Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0813
(796 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g33040.1 68415.m04052 ATP synthase gamma chain, mitochondrial... 95 6e-20
At4g04640.1 68417.m00679 ATP synthase gamma chain 1, chloroplast... 66 2e-11
At1g15700.1 68414.m01884 ATP synthase gamma chain 2, chloroplast... 62 4e-10
At2g34990.1 68415.m04293 zinc finger (C3HC4-type RING finger) fa... 31 0.88
At4g33430.1 68417.m04750 brassinosteroid insensitive 1-associate... 30 1.5
At2g13790.1 68415.m01522 leucine-rich repeat family protein / pr... 29 2.7
At1g44900.1 68414.m05144 DNA replication licensing factor, putat... 29 3.6
At5g19130.2 68418.m02277 GPI transamidase component family prote... 29 4.7
At5g19130.1 68418.m02276 GPI transamidase component family prote... 29 4.7
At5g24550.1 68418.m02899 glycosyl hydrolase family 1 protein con... 28 6.2
At2g36670.2 68415.m04498 aspartyl protease family protein contai... 28 6.2
At2g36670.1 68415.m04497 aspartyl protease family protein contai... 28 6.2
At2g13800.1 68415.m01523 leucine-rich repeat family protein / pr... 28 6.2
At4g02350.1 68417.m00319 exocyst complex subunit Sec15-like fami... 28 8.2
At4g01380.1 68417.m00178 plastocyanin-like domain-containing pro... 28 8.2
At3g60140.1 68416.m06715 glycosyl hydrolase family 1 protein con... 28 8.2
At2g04400.1 68415.m00444 indole-3-glycerol phosphate synthase (I... 28 8.2
>At2g33040.1 68415.m04052 ATP synthase gamma chain, mitochondrial
(ATPC) identical to SP|Q96250 ATP synthase gamma chain,
mitochondrial precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; contains Pfam profile: PF00231 ATP synthase
Length = 325
Score = 94.7 bits (225), Expect = 6e-20
Identities = 62/193 (32%), Positives = 108/193 (55%), Gaps = 2/193 (1%)
Frame = +1
Query: 124 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEV 303
R+++T + + R+KSVKNIQKIT++MKMV+A+K + + +R + F
Sbjct: 41 RSIST-QVVRNRMKSVKNIQKITKAMKMVAASKLRAVQGRAENSRGLWQ---PFTALLGD 96
Query: 304 TPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIR--NRLSEPGAENIKVICVGDKSRGILQ 477
P D K + V ++SD+GLCG +++ V KV R +L+ + ++ + VG+K++ I+
Sbjct: 97 NPSIDVKKSVVVTLSSDKGLCGGINSTVVKVSRALYKLNAGPEKEVQFVIVGEKAKAIMF 156
Query: 478 RLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLP 657
R I+ E+ + P + S LA IL EF + +I+YNKF SVV++ +
Sbjct: 157 RDSKNDIVLSVTELNKNPLNYAQVSVLADDIL-KNVEFDALRIVYNKFHSVVAFLPTVST 215
Query: 658 LYTKKSIESASKL 696
+ + + IE S++
Sbjct: 216 VLSPEIIEKESEI 228
>At4g04640.1 68417.m00679 ATP synthase gamma chain 1, chloroplast
(ATPC1) identical to SP|Q01908 ATP synthase gamma chain
1, chloroplast precursor (EC 3.6.3.14) {Arabidopsis
thaliana}
Length = 373
Score = 66.5 bits (155), Expect = 2e-11
Identities = 59/183 (32%), Positives = 86/183 (46%), Gaps = 16/183 (8%)
Frame = +1
Query: 133 ATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTPP 312
A+L+ + R+ SVKN QKIT++MK+V+AAK RA+ + RP+ E V+
Sbjct: 51 ASLRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQ 110
Query: 313 EDD-----------PKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIK--VICVG 453
DD K V +T DRGLCG + + K R+ E ++ VI VG
Sbjct: 111 TDDVDVPLTKVRPVKKVALVVVTGDRGLCGGFNNFIIKKAEARIKELKGLGLEYTVISVG 170
Query: 454 DKSRG-ILQRLYGKHIISVANEIGRLPPTFLDASQLATAI--LTSGYEFGSGKIIYNKFK 624
K L+R Y + E G L PT +A +A + L E +++Y KF
Sbjct: 171 KKGNSYFLRRPYIP--VDKYLEAGTL-PTAKEAQAVADDVFSLFISEEVDKVELLYTKFV 227
Query: 625 SVV 633
S+V
Sbjct: 228 SLV 230
>At1g15700.1 68414.m01884 ATP synthase gamma chain 2, chloroplast
(ATPC2) identical to SP|Q01909 ATP synthase gamma chain
2, chloroplast precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; contains Pfam profile: PF00231 ATP synthase;
