BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0815 (602 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g56580.2 68416.m06292 zinc finger (C3HC4-type RING finger) fa... 47 1e-05 At3g56580.1 68416.m06291 zinc finger (C3HC4-type RING finger) fa... 47 1e-05 At1g55530.1 68414.m06353 zinc finger (C3HC4-type RING finger) fa... 46 1e-05 At2g40830.3 68415.m05041 zinc finger (C3HC4-type RING finger) fa... 43 2e-04 At2g40830.2 68415.m05040 zinc finger (C3HC4-type RING finger) fa... 43 2e-04 At2g40830.1 68415.m05039 zinc finger (C3HC4-type RING finger) fa... 43 2e-04 At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger) fa... 39 0.002 At5g01980.1 68418.m00117 zinc finger (C3HC4-type RING finger) fa... 39 0.003 At4g26400.2 68417.m03800 zinc finger (C3HC4-type RING finger) fa... 39 0.003 At4g26400.1 68417.m03799 zinc finger (C3HC4-type RING finger) fa... 39 0.003 At1g60360.1 68414.m06796 zinc finger (C3HC4-type RING finger) fa... 35 0.036 At3g13430.1 68416.m01688 zinc finger (C3HC4-type RING finger) fa... 34 0.083 At2g25380.1 68415.m03039 zinc finger protein-related very low si... 34 0.083 At3g46620.1 68416.m05061 zinc finger (C3HC4-type RING finger) fa... 31 0.44 At4g03820.2 68417.m00529 expressed protein 31 0.59 At4g03820.1 68417.m00528 expressed protein 31 0.59 At1g68180.1 68414.m07788 zinc finger (C3HC4-type RING finger) fa... 29 1.8 At1g05120.1 68414.m00514 SNF2 domain-containing protein / helica... 29 1.8 At2g29910.2 68415.m03633 F-box family protein contains F-box dom... 29 2.4 At2g29910.1 68415.m03632 F-box family protein contains F-box dom... 29 2.4 At2g39720.1 68415.m04874 zinc finger (C3HC4-type RING finger) fa... 29 3.1 At1g55380.1 68414.m06334 DC1 domain-containing protein contains ... 28 4.1 At5g59550.1 68418.m07462 zinc finger (C3HC4-type RING finger) fa... 28 5.5 At5g49230.1 68418.m06094 drought-responsive family protein simil... 27 7.2 At5g19090.2 68418.m02270 heavy-metal-associated domain-containin... 27 7.2 At5g19090.1 68418.m02269 heavy-metal-associated domain-containin... 27 7.2 At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2 (HS... 27 7.2 At3g19950.1 68416.m02525 zinc finger (C3HC4-type RING finger) fa... 27 7.2 At1g79190.1 68414.m09233 expressed protein 27 7.2 At5g61080.1 68418.m07664 expressed protein predicted proteins, A... 27 9.6 At1g74760.1 68414.m08662 zinc finger (C3HC4-type RING finger) fa... 27 9.6 At1g18910.1 68414.m02354 zinc finger (C3HC4-type RING finger) fa... 27 9.6 >At3g56580.2 68416.m06292 zinc finger (C3HC4-type RING finger) family protein contains INTERPRO domain, IPR001841, RING finger Length = 320 Score = 46.8 bits (106), Expect = 1e-05 Identities = 48/182 (26%), Positives = 72/182 (39%), Gaps = 19/182 (10%) Frame = +1 Query: 112 FCHRCDIEFEDVLQDYTCPYCASGFIEQLE---SEADGDFD-DADMSNLDDDRQAPPPML 279 +CHRC +D C YC GF+E+++ S A D + D ++ L Sbjct: 9 WCHRCQRAVWLRARDAVCSYCGGGFVEEIDIGPSRAHRDVERDPTFDLMEAFSAFMRSRL 68 Query: 280 NDLAF-LMTGGRYRNTGRRD-TILEQLLWM--MXXXXXXXXXXXXXXXFVLVGAPG---- 435 + ++ GR + G + L LL FV APG Sbjct: 69 AERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSSVEAFVNGAAPGIGIA 128 Query: 436 ------DYVFGGEGLDAVVTQLLGQLENSGPPPLPRDQLAALPQEILTEDH-AAKGTACS 594 DY F G GL+ ++ QL + GPPP P+ + ALP +T+ H + + C Sbjct: 129 RGTNAGDYFF-GPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIKITQKHLKSSDSHCP 187 Query: 595 VC 600 VC Sbjct: 188 VC 189 >At3g56580.1 68416.m06291 zinc finger (C3HC4-type RING