BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0806
(517 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855504-1|ABH88191.1| 124|Tribolium castaneum chemosensory pro... 105 3e-25
DQ855505-1|ABH88192.1| 119|Tribolium castaneum chemosensory pro... 93 1e-21
DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory pro... 93 1e-21
DQ855493-1|ABH88180.1| 127|Tribolium castaneum chemosensory pro... 93 2e-21
DQ855506-1|ABH88193.1| 124|Tribolium castaneum chemosensory pro... 91 7e-21
DQ855496-1|ABH88183.1| 129|Tribolium castaneum chemosensory pro... 89 2e-20
DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory pro... 89 3e-20
DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory pro... 89 3e-20
DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory pro... 88 5e-20
DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory pro... 88 5e-20
DQ855489-1|ABH88176.1| 122|Tribolium castaneum chemosensory pro... 88 5e-20
AJ973444-1|CAJ01491.1| 122|Tribolium castaneum hypothetical pro... 88 5e-20
DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory pro... 87 7e-20
DQ855499-1|ABH88186.1| 124|Tribolium castaneum chemosensory pro... 87 9e-20
AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical pro... 86 2e-19
DQ855490-1|ABH88177.1| 133|Tribolium castaneum chemosensory pro... 84 6e-19
DQ855491-1|ABH88178.1| 144|Tribolium castaneum chemosensory pro... 84 8e-19
DQ855497-1|ABH88184.1| 127|Tribolium castaneum chemosensory pro... 81 6e-18
DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory pro... 63 2e-12
DQ855494-1|ABH88181.1| 99|Tribolium castaneum chemosensory pro... 52 4e-09
DQ855488-1|ABH88175.1| 112|Tribolium castaneum chemosensory pro... 44 8e-07
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 2.8
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 6.5
>DQ855504-1|ABH88191.1| 124|Tribolium castaneum chemosensory
protein 18 protein.
Length = 124
Score = 105 bits (251), Expect = 3e-25
Identities = 45/97 (46%), Positives = 64/97 (65%)
Frame = +1
Query: 91 IDDSFDASEVLSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDKQKQMA 270
I D+ D ++LSNERLLK+Y CLL++G CT E KK+K IPEAL T CAKC +K K
Sbjct: 22 IPDNIDIDDILSNERLLKNYVNCLLDKGRCTPEGKKLKSTIPEALSTDCAKCNEKVKANV 81
Query: 271 KQLAQGIKKTHPELWDEFITFYDPQGKYQTSFKDFLE 381
+++ + P++W + YDP G+Y++ +KD LE
Sbjct: 82 RKVLHHLIDNKPDMWKQLEAKYDPSGEYRSKYKDELE 118
>DQ855505-1|ABH88192.1| 119|Tribolium castaneum chemosensory
protein 19 protein.
Length = 119
Score = 93.5 bits (222), Expect = 1e-21
Identities = 37/103 (35%), Positives = 66/103 (64%)
Frame = +1
Query: 76 DKYEPIDDSFDASEVLSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDK 255
++Y D+ + E+L++ERLLK+Y C++++G CT + ++K +P+AL++ CAKC++K
Sbjct: 17 EQYTTKYDNINVDEILASERLLKNYFNCIMDRGACTPDADELKRVLPDALKSDCAKCSEK 76
Query: 256 QKQMAKQLAQGIKKTHPELWDEFITFYDPQGKYQTSFKDFLES 384
QK+M K++ + ++W E YDP G Y +KD +S
Sbjct: 77 QKEMTKKVIHFLSHNKQQMWKELTAKYDPDGIYFEKYKDKFDS 119
>DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory
protein 17 protein.
Length = 124
Score = 93.5 bits (222), Expect = 1e-21
Identities = 37/97 (38%), Positives = 61/97 (62%)
Frame = +1
Query: 91 IDDSFDASEVLSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDKQKQMA 270
+ + D E+L N+RL K+Y C+L +G CT E +++K IP+AL+ CAKC +K K+
Sbjct: 23 VPQNIDIDEILKNDRLTKNYLDCILEKGKCTPEGEELKKDIPDALQNECAKCNEKHKEGV 82
Query: 271 KQLAQGIKKTHPELWDEFITFYDPQGKYQTSFKDFLE 381
+++ + + K P W E YDP+G+Y++ + FLE
Sbjct: 83 RKVIRHLIKNKPSWWQELQEKYDPKGEYKSRYNHFLE 119
>DQ855493-1|ABH88180.1| 127|Tribolium castaneum chemosensory
protein 7 protein.