similar to ATP synthase gamma-subunit GI:21241 from
[Spinacia oleracea]
Length = 386
Score = 62.1 bits (144), Expect = 4e-10
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Frame = +1
Query: 133 ATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQ-FYERAEVTP 309
A ++ + R+ SVKN QKIT++M++V+AA+ RA+ + RP+ E V+ Y +
Sbjct: 61 AGIRELRERIDSVKNTQKITEAMRLVAAARVRRAQDAVIKGRPFTETLVEILYSINQSAQ 120
Query: 310 PEDDPKQL----------FVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIK--VICVG 453
ED L V +T D+GLCG + V+K R+ E I VI VG
Sbjct: 121 LEDIDFPLSIVRPVKRVALVVVTGDKGLCGGFNNAVTKKATLRVQELKQRGIDCVVISVG 180
Query: 454 DKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAI--LTSGYEFGSGKIIYNKFKS 627
K R + + E G + PT +A +A + L E +++Y KF S
Sbjct: 181 KKGNAYFSR-RDEFDVDKCIEGGGVFPTTKEAQVIADDVFSLFVSEEVDKVELVYTKFVS 239
Query: 628 VV 633
+V
Sbjct: 240 LV 241
>At2g34990.1 68415.m04293 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 302
Score = 31.1 bits (67), Expect = 0.88
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +1
Query: 529 PPTFLDASQLA----TAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLYTKKSIESASKL 696
P T + AS L T IL + + G + + ++ S Y+Q + +T +ES + +
Sbjct: 4 PGTEIKASDLTLLVITIILFAIFIVGLASVCF-RWTSRQFYSQESINPFTDSDVESRTSI 62
Query: 697 TAYDSLDSDVLQSYTEF 747
TA LD ++ S+ F
Sbjct: 63 TAVRGLDEAIINSFPTF 79
>At4g33430.1 68417.m04750 brassinosteroid insensitive 1-associated
receptor kinase 1 (BAK1) / somatic embryogenesis
receptor-like kinase 3 (SERK3) identical to SP|Q94F62
BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase
1 precursor (EC 2.7.1.37) (BRI1-associated receptor
kinase 1) (Somatic embryogenesis receptor-like kinase 3)
{Arabidopsis thaliana}; contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain;
identical to cDNA somatic embryogenesis receptor-like
kinase 3 (SERK3) GI:14573458
Length = 615
Score = 30.3 bits (65), Expect = 1.5
Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 4/103 (3%)
Frame = +1
Query: 289 ERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA---ENIKVICVGDK 459
ER E PP D PK+ +A+ S RGL K+I + E + + VGD
Sbjct: 377 ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDF 435
Query: 460 SRGILQRLYGKHI-ISVANEIGRLPPTFLDASQLATAILTSGY 585
L H+ +V IG + P +L + + GY
Sbjct: 436 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGY 478
>At2g13790.1 68415.m01522 leucine-rich repeat family protein /
protein kinase family protein
Length = 620
Score = 29.5 bits (63), Expect = 2.7
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 4/103 (3%)
Frame = +1
Query: 289 ERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA---ENIKVICVGDK 459
ER E P D PK+ +A+ S RGL K+I + E + + VGD
Sbjct: 382 ERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAV-VGDF 440
Query: 460 SRGILQRLYGKHI-ISVANEIGRLPPTFLDASQLATAILTSGY 585
L H+ +V IG + P +L + + GY
Sbjct: 441 GLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGY 483
>At1g44900.1 68414.m05144 DNA replication licensing factor, putative
similar to DNA replication licensing factor MCM2 from
{Xenopus laevis} SP|P55861, SP|P49736 {Homo sapiens};
contains Pfam profile PF00493: MCM2/3/5 family
Length = 928
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 616 KFKSVVSYAQSDLPLYTKKSIESASKLTAYDSLDSDVLQSYTEFSLA 756
KF+ ++S + S LP K E +K YD D S T+FS A
Sbjct: 862 KFEEIISGSNSGLPTIEVKIEELQTKAKEYDIADLRPFFSSTDFSKA 908
>At5g19130.2 68418.m02277 GPI transamidase component family protein
/ Gaa1-like family protein contains Pfam profile:
PF04114 Gaa1-like, GPI transamidase component
Length = 696
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -3