finger) family protein contains INTERPRO domain, IPR001841, RING finger Length = 320 Score = 46.8 bits (106), Expect = 1e-05 Identities = 48/182 (26%), Positives = 72/182 (39%), Gaps = 19/182 (10%) Frame = +1 Query: 112 FCHRCDIEFEDVLQDYTCPYCASGFIEQLE---SEADGDFD-DADMSNLDDDRQAPPPML 279 +CHRC +D C YC GF+E+++ S A D + D ++ L Sbjct: 9 WCHRCQRAVWLRARDAVCSYCGGGFVEEIDIGPSRAHRDVERDPTFDLMEAFSAFMRSRL 68 Query: 280 NDLAF-LMTGGRYRNTGRRD-TILEQLLWM--MXXXXXXXXXXXXXXXFVLVGAPG---- 435 + ++ GR + G + L LL FV APG Sbjct: 69 AERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSSVEAFVNGAAPGIGIA 128 Query: 436 ------DYVFGGEGLDAVVTQLLGQLENSGPPPLPRDQLAALPQEILTEDH-AAKGTACS 594 DY F G GL+ ++ QL + GPPP P+ + ALP +T+ H + + C Sbjct: 129 RGTNAGDYFF-GPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIKITQKHLKSSDSHCP 187 Query: 595 VC 600 VC Sbjct: 188 VC 189 >At1g55530.1 68414.m06353 zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger) Length = 351 Score = 46.4 bits (105), Expect = 1e-05 Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Frame = +1 Query: 85 VERRPTLRFFCHRCDIEFEDVLQ-DYTCPYCASGFIEQLESEADGDFDDADMSNLDDDRQ 261 +E R++CH C V++ + CP+C SGF+E++E D D D +D +++ + Sbjct: 1 MEEAVVTRYWCHMCSQTVNPVMEAEIKCPFCQSGFVEEMED--DDDHDSSDPADVRANNS 58 Query: 262 APPPMLNDL 288 P+L +L Sbjct: 59 LWAPILMEL 67 >At2g40830.3 68415.m05041 zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger) Length = 328 Score = 42.7 bits (96), Expect = 2e-04 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = +1 Query: 424 GAPGDYVFGGEGLDAVVTQLLGQLENSGPPPLPRDQLAALPQEILTEDH-AAKGTACSVC 600 G GDY FG GL+ + QL GPPP PR + ALP + + H + + C VC Sbjct: 135 GNTGDYFFG-PGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVC 193 Score = 34.3 bits (75), Expect = 0.063 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +1 Query: 112 FCHRCDIEFEDVLQDYTCPYCASGFIEQLESEADGDFD 225 +CHRC Q+ C YC GF+E+L+ FD Sbjct: 9 WCHRCQRAVRLHGQEPVCFYCGGGFVEELDMAQASPFD 46 >At2g40830.2 68415.m05040 zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger) Length = 328 Score = 42.7 bits (96), Expect = 2e-04 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = +1 Query: 424 GAPGDYVFGGEGLDAVVTQLLGQLENSGPPPLPRDQLAALPQEILTEDH-AAKGTACSVC 600 G GDY FG GL+ + QL GPPP PR + ALP + + H + + C VC Sbjct: 135 GNTGDYFFG-PGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVC 193 Score = 34.3 bits (75), Expect = 0.063 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +1 Query: 112 FCHRCDIEFEDVLQDYTCPYCASGFIEQLESEADGDFD 225 +CHRC Q+ C YC GF+E+L+ FD Sbjct: 9 WCHRCQRAVRLHGQEPVCFYCGGGFVEELDMAQASPFD 46 >At2g40830.1 68415.m05039 zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger) Length = 328 Score = 42.7 bits (96), Expect = 2e-04 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = +1 Query: 424 GAPGDYVFGGEGLDAVVTQLLGQLENSGPPPLPRDQLAALPQEILTEDH-AAKGTACSVC 600 G GDY FG GL+ + QL GPPP PR + ALP + + H + + C VC Sbjct: 135 GNTGDYFFG-PGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVC 193 Score = 34.3 bits (75), Expect = 0.063 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +1 Query: 112 FCHRCDIEFEDVLQDYTCPYCASGFIEQLESEADGDFD 225 +CHRC Q+ C YC GF+E+L+ FD Sbjct: 9 WCHRCQRAVRLHGQEPVCFYCGGGFVEELDMAQASPFD 46 >At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger) Length = 396 Score = 39.1 bits (87), Expect = 0.002 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = +1 Query: 85 VERRPTLRFFCHRCDIEFEDVLQ-DYTCPYCASGFIEQLESEADG 216 +E R++CH C V++ + CP+C SGFIE++ G Sbjct: 1 MEETMAARYWCHMCSQMVNPVMESEIKCPFCQSGFIEEMSGNGGG 45 >At5g01980.1 68418.m00117 zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger) Length = 493 Score = 38.7 bits (86), Expect = 0.003 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Frame = +1 Query: 433 GDYVFGGEGLDAVVTQLLGQLENS--GPPPLPRDQLAALPQEILTEDHAAKGTACSVC 600 GDY+ G D ++ QL + +NS G PP + LP+ I+ E+H KG C++C Sbjct: 298 GDYL-DERGFDELLEQL-AESDNSRRGAPPASVSCVRNLPRVIIAEEHVMKGLVCAIC 353 >At4g26400.2 68417.m03800 zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger) Length = 356 Score = 38.7 bits (86), Expect = 0.003 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = +1 Query: 106 RFFCHRCDIEFEDVL-QDYTCPYCASGFIEQLESEADG 216 R++CH C V+ + CP+C SGF+E++ E +G Sbjct: 4 RYWCHMCSQMVNPVIGAEIKCPFCQSGFVEEMSREING 41 >At4g26400.1 68417.m03799 zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger) Length = 356 Score = 38.7 bits (86), Expect = 0.003 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = +1 Query: 106 RFFCHRCDIEFEDVL-QDYTCPYCASGFIEQLESEADG 216 R++CH C V+ + CP+C SGF+E++ E +G Sbjct: 4 RYWCHMCSQMVNPVIGAEIKCPFCQSGFVEEMSREING 41 >At1g60360.1 68414.m06796 zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger) Length = 327 Score = 35.1 bits (77), Expect = 0.036 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = +1 Query: 436 DYVFGGEGLDAVVTQLLGQLENSGPPPLPRDQLAALPQEILTEDHAAKG-TACSVC 600 DY G L+ ++ QL Q + GPPP + +LP +T H + C+VC Sbjct: 173 DYFTGASSLEQLIEQLT-QDDRPGPPPASEPTINSLPSVKITPQHLTNDMSQCTVC 227 >At3g13430.1 68416.m01688 zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger) Length = 315 Score = 33.9 bits (74), Expect = 0.083 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +1 Query: 109 FFCHRCDIEFEDVLQD--YTCPYCASGFIEQLESEADGDFDDA 231 ++CH C ++QD C +C SGF+E++++ D D+ Sbjct: 9 YWCHMCSRSVIPLIQDEIIKCNFCQSGFVEEMDNNDDHQAADS 51 >At2g25380.1 68415.m03039 zinc finger protein-related very low similarity to SP|O95376 Ariadne-2 protein homolog (ARI-2) (Triad1 protein) {Homo sapiens}; contains Pfam profile PF01485: IBR (In Between Ring fingers) domain Length = 350 Score = 33.9 bits (74), Expect = 0.083 Identities = 21/48 (43%), Positives = 28/48 (58%) Frame = +1 Query: 112 FCHRCDIEFEDVLQDYTCPYCASGFIEQLESEADGDFDDADMSNLDDD 255 FC+ C IE++ QD TCP SG E +AD D DD D+ + +DD Sbjct: 305 FCYGCGIEWKKN-QD-TCP---SGCREMGHGDADSDDDDDDVDDDEDD 347 >At3g46620.1 68416.m05061 zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger) Length = 395 Score = 31.5 bits (68), Expect = 0.44 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 5/43 (11%) Frame = +1 Query: 100 TLRFFCHRCDI-----EFEDVLQDYTCPYCASGFIEQLESEAD 213 T ++C+ C E +D CPYC GFIE++E ++ Sbjct: 28 TTSYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSN 70 Score = 27.5 bits (58), Expect = 7.2 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 7/57 (12%) Frame = +1 Query: 451 GEGLDAVVTQLLGQLE-------NSGPPPLPRDQLAALPQEILTEDHAAKGTACSVC 600 G G + ++ QL Q+E SG PP + + +LP+ +++ H C+VC Sbjct: 163 GSGFERLLEQL-SQIEASGNGIGRSGNPPASKSAIESLPRVEISDCHTKAEANCAVC 218 >At4g03820.2 68417.m00529 expressed protein Length = 453 Score = 31.1 bits (67), Expect = 0.59 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = -3 Query: 270 WWCLAIIVQVAHICIVKIT--IRFTLQL---LYKTTSTIWACIILQNIFKFYITPVAEKP 106 WW + Q+ +I ++ + TLQL LY+T+ I ACI+ QNI + + E Sbjct: 158 WWYASGFNQIPYIINPTLSHVLACTLQLSSWLYRTSLFIIACILYQNICHLQVLRLDEFA 217 Query: 105 *CWSS 91 C++S Sbjct: 