Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0803
         (788 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    23   4.3  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   5.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   5.7  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    22   7.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.9  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   9.9  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    21   9.9  

>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 2/85 (2%)
 Frame = +2

Query: 113 MAEQKTDA--YKKKQEELRLQYEKEQDLHENXXXXXXXXXXXXXXNFMYEPPPGVKKERE 286
           + E++T    Y + +E  +  Y+ E++  +                   EP        +
Sbjct: 29  LLEERTSRKRYSRSREREQNSYKNEKEYRKYRETSKERSRDRTERERSREPKIISSLSNK 88

Query: 287 REDNEPEYKFEWQRKYNAPRESYCK 361
              N   YK+ +  KYN    +Y K
Sbjct: 89  TIHNNNNYKYNYNNKYNYNNNNYNK 113


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +2

Query: 308 YKFEWQRKYNAPRESYCKGDNEIRDQPFGILVRNV 412
           Y F++Q K N    +       +RD  F +L +N+
Sbjct: 393 YNFDFQNKNNLIPSALQSYSTSMRDPAFYMLYQNI 427



 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 287 REDNEPEYKFEW 322
           RE N+PEYK ++
Sbjct: 212 REYNDPEYKLDY 223


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/43 (20%), Positives = 23/43 (53%)
 Frame = +3

Query: 333  TMLLEKAIVKETMKSEISLLVYLSGM*DALSVISGDISIQIRN 461
            +MLL++  +   + S+  + +Y  G+     + + D+S+ + N
Sbjct: 1331 SMLLDEVDISMEVPSDALIALYSQGLFSLSEIDNLDVSLDVSN 1373


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 171 YCNRNSSCFF 142
           YC RN SC++
Sbjct: 10  YCRRNFSCYY 19


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 287 REDNEPEYKFEW 322
           RE N+PEYK ++
Sbjct: 212 REYNDPEYKLDY 223


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -1

Query: 398 VYQKADL*FHCLLYNSF 348
           VYQ AD  FH L  N+F
Sbjct: 213 VYQNADDSFHRLTSNTF 229


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 192 CRSCSFSYCNRNSSCFFLY 136
           C  C   YC+RNS    +Y
Sbjct: 38  CVICERVYCSRNSLMTHIY 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,693
Number of Sequences: 438
Number of extensions: 3678
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)