Query: 512 LATLMMCFPYNLCRIPRDLSPTQITLMFSAPGSLRRLRITLDTPVCT 372
L ++ PY +C++P SPT ++M+ S L + P C+
Sbjct: 508 LGFIVTLLPYFICQVPGQHSPTNRSIMWGTTSSSLLLITFVTMPGCS 554
>At5g19130.1 68418.m02276 GPI transamidase component family protein
/ Gaa1-like family protein contains Pfam profile:
PF04114 Gaa1-like, GPI transamidase component
Length = 699
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -3
Query: 512 LATLMMCFPYNLCRIPRDLSPTQITLMFSAPGSLRRLRITLDTPVCT 372
L ++ PY +C++P SPT ++M+ S L + P C+
Sbjct: 511 LGFIVTLLPYFICQVPGQHSPTNRSIMWGTTSSSLLLITFVTMPGCS 557
>At5g24550.1 68418.m02899 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to anther-specific protein ATA27 (GI:2746341)
[Arabidopsis thaliana]
Length = 534
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -2
Query: 528 ETSDLISNTNDVLSVQSLQDTARFISHTDHLDVLSTRFAETVADHFGY 385
E S ++ N+ D + + TARF++H H+D+ RF T H Y
Sbjct: 327 EQSMMLQNSFDFIGINYY--TARFVAHDLHVDLSRPRF--TTDQHLQY 370
>At2g36670.2 68415.m04498 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 507
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 431 FSAPGSLRRLRITLDTPVCTAPHKPLSEVIATNNCLGSS 315
F APGSL +T P+C++ + + + NN G S
Sbjct: 147 FDAPGSLTAGSVTCSDPICSSVFQTTAAQCSENNQCGYS 185
>At2g36670.1 68415.m04497 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 512
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 431 FSAPGSLRRLRITLDTPVCTAPHKPLSEVIATNNCLGSS 315
F APGSL +T P+C++ + + + NN G S
Sbjct: 152 FDAPGSLTAGSVTCSDPICSSVFQTTAAQCSENNQCGYS 190
>At2g13800.1 68415.m01523 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 601
Score = 28.3 bits (60), Expect = 6.2
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 4/103 (3%)
Frame = +1
Query: 289 ERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA---ENIKVICVGDK 459
ER E P D PK+ +A+ S RGL K+I + E + + VGD
Sbjct: 363 ERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAV-VGDF 421
Query: 460 SRGILQRLYGKHI-ISVANEIGRLPPTFLDASQLATAILTSGY 585
L H+ +V IG + P +L + + GY
Sbjct: 422 GLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGY 464
>At4g02350.1 68417.m00319 exocyst complex subunit Sec15-like family
protein contains Pfam profile PF04091: Exocyst complex
subunit Sec15-like
Length = 771
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -2
Query: 459 FISHTDHLDVLSTRFAETVADHFGYTSVYSSAQTSVRGHSNKQLLG 322
F H HL + R AE HF T ++A+ ++ G K++ G
Sbjct: 536 FFRHAAHLSGVPLRMAERGRRHFPLTKSQNTAEDTLSGMLKKKIDG 581
>At4g01380.1 68417.m00178 plastocyanin-like domain-containing
protein
Length = 210
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 534 YFLGRKSAGHCYPHLGIRV 590
YF+ K+ GHCY L +RV
Sbjct: 152 YFISSKTPGHCYAGLKLRV 170
>At3g60140.1 68416.m06715 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to Cyanogenic Beta-Glucosidase
(GI:1311386)(pdb:1CBG) [Trifolium Repens]; identical
beta-glucosidase GI:10834547
Length = 577
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 528 ETSDLISNTNDVLSVQSLQDTARFISHTDHLDVLSTRF 415
E S ++ N++D + + TARF +H H+D RF
Sbjct: 321 EQSKMLQNSSDFVGINYY--TARFAAHLPHIDPEKPRF 356
>At2g04400.1 68415.m00444 indole-3-glycerol phosphate synthase
(IGPS) nearly identical to SP|P49572
Length = 402
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 681 LNRLLSVEGQVGLGVRDHRLELVVNDLSGTKLVSRGE 571
+ R+L +EG +G+ + LE D+S TK + GE
Sbjct: 304 MGRVLGIEGIELVGINNRSLETFEVDISNTKKLLEGE 340
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,738,913
Number of Sequences: 28952
Number of extensions: 417855
Number of successful extensions: 1180
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1794809600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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