218 RCFAS 222 >At4g03820.1 68417.m00528 expressed protein Length = 437 Score = 31.1 bits (67), Expect = 0.59 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = -3 Query: 270 WWCLAIIVQVAHICIVKIT--IRFTLQL---LYKTTSTIWACIILQNIFKFYITPVAEKP 106 WW + Q+ +I ++ + TLQL LY+T+ I ACI+ QNI + + E Sbjct: 158 WWYASGFNQIPYIINPTLSHVLACTLQLSSWLYRTSLFIIACILYQNICHLQVLRLDEFA 217 Query: 105 *CWSS 91 C++S Sbjct: 218 RCFAS 222 >At1g68180.1 68414.m07788 zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger) Length = 248 Score = 29.5 bits (63), Expect = 1.8 Identities = 10/32 (31%), Positives = 18/32 (56%) Frame = +1 Query: 505 GPPPLPRDQLAALPQEILTEDHAAKGTACSVC 600 GPPP + + A+ I+T++ K C++C Sbjct: 110 GPPPASQSAIEAVRTVIITDEDLVKEKVCAIC 141 >At1g05120.1 68414.m00514 SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein similar to SP|P79051 DNA repair protein rhp16 (RAD16 homolog) {Schizosaccharomyces pombe}; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00097: Zinc finger, C3HC4 type (RING finger) Length = 833 Score = 29.5 bits (63), Expect = 1.8 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = +1 Query: 94 RPTLRFFCHRCDIEFEDVLQDYTCPYC 174 RP +FC CD D + +CP+C Sbjct: 409 RPYSYYFCKDCDCRILDYVAHQSCPHC 435 >At2g29910.2 68415.m03633 F-box family protein contains F-box domain Pfam:PF00646 Length = 335 Score = 29.1 bits (62), Expect = 2.4 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = +1 Query: 190 EQLESEADGDFDDADMSNLDDDRQAPPPMLNDLAFLMTG 306 E+L E G + D D S DD+ P+L D+ L+TG Sbjct: 260 ERLRDEKAGGYGDCD-SVYDDEEYPDDPILGDVTNLVTG 297 >At2g29910.1 68415.m03632 F-box family protein contains F-box domain Pfam:PF00646 Length = 352 Score = 29.1 bits (62), Expect = 2.4 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = +1 Query: 190 EQLESEADGDFDDADMSNLDDDRQAPPPMLNDLAFLMTG 306 E+L E G + D D S DD+ P+L D+ L+TG Sbjct: 260 ERLRDEKAGGYGDCD-SVYDDEEYPDDPILGDVTNLVTG 297 >At2g39720.1 68415.m04874 zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger) Length = 401 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/53 (24%), Positives = 24/53 (45%) Frame = +1 Query: 109 FFCHRCDIEFEDVLQDYTCPYCASGFIEQLESEADGDFDDADMSNLDDDRQAP 267 ++C+ C F V +CP C GF+E ++ D D+ + ++P Sbjct: 6 YWCYSCS-RFVWVSDSISCPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSP 57 >At1g55380.1 68414.m06334 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain Length = 661 Score = 28.3 bits (60), Expect = 4.1 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = +1 Query: 199 ESEADGDFDDADMSNLDDD 255 E E DGD DD D S+ DDD Sbjct: 127 ECEDDGDDDDGDSSDSDDD 145 >At5g59550.1 68418.m07462 zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger) Length = 407 Score = 27.9 bits (59), Expect = 5.5 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 7/57 (12%) Frame = +1 Query: 451 GEGLDAVVTQLLGQLE-------NSGPPPLPRDQLAALPQEILTEDHAAKGTACSVC 600 G G + ++ QL Q+E SG PP + + +LP+ +++ H C+VC Sbjct: 147 GSGFERLLEQL-SQIEASATGIGRSGNPPASKSAIESLPRVEISDCHIGSEANCAVC 202 >At5g49230.1 68418.m06094 drought-responsive family protein similar to drought-induced mRNA, Di19 [Arabidopsis thaliana] gi|469110|emb|CAA55321 Length = 211 Score = 27.5 bits (58), Expect = 7.2 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = +1 Query: 43 WCSCIN*FNMADAMVERRPTLRFFCHRCDIEFEDVLQ-DYTCPYCASGF 186 W +C F+ + + RR R + D+E ED L+ ++ CP+CA F Sbjct: 6 WINCPPVFSSSPS--SRRYQSRSDLYLGDVEGEDDLKAEFMCPFCADEF 52 >At5g19090.2 68418.m02270 heavy-metal-associated