AF022981-10|AAG24203.1|  360|Caenorhabditis elegans Serpentine r...    29   2.8  
Z75550-2|CAA99928.2|  421|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z50177-3|CAA90545.2|  765|Caenorhabditis elegans Hypothetical pr...    29   4.9  
AL110485-22|CAB60371.1|  399|Caenorhabditis elegans Hypothetical...    28   6.5  
Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical pr...    28   8.6  
Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical pr...    28   8.6  
Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical pr...    28   8.6  
U39667-6|AAC69011.2|  640|Caenorhabditis elegans Disorganized mu...    28   8.6  
AY095447-1|AAM23316.1|  640|Caenorhabditis elegans DIM-1(L) prot...    28   8.6  
AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding c...    28   8.6  

>U23176-5|AAX88833.1|  241|Caenorhabditis elegans Hypothetical
           protein F21H12.7 protein.
          Length = 241

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 544 ERKPEYYESKIKTIPSRLNLGNEWNGFVKSMQALTLNFLNDNL 672
           E    YY S+   +    N GN++  + + MQA++LN L+D +
Sbjct: 117 ESNAAYYISQTGFLEFYCNYGNDFVAYYECMQAISLNDLSDTI 159


>U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical
           protein R151.7a protein.
          Length = 672

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = +1

Query: 73  RHIRNIIIKEGYTKYSVDKREICTNGGNYLASLYEIDIKGTTQKGKKETNIFIKKMK 243
           R++ +I+ K  Y+   V  RE+ +N  + L      ++KG   +G  E  I   K K
Sbjct: 52  RNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAELKGDVAEGPSEIRITTNKDK 108


>U00036-13|ABC71803.1|  479|Caenorhabditis elegans Hypothetical
           protein R151.7b protein.
          Length = 479

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = +1

Query: 73  RHIRNIIIKEGYTKYSVDKREICTNGGNYLASLYEIDIKGTTQKGKKETNIFIKKMK 243
           R++ +I+ K  Y+   V  RE+ +N  + L      ++KG   +G  E  I   K K
Sbjct: 52  RNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAELKGDVAEGPSEIRITTNKDK 108


>AF143150-1|AAD37916.1|  222|Caenorhabditis elegans heat shock
           protein 75 protein.
          Length = 222

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = +1

Query: 73  RHIRNIIIKEGYTKYSVDKREICTNGGNYLASLYEIDIKGTTQKGKKETNIFIKKMK 243
           R++ +I+ K  Y+   V  RE+ +N  + L      ++KG   +G  E  I   K K
Sbjct: 52  RNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAELKGDVAEGPSEIRITTNKDK 108


>AF022981-10|AAG24203.1|  360|Caenorhabditis elegans Serpentine
           receptor, class h protein82 protein.
          Length = 360

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -2

Query: 318 QFFIGKCFEFICFWY*Y-NFHTIFARLHFLNENVRFFFSFLCCTFYVDFVKRS 163
           +FF       +C    Y  F  +F  L  L+E  +  F  LCC++Y+ F K S
Sbjct: 192 EFFTASGVYVVCIDEGYIKFLALFTVLGTLSEICQMAFFVLCCSYYLFFSKSS 244


>Z75550-2|CAA99928.2|  421|Caenorhabditis elegans Hypothetical
           protein T22C1.3 protein.
          Length = 421

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 25/76 (32%), Positives = 35/76 (46%)
 Frame = -3

Query: 506 CLIAISAYSKDTTSIL*AVLYPFFAKFSSMIA*ASNSPKSFTALNLSSAGTLASFCSSVY 327
           C I I A+S  T       +YPF    S ++  ++ S   F +L L SA T  +F    Y
Sbjct: 181 CAILIGAWSSFT-------IYPFIL-ISCLVFRSNGSIVKFLSLVLVSALTTITFVGINY 232

Query: 326 TFNNSS*ANVSNLYAS 279
             NN S   +  +YAS
Sbjct: 233 LLNNQSLNFLGPVYAS 248


>Z50177-3|CAA90545.2|  765|Caenorhabditis elegans Hypothetical
           protein F46G10.5 protein.
          Length = 765

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = -2

Query: 237 FLNENVRFFFSFLCCTFYVDFVKRSEIVSTICAYFSFIYTIFSIAFLNYNIS 82
           F+   V FFFS L C F +  +    IV+ I    SFI +     F  Y+I+
Sbjct: 199 FVLFGVLFFFSRLFCQFTIFRIVFLWIVAIIAPILSFITSFAIYNFFGYSIT 250


