Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0815
(602 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21730| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_45010| Best HMM Match : Chromadorea_ALT (HMM E-Value=7.3) 31 0.54
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10) 29 2.2
SB_19621| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_3364| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 28 6.7
SB_22485| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_56992| Best HMM Match : Copper-bind (HMM E-Value=0.82) 27 8.8
SB_59326| Best HMM Match : FtsX (HMM E-Value=2.2) 27 8.8
SB_26731| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_21730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 32
Score = 31.9 bits (69), Expect = 0.41
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 481 LLGQLENSGPPPLPRDQLAALPQEILTE 564
LL QLE +GPPP D++ LP+ +T+
Sbjct: 1 LLNQLEGAGPPPAENDKIENLPKVKVTQ 28
>SB_45010| Best HMM Match : Chromadorea_ALT (HMM E-Value=7.3)
Length = 214
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 199 ESEADGDFDDADMSNLDDDRQAPPPML 279
E + DG+ DD D SN DDD A PP++
Sbjct: 102 EDDDDGNDDDDDDSNDDDDDSAVPPVV 128
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +1
Query: 442 VFGGEGLDAVVTQLLGQLENSGPPPLPRDQLAALPQEILTEDHAAKG 582
VF GE A+ +LLGQ + G PP PR +PQ +T D A G
Sbjct: 248 VFQGEREMAIDNKLLGQFQLVGIPPAPR----GVPQVEVTFDIDANG 290
>SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10)
Length = 416
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/60 (21%), Positives = 28/60 (46%)
Frame = -2
Query: 277 ALVVVPGDHRPSCSYLHRQNHHPLHSPIAL*NH*HNMGMYNPAKHLQILYHTCGRKTVVL 98
+++++ H PS S + +HHP S I + H H + I++H ++++
Sbjct: 148 SIIIIHHHHHPSSSIIIIHHHHPSSSSIIIIIHHHPSSIIIHHPSSSIIHHHPSSSSIII 207
>SB_19621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 27.9 bits (59), Expect = 6.7
Identities = 9/20 (45%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 366 GSREAGHWCYNCWCTIC-TC 422
GS + ++CY+C C +C TC
Sbjct: 364 GSEKIAYFCYDCECLVCKTC 383
>SB_3364| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = -3
Query: 264 CLAIIVQVAHICIVKITIRFTLQLLYKTTSTIWACIILQNIFKFYITPVAEKP*C-WSSF 88
C+AI A + K +F + +Y IW + IF+ +IT + C W +
Sbjct: 104 CIAIERWYAVVMPTKYKAKFGRRRIYGYIGLIWLSASITEIFELFITKLGSDGRCRWVTP 163
Query: 87 YHCVSHVKLINTTAPINTYYLNSI 16
++ V+ T+Y+ S+
Sbjct: 164 FYGVTLENAFVVLHITITFYIPSV 187
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +1
Query: 442 VFGGEGLDAVVTQLLGQLENSGPPPLPRDQLAALPQEILTEDHAAKG 582
VF GE LLG+ E +G PP PR +PQ +T D A G
Sbjct: 444 VFEGERSMTAHNNLLGKFELTGIPPAPR----GVPQIEVTFDIDANG 486
>SB_22485| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 519
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +1
Query: 124 CDIEFEDVLQDYTCPYCASGFIEQLESEADGDFDDAD 234
CD E + D+TC G + Q+ S+ D +D
Sbjct: 466 CDCEKSLIADDFTCESKIEGLLNQINSDVQSDLLGSD 502
>SB_56992| Best HMM Match : Copper-bind (HMM E-Value=0.82)
Length = 1642
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 127 DIEFEDVLQDYTCPYCASGFIEQLESEADGDFDDAD 234
DI+ V + TC A E+ +DGDFDDAD
Sbjct: 1189 DIKDCMVGNEETCESSAVENFERKSCNSDGDFDDAD 1224
>SB_59326| Best HMM Match : FtsX (HMM E-Value=2.2)
Length = 238
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -3
Query: 252 IVQVAHICIVKITIRFTLQLLY-KTTSTIWACIILQNIFKFYIT 124
I+ + I I+ ITI FT+ ++ TT+TI II+ NI IT
Sbjct: 141 IIIIIIIIIIIITIIFTIIIIITTTTTTIIIIIIIINIIIIIIT 184
>SB_26731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 127 DIEFEDVLQDYTCPYCAS-GFIEQLESEADGDFDDADMSNLDDDRQAPPPMLNDL 288
++E D+L CP + L+ +A DD + +LDD P L+D+
Sbjct: 40 ELETGDILHILLCPVSHHISVVPSLDYQALPSLDDQALPSLDDHHTPDVPSLDDI 94
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,899,655
Number of Sequences: 59808
Number of extensions: 365717
Number of successful extensions: 1415
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1403
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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