Length = 127
Score = 92.7 bits (220), Expect = 2e-21
Identities = 35/100 (35%), Positives = 67/100 (67%)
Frame = +1
Query: 73 QDKYEPIDDSFDASEVLSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTD 252
++KY D+ D ++L+N+R+L +Y KCL+++GPCT+E +++K +P+AL + C KC
Sbjct: 20 ENKYTNKYDNVDVDKILNNDRVLTNYIKCLMDEGPCTSEGRELKKTLPDALSSGCTKCNQ 79
Query: 253 KQKQMAKQLAQGIKKTHPELWDEFITFYDPQGKYQTSFKD 372
KQK+ A+++ + + + W+ YDPQG+Y+ +++
Sbjct: 80 KQKETAEKVIRHLTQKRARDWERLSKKYDPQGQYKKRYEE 119
>DQ855506-1|ABH88193.1| 124|Tribolium castaneum chemosensory
protein 20 protein.
Length = 124
Score = 90.6 bits (215), Expect = 7e-21
Identities = 40/104 (38%), Positives = 66/104 (63%)
Frame = +1
Query: 73 QDKYEPIDDSFDASEVLSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTD 252
+D+Y D+ + E+L ++RL ++Y CLL + PCT + +++K +P+AL+T CAKCTD
Sbjct: 20 EDQYTIKYDNVNLKEILQSDRLTENYVNCLLEKKPCTPDGEELKRVLPDALKTSCAKCTD 79
Query: 253 KQKQMAKQLAQGIKKTHPELWDEFITFYDPQGKYQTSFKDFLES 384
KQKQ AK + Q + K + W + YDP+ Y + +D L++
Sbjct: 80 KQKQGAKTVIQHLYKNKQDWWKQLEAKYDPEHTYVKAHEDELKA 123
>DQ855496-1|ABH88183.1| 129|Tribolium castaneum chemosensory
protein 10 protein.
Length = 129
Score = 89.0 bits (211), Expect = 2e-20
Identities = 36/103 (34%), Positives = 65/103 (63%)
Frame = +1
Query: 73 QDKYEPIDDSFDASEVLSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTD 252
Q+KY D+ D E+L ++RLLK+Y CL+ +G C+ + +++K +P+AL + C+KCT+
Sbjct: 21 QEKYTTKYDNIDLEEILKSDRLLKNYFNCLMERGTCSPDGEELKKALPDALHSGCSKCTE 80
Query: 253 KQKQMAKQLAQGIKKTHPELWDEFITFYDPQGKYQTSFKDFLE 381
KQK+ ++++ + + W+E YD G Y+ +KD +E
Sbjct: 81 KQKEGSRKIIHYLIDNKRDWWNELEAKYDKDGVYRQKYKDVIE 123
>DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory
protein 14 protein.
Length = 126
Score = 88.6 bits (210), Expect = 3e-20
Identities = 35/97 (36%), Positives = 58/97 (59%)
Frame = +1
Query: 91 IDDSFDASEVLSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDKQKQMA 270
+ + D E+L N+RL ++Y C+L +G CT E +++K IPEAL+ CAKC +K K+
Sbjct: 24 VPQNIDLDEILKNDRLTRNYIDCILGKGKCTPEGEELKRDIPEALQNECAKCNEKHKEGV 83
Query: 271 KQLAQGIKKTHPELWDEFITFYDPQGKYQTSFKDFLE 381
+++ + K P W E +DP+G+Y+ + LE
Sbjct: 84 RKVLHHLIKNKPNWWQELEAKFDPKGEYKQKYNKLLE 120
>DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory
protein 6 protein.