>AL110485-22|CAB60371.1|  399|Caenorhabditis elegans Hypothetical
           protein Y46G5A.28 protein.
          Length = 399

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +1

Query: 283 AYKFETFAYE--ELLKVYTELQNEAKVPADERFKAVKDFGEFD 405
           A+K+E  A E  +LLK + ++  E +VP +   + V    +FD
Sbjct: 68  AWKYEEIAQEMPQLLKEFVQIAKEKRVPEEFMVRLVTSLMDFD 110


>Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical
           protein C48B4.4c protein.
          Length = 1704

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
 Frame = -2

Query: 255 IFARLHFLNENVRFFFSFLC----CTFYVDFVKRSEIVSTICAY--FSFIYTIFSIAFLN 94
           +F   H +   ++FF  FLC     TF ++FV  + ++ T+  Y   + I+  F  +F N
Sbjct: 300 MFYAAHVVMAFLKFFVIFLCSIIPLTFVMEFVSPAALIVTVLMYGLGAVIFGAFVASFFN 359


>Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical
           protein C48B4.4b protein.
          Length = 1691

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
 Frame = -2

Query: 255 IFARLHFLNENVRFFFSFLC----CTFYVDFVKRSEIVSTICAY--FSFIYTIFSIAFLN 94
           +F   H +   ++FF  FLC     TF ++FV  + ++ T+  Y   + I+  F  +F N
Sbjct: 300 MFYAAHVVMAFLKFFVIFLCSIIPLTFVMEFVSPAALIVTVLMYGLGAVIFGAFVASFFN 359


>Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical
           protein C48B4.4a protein.
          Length = 1689

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
 Frame = -2

Query: 255 IFARLHFLNENVRFFFSFLC----CTFYVDFVKRSEIVSTICAY--FSFIYTIFSIAFLN 94
           +F   H +   ++FF  FLC     TF ++FV  + ++ T+  Y   + I+  F  +F N
Sbjct: 300 MFYAAHVVMAFLKFFVIFLCSIIPLTFVMEFVSPAALIVTVLMYGLGAVIFGAFVASFFN 359


>U39667-6|AAC69011.2|  640|Caenorhabditis elegans Disorganized
           muscle protein 1,isoform a protein.
          Length = 640

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 26/87 (29%), Positives = 40/87 (45%)
 Frame = +1

Query: 7   SFVRENFQANITNCNEFPPSLERHIRNIIIKEGYTKYSVDKREICTNGGNYLASLYEIDI 186
           +F+ +N Q  +T   E P   E  +R  ++K   T+  + K+    NG N     Y   +
Sbjct: 73  TFISQNQQKGMT---EKPKHSEYFLR--LMK---TRQEMQKKLTAKNGSNKSVQQYLRKL 124

Query: 187 KGTTQKGKKETNIFIKKMKPGENSMKI 267
             +T K   E  I   KMKP +NS+ I
Sbjct: 125 PPSTSK---EVTIIPVKMKPDDNSVYI 148


>AY095447-1|AAM23316.1|  640|Caenorhabditis elegans DIM-1(L)
           protein.
          Length = 640

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 26/87 (29%), Positives = 40/87 (45%)
 Frame = +1

Query: 7   SFVRENFQANITNCNEFPPSLERHIRNIIIKEGYTKYSVDKREICTNGGNYLASLYEIDI 186
           +F+ +N Q  +T   E P   E  +R  ++K   T+  + K+    NG N     Y   +
Sbjct: 73  TFISQNQQKGMT---EKPKHSEYFLR--LMK---TRQEMQKKLTAKNGSNKSVQQYLRKL 124

Query: 187 KGTTQKGKKETNIFIKKMKPGENSMKI 267
             +T K   E  I   KMKP +NS+ I
Sbjct: 125 PPSTSK---EVTIIPVKMKPDDNSVYI 148


>AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding
           cassette transporter protein.
          Length = 1704

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
 Frame = -2

Query: 255 IFARLHFLNENVRFFFSFLC----CTFYVDFVKRSEIVSTICAY--FSFIYTIFSIAFLN 94
           +F   H +   ++FF  FLC     TF ++FV  + ++ T+  Y   + I+  F  +F N
Sbjct: 300 MFYAAHVVMAFLKFFVIFLCSIIPLTFVMEFVSPAALIVTVLMYGLGAVIFGAFVASFFN 359


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,628,269
Number of Sequences: 27780
Number of extensions: 343287
Number of successful extensions: 1104
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)