Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0802
(771 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1220 + 35021495-35021647,35022819-35022905,35022988-35023086 66 3e-11
07_03_0434 + 18175560-18175695,18176068-18176177,18176553-181766... 31 1.3
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 29 3.1
08_01_0400 - 3538570-3540363,3540895-3541639,3543688-3544007 29 4.1
04_04_1630 - 34896021-34896143,34896329-34896403,34896500-348965... 29 4.1
04_03_0852 + 20289439-20289721,20289858-20290642 29 5.4
03_06_0353 - 33317015-33318235,33318567-33318824,33319587-333199... 29 5.4
12_02_1212 - 27043723-27044241,27044483-27044850,27045513-27045753 28 7.2
10_07_0063 - 12502305-12503361,12503567-12503668,12504251-125043... 28 7.2
08_01_0698 + 6162127-6162160,6162317-6162512,6162654-6162699 28 7.2
07_03_0940 + 22762176-22762345,22763207-22763252 28 7.2
04_04_1411 + 33375988-33376045,33376161-33376551,33376830-333769... 28 7.2
>02_05_1220 + 35021495-35021647,35022819-35022905,35022988-35023086
Length = 112
Score = 66.1 bits (154), Expect = 3e-11
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Frame = +3
Query: 93 IRQIKIKTGVVKRIXXXXXXXXXXXXLQKNRIQRIKDEGQDEHNIRKQEEVLQESLMMVP 272
+R +KIKT KRI + + +K++G D +++++QE VL ES MMVP
Sbjct: 4 LRNLKIKTSTCKRIVKELRSYEKEVEKEAAKTADMKEKGADPYDLKQQENVLAESRMMVP 63
Query: 273 DCQRRLIKAYTDLKTTL-ETEQDLKEHEEYITAEQVLKDAE 392
DC +RL A DLK TL E ++ ++ E AE + + E
Sbjct: 64 DCHKRLETALADLKATLAELKESNEQGAEIGEAESTITEVE 104
>07_03_0434 +
18175560-18175695,18176068-18176177,18176553-18176616,
18176839-18176915,18177152-18177223,18178337-18178456
Length = 192
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 231 KQEEVLQESLMMVPDCQRRLIKAYTDL 311
KQ EV L+ V DCQRR I Y+D+
Sbjct: 163 KQFEVFDIELLAVQDCQRRTIAFYSDV 189
>09_04_0087 +
14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 243 VLQESLMMVPDCQRRLIKAYTDLKTTLETEQDLKEHEEYITAEQVLKDAE 392
VL + L + D + RLI YT++K E + H + +T +L D +
Sbjct: 28 VLHQKLCLSIDMENRLIYGYTEIKVQAEND-TFALHADNMTIRNILVDGQ 76
>08_01_0400 - 3538570-3540363,3540895-3541639,3543688-3544007
Length = 952
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 279 QRRLIKAYTDLKTTLE-TEQDLKEHEEYITAEQVLKDAEPQ 398
+RR+ K Y D K + E D+K+ + A +KD EP+
Sbjct: 284 RRRVRKEYDDFKARINGLEHDIKQRSDSYNAAAGVKDGEPR 324
>04_04_1630 - 34896021-34896143,34896329-34896403,34896500-34896556,
34897176-34897352,34897426-34897492,34898043-34898101,
34898188-34898241,34898455-34898604,34898709-34898918,
34898980-34899039,34899399-34899527,34899616-34899720,
34899935-34900024,34900630-34900695,34901047-34901115,
34901348-34901467,34901572-34901634,34901681-34901817,
34902070-34902160,34902298-34902463,34902700-34904172,
34905666-34905940,34906322-34906819,34906996-34907145,
34907840-34907911,34908006-34908266,34908478-34908558,
34908745-34908996,34909323-34909382,34909602-34909853,
34910385-34910549,34910589-34910849,34911267-34912307,
34913398-34913457,34914055-34914165,34914448-34914534,
34915227-34915300,34915397-34915490,34915644-34915689,