Length = 251
Score = 88.6 bits (210), Expect = 3e-20
Identities = 37/101 (36%), Positives = 61/101 (60%)
Frame = +1
Query: 82 YEPIDDSFDASEVLSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDKQK 261
YE D D +L+N R++ Y CLL++GPC + +K +PEAL+T+CAKCT+KQ+
Sbjct: 21 YESRYDHLDVESILNNRRMVNYYAACLLSKGPCPPQGVDLKRVLPEALQTNCAKCTEKQR 80
Query: 262 QMAKQLAQGIKKTHPELWDEFITFYDPQGKYQTSFKDFLES 384
A + + +KK +P++W++ +DP + F+ ES
Sbjct: 81 TAAYRSIKRLKKEYPKIWEQLRAVWDPDDVFIRKFETSFES 121
>DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory
protein 16 protein.
Length = 126
Score = 87.8 bits (208), Expect = 5e-20
Identities = 34/97 (35%), Positives = 60/97 (61%)
Frame = +1
Query: 91 IDDSFDASEVLSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDKQKQMA 270
+ + D E+L N+RL ++Y C+L +G CT E +++K IPEAL+ CAKC +K K+
Sbjct: 24 VPQNIDVDEILKNDRLTRNYLDCVLGKGKCTPEGEELKKDIPEALQNGCAKCNEKHKEGV 83
Query: 271 KQLAQGIKKTHPELWDEFITFYDPQGKYQTSFKDFLE 381
+++ + + P W E + +DPQG+Y+ + + L+
Sbjct: 84 RKVIHHLIENKPNWWQELESKFDPQGEYKKKYDELLK 120
>DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory
protein 9 protein.
Length = 126
Score = 87.8 bits (208), Expect = 5e-20
Identities = 34/97 (35%), Positives = 60/97 (61%)
Frame = +1
Query: 91 IDDSFDASEVLSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDKQKQMA 270
+ + D E+L N+RL ++Y C+L +G CT E +++K IPEAL+ CAKC +K K+
Sbjct: 24 VPQNIDVDEILKNDRLTRNYLDCVLGKGKCTPEGEELKKDIPEALQNGCAKCNEKHKEGV 83
Query: 271 KQLAQGIKKTHPELWDEFITFYDPQGKYQTSFKDFLE 381
+++ + + P W E + +DPQG+Y+ + + L+
Sbjct: 84 RKVIHHLIENKPNWWQELESKFDPQGEYKKKYDELLK 120
>DQ855489-1|ABH88176.1| 122|Tribolium castaneum chemosensory
protein 2 protein.
Length = 122
Score = 87.8 bits (208), Expect = 5e-20
Identities = 39/102 (38%), Positives = 59/102 (57%)
Frame = +1
Query: 76 DKYEPIDDSFDASEVLSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDK 255
D Y D+ D +L N+RL +Y +CLL +G C E ++D IP+AL T C KC D
Sbjct: 19 DVYPTKYDNVDIDAILHNKRLFDNYLQCLLKKGKCNEEAAILRDVIPDALITGCRKCNDH 78
Query: 256 QKQMAKQLAQGIKKTHPELWDEFITFYDPQGKYQTSFKDFLE 381
QK +++ + + K W + I+ YDP+G+YQT + +LE
Sbjct: 79 QKVSVEKVIRFLIKERNSDWQQLISVYDPKGEYQTQYAHYLE 120
>AJ973444-1|CAJ01491.1| 122|Tribolium castaneum hypothetical
protein protein.
Length = 122
Score = 87.8 bits (208), Expect = 5e-20
Identities = 39/102 (38%), Positives = 59/102 (57%)
Frame = +1
Query: 76 DKYEPIDDSFDASEVLSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDK 255
D Y D+ D +L N+RL +Y +CLL +G C E ++D IP+AL T C KC D
Sbjct: 19 DVYPTKYDNVDIDAILHNKRLFDNYLQCLLKKGKCNEEAAILRDVIPDALITGCRKCNDH 78
Query: 256 QKQMAKQLAQGIKKTHPELWDEFITFYDPQGKYQTSFKDFLE 381
QK +++ + + K W + I+ YDP+G+YQT + +LE
Sbjct: 79 QKVSVEKVIRFLIKERNSDWQQLISVYDPKGEYQTQYAHYLE 120
>DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory
protein 12 protein.
