Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0814
         (808 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   4.4  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   4.4  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   5.8  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   5.8  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   7.7  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   7.7  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   7.7  

>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 720 DGNFSLHISKNIICIINN 667
           DGNF+ H+S+ I  I  N
Sbjct: 76  DGNFNEHVSREIAKIFLN 93


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -2

Query: 606 KLRQTITT*LYKHFNKF*M*RNLNISIVIQFLHHFTFCEGT 484
           K+RQ +   L   F K  M R+ N+SI+   +  FT    T
Sbjct: 248 KMRQDLGASLDTQFKKIYMSRHENVSILYADIVGFTAISST 288


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +1

Query: 148 KVTSTLSQKLKNIFIALIPFIV*NIQFSYAFFCVSNTA 261
           K   T+   +    I  +PF   NI  SY   C+S  A
Sbjct: 269 KAAITVGVIMGVFLICWVPFFCVNIVTSYCKTCISGRA 306


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 267 DGRRI*NTKKSIRKLNILYNKRN*GDKY 184
           D ++  N   ++R LN LYN +N  D Y
Sbjct: 380 DTKKWNNKISALRALNDLYNVKNTLDSY 407


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +3

Query: 177 KEHIYRLNSFYCIEYSIFVCFFLCFKYGDRRLQLITIA 290
           K +IY + S         V   L F+Y D RL+   IA
Sbjct: 44  KAYIYTIKSNMAKTLQFDVHMMLQFRYLDARLKFSNIA 81


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 631 SISIVLPFIHVMIIYYTYNIFGNM 702
           S+ +V+P   + +I +   IFGN+
Sbjct: 36  SMRMVIPLTIIYMIIFVTGIFGNI 59


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 299 ICQSYRYQLEATVAVF 252
           +CQ++ YQ+ AT+  F
Sbjct: 196 VCQNFFYQIYATLGSF 211


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,663
Number of Sequences: 438
Number of extensions: 5064
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25610547
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)