domain-containing protein contains Pfam heavy-metal-associated domain PF00403; glycine-rich protein GRP22, rape, PIR:S31415; isoform contains a non-consensus TG-acceptor splice site at intron 3 Length = 465 Score = 27.5 bits (58), Expect = 7.2 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = +1 Query: 184 FIEQLESEADGDFDDADMSNLDDDRQAPPPMLNDLAFLMTGG 309 F ++ + E D D D+ D DD+ PP N + +M GG Sbjct: 223 FSDEFDDEFDEDDDEFDDDLEDDEFDDHPPPPNKMKPMMGGG 264 >At5g19090.1 68418.m02269 heavy-metal-associated domain-containing protein contains Pfam heavy-metal-associated domain PF00403; glycine-rich protein GRP22, rape, PIR:S31415; isoform contains a non-consensus TG-acceptor splice site at intron 3 Length = 587 Score = 27.5 bits (58), Expect = 7.2 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = +1 Query: 184 FIEQLESEADGDFDDADMSNLDDDRQAPPPMLNDLAFLMTGG 309 F ++ + E D D D+ D DD+ PP N + +M GG Sbjct: 223 FSDEFDDEFDEDDDEFDDDLEDDEFDDHPPPPNKMKPMMGGG 264 >At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2 (HSC70-2) (HSP70-2) identical to SP|P22954 Heat shock cognate 70 kDa protein 2 (Hsc70.2) {Arabidopsis thaliana} Length = 653 Score = 27.5 bits (58), Expect = 7.2 Identities = 14/28 (50%), Positives = 15/28 (53%) Frame = +1 Query: 442 VFGGEGLDAVVTQLLGQLENSGPPPLPR 525 VF GE LLG+ E SG PP PR Sbjct: 448 VFEGERARTKDNNLLGKFELSGIPPAPR 475 >At3g19950.1 68416.m02525 zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger) Length = 328 Score = 27.5 bits (58), Expect = 7.2 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Frame = +1 Query: 109 FFCHRCDIEFEDVLQ---DYTCPYCASGFIEQLE 201 FFC++C+ + D CP C GF+E+ E Sbjct: 21 FFCYQCNQTVTISISSSADPFCPICNQGFLEEYE 54 >At1g79190.1 68414.m09233 expressed protein Length = 1274 Score = 27.5 bits (58), Expect = 7.2 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = -2 Query: 358 RVTVRGLYLFYLCFGTDLPSSGMLN 284 +V + G+ +F LC G D SSG L+ Sbjct: 739 QVIIEGVGVFSLCLGKDFASSGFLH 763 >At5g61080.1 68418.m07664 expressed protein predicted proteins, Arabidopsis thaliana; expression supported by MPSS Length = 348 Score = 27.1 bits (57), Expect = 9.6 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +1 Query: 181 GFIEQLESEADGDFDDADMSNLDDDRQAPPP 273 G + + S+ D DFDD + ++D D + P Sbjct: 125 GLVPETASQIDNDFDDGGVVDMDLDNECLTP 155 >At1g74760.1 68414.m08662 zinc finger (C3HC4-type RING finger) family protein contains Pfam domain PF00097: Zinc finger, C3HC4 type (RING finger) Length = 255 Score = 27.1 bits (57), Expect = 9.6 Identities = 9/23 (39%), Positives = 15/23 (65%) Frame = +1 Query: 106 RFFCHRCDIEFEDVLQDYTCPYC 174 ++FC C + ++D + Y CPYC Sbjct: 87 KYFCKICKL-YDDERKIYHCPYC 108 >At1g18910.1 68414.m02354 zinc finger (C3HC4-type RING finger) family protein contains Pfam domain PF00097: Zinc finger, C3HC4 type (RING finger) Length = 195 Score = 27.1 bits (57), Expect = 9.6 Identities = 9/23 (39%), Positives = 15/23 (65%) Frame = +1 Query: 106 RFFCHRCDIEFEDVLQDYTCPYC 174 +++C C + F+D + Y CPYC Sbjct: 27 KYYCKICKL-FDDDREIYHCPYC 48 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,284,512 Number of Sequences: 28952 Number of extensions: 244438 Number of successful extensions: 860 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 801 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 858 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1197101088 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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