Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0814
(808 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30506| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_55814| Best HMM Match : zf-AD (HMM E-Value=1.9) 29 5.9
SB_35838| Best HMM Match : NCD3G (HMM E-Value=0.032) 29 5.9
SB_51188| Best HMM Match : RVT_1 (HMM E-Value=4.5e-24) 28 7.7
SB_42160| Best HMM Match : RVT_1 (HMM E-Value=0) 28 7.7
SB_29894| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_5197| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_1766| Best HMM Match : Nodulin_late (HMM E-Value=7.2) 28 7.7
SB_56283| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_52705| Best HMM Match : RnaseA (HMM E-Value=1.4) 28 7.7
SB_49391| Best HMM Match : Gal_Lectin (HMM E-Value=2.6e-05) 28 7.7
SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_30506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 68
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1
Query: 295 QIAILNRRLQYRFIITDYSTS 357
+I I N++++YRFI T YST+
Sbjct: 36 RIEIANKQIKYRFIATSYSTT 56
>SB_55814| Best HMM Match : zf-AD (HMM E-Value=1.9)
Length = 266
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 544 SLHLKFVKMFVKLGSDCLTELCNGKRG 624
S+HLKF KM + G + + C G+ G
Sbjct: 20 SVHLKFCKMLLGTGKTAVNKACRGELG 46
>SB_35838| Best HMM Match : NCD3G (HMM E-Value=0.032)
Length = 589
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 775 YKFENPWFLTTIYYYCSGRR*FFTSYFQK 689
+KF+ WFL + Y S R FT FQK
Sbjct: 360 FKFKQVWFLVSCYIITSQERTTFTWTFQK 388
>SB_51188| Best HMM Match : RVT_1 (HMM E-Value=4.5e-24)
Length = 505
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 544 SLHLKFVKMFVKLGSDCLTELCNGKRG 624
S+HLKF KM + G + C G+ G
Sbjct: 303 SVHLKFCKMLLGTGKTAVNNACRGELG 329
>SB_42160| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1858
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 544 SLHLKFVKMFVKLGSDCLTELCNGKRG 624
S+HLKF KM + G + C G+ G
Sbjct: 1669 SVHLKFCKMLLGTGKTAVNNACRGELG 1695
>SB_29894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 838
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 544 SLHLKFVKMFVKLGSDCLTELCNGKRG 624
S+HLKF KM + G + C G+ G
Sbjct: 606 SVHLKFCKMLLGTGKTAVNNACRGELG 632
>SB_5197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1653
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = -3
Query: 569 ILTNFKCNEISTFQSLFNFSIILRSVKAHDLFFSILY 459
+LT NE++ F++LFN S + + + L+FS+L+
Sbjct: 1236 VLTPASMNELTRFKALFN-SKLTKDITDKHLWFSVLF 1271
>SB_1766| Best HMM Match : Nodulin_late (HMM E-Value=7.2)
Length = 265
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 544 SLHLKFVKMFVKLGSDCLTELCNGKRG 624
S+HLKF KM + G + C G+ G
Sbjct: 100 SVHLKFCKMLLGTGKTAVNNACRGELG 126
>SB_56283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 544 SLHLKFVKMFVKLGSDCLTELCNGKRG 624
S+HLKF KM + G + C G+ G
Sbjct: 20 SVHLKFCKMLLGTGKTAVNNACRGELG 46
>SB_52705| Best HMM Match : RnaseA (HMM E-Value=1.4)
Length = 346
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 544 SLHLKFVKMFVKLGSDCLTELCNGKRG 624
S+HLKF KM + G + C G+ G
Sbjct: 100 SVHLKFCKMLLGTGKTAVNNACRGELG 126
>SB_49391| Best HMM Match : Gal_Lectin (HMM E-Value=2.6e-05)
Length = 390
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 544 SLHLKFVKMFVKLGSDCLTELCNGKRG 624
S+HLKF KM + G + C G+ G
Sbjct: 20 SVHLKFCKMLLGTGKTAVNNACRGELG 46
>SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 544 SLHLKFVKMFVKLGSDCLTELCNGKRG 624
S+HLKF KM + G + C G+ G
Sbjct: 652 SVHLKFCKMLLGTGKTAVNNACRGELG 678
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,115,203
Number of Sequences: 59808
Number of extensions: 447437
Number of successful extensions: 986
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2239700683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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