Length = 127
Score = 87.4 bits (207), Expect = 7e-20
Identities = 35/103 (33%), Positives = 67/103 (65%)
Frame = +1
Query: 76 DKYEPIDDSFDASEVLSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDK 255
DKY D+ D +++L ++RLLK+Y CLL++G C+ + +++K+ + +AL+T C+KC+ +
Sbjct: 20 DKYTTKYDNIDLNQILKSDRLLKNYVNCLLDRGKCSPDGQELKNNLADALQTSCSKCSQR 79
Query: 256 QKQMAKQLAQGIKKTHPELWDEFITFYDPQGKYQTSFKDFLES 384
QK ++ + + + K + W+E YDP G Y+ + D L++
Sbjct: 80 QKDGSRTIIRYLIKNKRDWWNELEAKYDPTGIYKNKYADELKA 122
>DQ855499-1|ABH88186.1| 124|Tribolium castaneum chemosensory
protein 13 protein.
Length = 124
Score = 87.0 bits (206), Expect = 9e-20
Identities = 38/96 (39%), Positives = 62/96 (64%)
Frame = +1
Query: 94 DDSFDASEVLSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAK 273
+D DA+ L +ERL+KSY +CLL G CT +++K IP+AL+ CAKC DK K+ +
Sbjct: 25 NDELDAA--LKSERLMKSYFECLLGTGKCTPSGEELKKDIPDALKNECAKCNDKHKEGIR 82
Query: 274 QLAQGIKKTHPELWDEFITFYDPQGKYQTSFKDFLE 381
++ + K PE W++ +DPQG Y+ ++++L+
Sbjct: 83 KVIHYLVKQKPEWWEQLQKKFDPQGIYKKRYQNYLD 118
>AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical
protein protein.
Length = 127
Score = 85.8 bits (203), Expect = 2e-19
Identities = 34/103 (33%), Positives = 67/103 (65%)
Frame = +1
Query: 76 DKYEPIDDSFDASEVLSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDK 255
DKY D+ D +++L ++RLLK+Y CLL++G C+ + +++K+ + +AL+T C+KC+ +
Sbjct: 20 DKYTTKYDNIDLNQILKSDRLLKNYVNCLLDRGKCSPDGQELKNNLADALQTSCSKCSQR 79
Query: 256 QKQMAKQLAQGIKKTHPELWDEFITFYDPQGKYQTSFKDFLES 384
Q+ ++ + + + K + W+E YDP G Y+ + D L++
Sbjct: 80 QQDGSRTIIRYLIKNKRDWWNELEAKYDPTGIYKNKYADELKA 122
>DQ855490-1|ABH88177.1| 133|Tribolium castaneum chemosensory
protein 4 protein.
Length = 133
Score = 84.2 bits (199), Expect = 6e-19
Identities = 37/106 (34%), Positives = 62/106 (58%)
Frame = +1
Query: 79 KYEPIDDSFDASEVLSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDKQ 258
KY D+ D V+ NERLLKSY CLL +G C+ + ++K +P+A+ET C+KC++KQ
Sbjct: 25 KYTTKYDNIDLENVVKNERLLKSYVDCLLEKGRCSPDGLELKKNMPDAIETDCSKCSEKQ 84
Query: 259 KQMAKQLAQGIKKTHPELWDEFITFYDPQGKYQTSFKDFLES*INK 396
K+ + + + + P+ W YDP G Y+ + + + ++K
Sbjct: 85 KEGSDFIMRYLIDNKPDYWKALEAKYDPDGTYKKRYFESQKDEVSK 130
>DQ855491-1|ABH88178.1| 144|Tribolium castaneum chemosensory
protein 5 protein.
Length = 144
Score = 83.8 bits (198), Expect = 8e-19
Identities = 34/98 (34%), Positives = 61/98 (62%)
Frame = +1
Query: 76 DKYEPIDDSFDASEVLSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDK 255
DKY D+ D +L ++RLL +Y CLL +GPC+ E +++K +P+AL T+C+KC++
Sbjct: 32 DKYTTRYDNVDVDRILHSKRLLLNYINCLLEKGPCSPEGRELKKILPDALVTNCSKCSEV 91
Query: 256 QKQMAKQLAQGIKKTHPELWDEFITFYDPQGKYQTSFK 369
QK+ A ++ + + W++ + YDP G Y+ ++
Sbjct: 92 QKKQAGKILTFVLLNYRNEWNQLVAKYDPDGIYRKQYE 129
>DQ855497-1|ABH88184.1| 127|Tribolium castaneum chemosensory
protein 11 protein.