34916397-34916521
Length = 2501
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 234 QEEVLQESLMMVPDCQRRLIKAYTDLKTTLETEQDLKEHEEYIT--AEQVLKDA 389
+EE L + + +CQ L K +L+ E + +L++ + +T AE+ L DA
Sbjct: 1552 EEEALASAQEEIKECQESLSKCEEELRRIQEKKMELQKEVDRLTELAERALLDA 1605
>04_03_0852 + 20289439-20289721,20289858-20290642
Length = 355
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -3
Query: 634 DLVAVECSPCCGETCACCILGDICFDDDFCVEVGGGGGTLRNAYLF 497
D+ V C P C C C + G C+D F VGG G N +LF
Sbjct: 81 DMCYVHC-PTCKLVCLCELTGTECYDPRF---VGGDG----NKFLF 118
>03_06_0353 -
33317015-33318235,33318567-33318824,33319587-33319904,
33319949-33320011,33320103-33320496,33320684-33320796,
33320932-33321639,33321667-33323199,33323395-33323607,
33323718-33324700,33324890-33325423,33325694-33325820,
33326083-33326162,33327347-33327377,33327949-33328053,
33328119-33328124,33328349-33328985,33329144-33329478,
33330394-33331113
Length = 2792
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +1
Query: 502 NMHSLMSLHHRQPQHKSHHQNKCHQE-YNK---HKFRHSKDYIRRPRDQIRAPSYM-PPQ 666
N +L + HH+Q Q HHQ H Y++ H +H + + P APS P
Sbjct: 68 NPAALAAYHHQQQQQYHHHQQLLHSSAYHQNPTHNLQH-RAAVPAPAAPAAAPSIQHRPV 126
Query: 667 SPA 675
+PA
Sbjct: 127 APA 129
>12_02_1212 - 27043723-27044241,27044483-27044850,27045513-27045753
Length = 375
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 508 HSLMSLHHRQPQHKSHHQNKCHQEYNKHKFRHSKDY 615
H L +HH Q Q +H+ H + H RH + Y
Sbjct: 236 HELQHIHHHQQQQFYYHE-VVHDGHGHHHRRHLQHY 270
>10_07_0063 -
12502305-12503361,12503567-12503668,12504251-12504378,
12504653-12504764,12504876-12504927,12505260-12505517,
12505943-12506079,12506296-12506606
Length = 718
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +1
Query: 502 NMHSLMSLHHRQPQHKSHHQNKCHQEYNKHKFRHSKDYIRRPRDQIRAPSYMPPQSPAY 678
N H H + Q + HHQ HQ Y+ + + Y R ++ + P P P +
Sbjct: 640 NHHQNYYGHRQMSQDQYHHQQNHHQNYHGRQGMNGNQYHDR-QNHNQNPQRFRPWKPCF 697
>08_01_0698 + 6162127-6162160,6162317-6162512,6162654-6162699
Length = 91
Score = 28.3 bits (60), Expect = 7.2
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 607 CCGETCACCILGDICF 560
CC C CC+L D+CF
Sbjct: 77 CCAALCCCCLL-DMCF 91
>07_03_0940 + 22762176-22762345,22763207-22763252
Length = 71
Score = 28.3 bits (60), Expect = 7.2
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 607 CCGETCACCILGDICF 560
CC C CC+L D+CF
Sbjct: 57 CCAALCCCCLL-DMCF 71
>04_04_1411 +
33375988-33376045,33376161-33376551,33376830-33376912,
33377209-33377297,33377481-33377554,33377768-33377818,
33377861-33377900,33378567-33378593,33379191-33379874
Length = 498
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +1
Query: 499 TNMHSLMSLHHRQPQHKSHHQNKCHQEYNKHKFRHSKD 612
+N ++ +SLH +Q QH+ HQ + Q+ + + S +
Sbjct: 417 SNCYTNVSLHEQQQQHQHQHQQEQQQDQQDDQSQSSNN 454
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,814,612
Number of Sequences: 37544
Number of extensions: 251913
Number of successful extensions: 930
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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