BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0803 (788 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_13907| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-09 SB_1025| Best HMM Match : Antistasin (HMM E-Value=3.5) 45 6e-05 SB_637| Best HMM Match : HR1 (HMM E-Value=2.7e-18) 36 0.049 SB_56072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26 SB_7525| Best HMM Match : zf-CCHC (HMM E-Value=1.6e-08) 33 0.26 SB_34678| Best HMM Match : Bromodomain (HMM E-Value=9e-25) 31 1.1 SB_31796| Best HMM Match : SAP (HMM E-Value=3.5e-10) 31 1.1 SB_13199| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4 SB_19552| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5 SB_51085| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7 SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34) 29 5.7 SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 29 5.7 SB_33889| Best HMM Match : zf-CCHC (HMM E-Value=2.1e-05) 29 5.7 SB_57805| Best HMM Match : Myotub-related (HMM E-Value=4.2) 28 7.5 SB_37538| Best HMM Match : zf-CCHC (HMM E-Value=0.0011) 28 7.5 SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9 SB_24458| Best HMM Match : P60 (HMM E-Value=0.00014) 28 9.9 SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9 >SB_13907| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 311 Score = 60.9 bits (141), Expect = 1e-09 Identities = 25/51 (49%), Positives = 38/51 (74%) Frame = +2 Query: 47 FNNYMCKKFFHPASRDNLKRVWMAEQKTDAYKKKQEELRLQYEKEQDLHEN 199 F +M KK FHP S+ N+K+VWMAEQK + K K++++ QY+KEQ+ ++N Sbjct: 3 FAKFMNKKDFHPGSKWNIKKVWMAEQKALSEKTKEQDMAYQYKKEQERYQN 53 >SB_1025| Best HMM Match : Antistasin (HMM E-Value=3.5) Length = 136 Score = 45.2 bits (102), Expect = 6e-05 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%) Frame = +2 Query: 53 NYMCKKFFHPASRDNLKRVWMAEQKTDAYKKKQEELR---LQYEKEQDLHENXXXXXXXX 223 N KK +HP + N++RVW AEQK +A KK E+LR L+ + +++ + Sbjct: 37 NKNLKKSWHPQTLRNVERVWKAEQKAEAESKKIEQLRRELLEEKAREEMQRHAVQQGISK 96 Query: 224 XXXXXXNFMYEPPPGVKKE 280 ++MY P + +E Sbjct: 97 KKSERLDWMYSAPGQINRE 115 >SB_637| Best HMM Match : HR1 (HMM E-Value=2.7e-18) Length = 686 Score = 35.5 bits (78), Expect = 0.049 Identities = 21/64 (32%), Positives = 34/64 (53%) Frame = +2 Query: 8 ETQLVVKNKMGKGFNNYMCKKFFHPASRDNLKRVWMAEQKTDAYKKKQEELRLQYEKEQD 187 + QL V+NK+ +G N M + + S+D K V A+Q + K K E +R+ +EQ Sbjct: 130 QKQLAVENKVKQGAEN-MLAMYANAKSKDKAKLVAEAQQMLEDAKTKMEIIRMAILREQQ 188 Query: 188 LHEN 199 + N Sbjct: 189 VATN 192 >SB_56072| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1308 Score = 33.1 bits (72), Expect = 0.26 Identities = 20/58 (34%), Positives = 30/58 (51%) Frame = -1 Query: 287 FPFLSLHQEEAHT*SLNSICLYFLYLVMLCSHVDPVLFHIVIAILLVFSCMHLFSVLP 114 F FL +EE +L SI L+ + +L H D LF+I + +L S H + +LP Sbjct: 292 FCFLGCLEEEKRMYALKSIFLFPPVISLLRYHSDESLFNINVVVLDSVSRAHFYRMLP 349 >SB_7525| Best HMM Match : zf-CCHC (HMM E-Value=1.6e-08) Length = 256 Score = 33.1 bits (72), Expect = 0.26 Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Frame = +2 Query: 317 EWQRKYNAPRESYCKGDNEIRDQPFGILVR---NVRCIKCHKWGHINTDKECTMYTLSMS 487 EW R ++ ++ YC E D FG R N+ C KC + GHI+ D T + + Sbjct: 96 EWCRIIHSNQQLYCM---ECSD--FGHTRRKCPNIECRKCKERGHISFDCPKHDETTNTN 150 Query: 488 EARALQASTSTPE 526 E +A + +TST E Sbjct: 151 EQKAPKRNTSTDE 163 >SB_34678| Best HMM Match : Bromodomain (HMM E-Value=9e-25) Length = 1137 Score = 31.1 bits (67), Expect = 1.1 Identities = 14/55 (25%), Positives = 29/55 (52%) Frame = +2 Query: 389 FGILVRNVRCIKCHKWGHINTDKECTMYTLSMSEARALQASTSTPEEKEEKPDVP 553 FG+ ++C C + GH+ T+K C +Y + +L + + + EE+ ++P Sbjct: 420 FGVSDEELKCGACGQIGHMRTNKNCPLY--QEANPGSLSVAMTDEQVAEEEFNMP 472 >SB_31796| Best HMM Match : SAP (HMM E-Value=3.5e-10) Length = 1029 Score = 31.1 bits (67), Expect = 1.1 Identities = 27/122 (22%), Positives = 53/122 (43%) Frame = +2 Query: 266 GVKKEREREDNEPEYKFEWQRKYNAPRESYCKGDNEIRDQPFGILVRNVRCIKCHKWGHI 445 GVKKER ++ +P++K +Y P K + D P+ ++++ + + + Sbjct: 267 GVKKERRKKAAKPKFKKYKYHEYRPPNGEVEKSSLPM-DSPYALMLQQQQLYL--QLQVL 323 Query: 446 NTDKECTMYTLSMSEARALQASTSTPEEKEEKPDVPTLMQQMRDTGLIMKPGALPLTAAK 625 + C L + + +TS EEKP V ++ D +K LP++ +K Sbjct: 324 YQNYPCQFVGLPSIPENSTKNTTSNNNNNEEKP-VKIEDMRVVDMRKELKLRGLPVSGSK 382 Query: 626 VE 631 + Sbjct: 383 TD 384 >SB_13199| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 259 Score = 30.7 bits (66), Expect = 1.4 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Frame = +2 Query: 302 PEYKFEWQRKYNAPRESYCKGDNEIRD--QPFGILVRNVRCIKC 427 P ++FE + K PR C GDN+ D R +R +KC Sbjct: 22 PRHEFECENKLCVPRTWLCDGDNDCHDGSDEKNCESRRMRTVKC 65 >SB_19552| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 211 Score = 29.9 bits (64), Expect = 2.5 Identities = 10/43 (23%), Positives = 22/43 (51%) Frame = +2 Query: 263 PGVKKEREREDNEPEYKFEWQRKYNAPRESYCKGDNEIRDQPF 391 P +K E+ + E K W+++ + + + D +++QPF Sbjct: 4 PWIKSREHTEEEKREQKRRWRQRQKEKKRAKKQADEVVKEQPF 46 >SB_51085| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1251 Score = 28.7 bits (61), Expect = 5.7 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 3/43 (6%) Frame = +2 Query: 323 QRKYNAPRESYCKGDNEIRDQPFGIL---VRNVRCIKCHKWGH 442 QR+ R YC RD P G + NVRC KC+K GH Sbjct: 215 QRRQTPDRCGYCG-----RDHPRGKINCPAANVRCDKCNKVGH 252 >SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34) Length = 1683 Score = 28.7 bits (61), Expect = 5.7 Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 6/67 (8%) Frame = +2 Query: 272 KKEREREDNEPEYKFEWQRKYNAPRESYCKGDNEIRDQPFGILVRNVRCIKCH------K 433 +K RE+E+ + +++ E QR ++ D E RD+ + + N K Sbjct: 652 RKRREKEEKDRQFQLEKQRLAEEEQKRQAMIDQERRDRELAMRLANWNPFDTDTLGNFIK 711 Query: 434 WGHINTD 454 W +NTD Sbjct: 712 WNPVNTD 718 >SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) Length = 2049 Score = 28.7 bits (61), Expect = 5.7 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = +2 Query: 275 KEREREDNEPEYKFEWQRKYNAPRESYCKGDNEIRDQPFGILVR 406 KERER+ + + W R+++ PRE D ++D P I VR Sbjct: 578 KERERQREQKRKEALWYREWSRPREDLQLDD--LKDLPNPIPVR 619 >SB_33889| Best HMM Match : zf-CCHC (HMM E-Value=2.1e-05) Length = 525 Score = 28.7 bits (61), Expect = 5.7 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +2 Query: 404 RNVRCIKCHKWGHINTD 454 + +RC CHK+GHI D Sbjct: 252 KGLRCYHCHKFGHIKRD 268 >SB_57805| Best HMM Match : Myotub-related (HMM E-Value=4.2) Length = 167 Score = 28.3 bits (60), Expect = 7.5 Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 3/98 (3%) Frame = -1 Query: 371 HCLLYNSFL*EHCISFAIQIYILVHCLLFPFLSL-HQEEAHT*SLNSICLYFLYLVMLCS 195 HC +Y++ HC ++ + HC + L + H HT ++ Y + C+ Sbjct: 17 HCAIYHTLTISHCATY--HTLPISHCATYHTLPISHCVTCHTLPISFCATYHTLTIPHCA 74 Query: 194 --HVDPVLFHIVIAILLVFSCMHLFSVLPSIPFSNCLL 87 H P+ L + C S ++P S C L Sbjct: 75 TYHTLPISHCATYHTLPISHC----STSYTLPISRCAL 108 >SB_37538| Best HMM Match : zf-CCHC (HMM E-Value=0.0011) Length = 215 Score = 28.3 bits (60), Expect = 7.5 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Frame = +2 Query: 323 QRKYNAPRESYCKGDNEIRDQPFGIL---VRNVRCIKCHKWGHI 445 QR+ R YC RD P G + NVRC KC K GHI Sbjct: 66 QRRQPPDRCEYCG-----RDHPRGKINCPAANVRCDKCTKVGHI 104 >SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2520 Score = 27.9 bits (59), Expect = 9.9 Identities = 17/65 (26%), Positives = 33/65 (50%) Frame = +2 Query: 5 RETQLVVKNKMGKGFNNYMCKKFFHPASRDNLKRVWMAEQKTDAYKKKQEELRLQYEKEQ 184 RE +L +K + G+ N + KK S + + + + + +A+K + EL+ Q+E Sbjct: 1675 REEELKLKLEAGESNNQAIDKKIAE-LSAEKQEIIQTSAKAEEAFKIQIHELKSQFETTN 1733 Query: 185 DLHEN 199 +EN Sbjct: 1734 QTYEN 1738 >SB_24458| Best HMM Match : P60 (HMM E-Value=0.00014) Length = 351 Score = 27.9 bits (59), Expect = 9.9 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +2 Query: 116 AEQKTDAYKKKQEELRLQYEKEQDLHEN 199 ++QK ++KQ++ L+ EKEQ L EN Sbjct: 256 SQQKRKELEEKQKQKELEAEKEQKLKEN 283 >SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1271 Score = 27.9 bits (59), Expect = 9.9 Identities = 16/58 (27%), Positives = 25/58 (43%) Frame = +2 Query: 473 TLSMSEARALQASTSTPEEKEEKPDVPTLMQQMRDTGLIMKPGALPLTAAKVEDNDST 646 T ++A L + P+ + P VP + Q L K ALP T +D D++ Sbjct: 454 TSQAAQANTLPQTADKPQAHQSNP-VPEVSQVAPKASLAPKANALPQTKPTPQDQDAS 510 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,119,741 Number of Sequences: 59808 Number of extensions: 394710 Number of successful extensions: 1452 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 1343 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1446 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2167838629 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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