Length = 127
Score = 81.0 bits (191), Expect = 6e-18
Identities = 33/97 (34%), Positives = 60/97 (61%)
Frame = +1
Query: 79 KYEPIDDSFDASEVLSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDKQ 258
KY D+ D E++ ++RLLK+Y CLL +G CT + ++K +P+AL T C+KC++ Q
Sbjct: 23 KYTTKYDNVDLDEIIKSDRLLKNYVNCLLEKGKCTPDGAELKRHLPDALHTECSKCSETQ 82
Query: 259 KQMAKQLAQGIKKTHPELWDEFITFYDPQGKYQTSFK 369
K +K++ + + + W+E YD +G+Y+ ++
Sbjct: 83 KNGSKKIMRHLIDHKRDWWNELEEKYDKEGEYRKKYE 119
>DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory
protein 15 protein.
Length = 146
Score = 62.9 bits (146), Expect = 2e-12
Identities = 25/75 (33%), Positives = 44/75 (58%)
Frame = +1
Query: 118 VLSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQGIKK 297
+L N+++ ++Y C+L++G CT E +K+K I E ++ C KC KQK+ ++ Q +
Sbjct: 31 ILKNDQMTRNYLDCVLDKGKCTKEAEKLKKGITETMKNGCVKCEQKQKEDVHKVFQHLMI 90
Query: 298 THPELWDEFITFYDP 342
P W E T ++P
Sbjct: 91 HRPNWWHELETKFNP 105
>DQ855494-1|ABH88181.1| 99|Tribolium castaneum chemosensory
protein 8 protein.
Length = 99
Score = 51.6 bits (118), Expect = 4e-09
Identities = 19/72 (26%), Positives = 40/72 (55%)
Frame = +1
Query: 121 LSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQGIKKT 300
L+ ++ C L++ PC A +IK +PE + +C +C +Q A+++A+ ++
Sbjct: 26 LAGNNYIEKQLLCALDKAPCDALGNQIKGALPEIIGKNCERCDSRQVANARRIARYVQTK 85
Query: 301 HPELWDEFITFY 336
HP++W+ + Y
Sbjct: 86 HPDVWNALVKKY 97
>DQ855488-1|ABH88175.1| 112|Tribolium castaneum chemosensory
protein 1 protein.
Length = 112
Score = 44.0 bits (99), Expect = 8e-07
Identities = 17/72 (23%), Positives = 37/72 (51%)
Frame = +1
Query: 121 LSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQGIKKT 300
L++ R L KC + PC +++K P L C +CT ++ + +++ ++K
Sbjct: 39 LNDRRYLLRQLKCATGEAPCDPVGRRLKSLAPLVLRGSCPQCTPQEMKQIQKVLAFVQKN 98
Query: 301 HPELWDEFITFY 336
+P+ W++ + Y
Sbjct: 99 YPKEWNKILHQY 110
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.2 bits (45), Expect = 2.8
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -2
Query: 282 RKLFRHLLLFISTFRTMGLQSFWNFIFNFLQFCSAGP 172
R+ H++ FI T GL W + + C+ GP
Sbjct: 1922 RRFIAHVVDFIETNNFDGLDLDWEYPKCWQVDCNKGP 1958
Score = 21.4 bits (43), Expect = 4.9
Identities = 9/36 (25%), Positives = 16/36 (44%)
Frame = -2
Query: 279 KLFRHLLLFISTFRTMGLQSFWNFIFNFLQFCSAGP 172
+ +H+L F+ + GL W + + C GP
Sbjct: 1498 RFIKHVLQFLEKWNFDGLDLDWEYPKCWQVDCKKGP 1533
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = -2
Query: 267 HLLLFISTFRTMGLQSFWNFIFNFLQFCSAGP 172
H+L FI + GL W + + C+ GP
Sbjct: 2425 HVLAFIEEWNFDGLDLDWEYPKCWQVDCNKGP 2456
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.0 bits (42), Expect = 6.5
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -3
Query: 305 GCVFLIPCASCFAICFCLSVHFAQWV 228
G FL+ + FA+C L + W+
Sbjct: 881 GISFLLVTQTIFALCVVLQLQENDWL 906
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,640
Number of Sequences: 336
Number of extensions: 2196
Number of successful extensions: 25
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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