Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0802
(771 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 34 0.098
Z81114-2|CAB03286.1| 604|Caenorhabditis elegans Hypothetical pr... 31 0.91
U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical p... 31 0.91
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr... 30 2.1
X70830-1|CAA50178.1| 534|Caenorhabditis elegans Cytoplasmic int... 30 2.1
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 24 4.7
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p... 29 4.8
Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical... 29 4.8
Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z81079-5|CAB03082.2| 505|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z54306-6|CAA91090.2| 321|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr... 28 8.5
L14324-4|AAA28184.1| 159|Caenorhabditis elegans Hypothetical pr... 28 8.5
AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical ... 28 8.5
AL031268-1|CAD59161.1| 321|Caenorhabditis elegans Hypothetical ... 28 8.5
AJ238443-1|CAB41469.1| 454|Caenorhabditis elegans TBP-like fact... 28 8.5
AF228692-1|AAF59926.1| 505|Caenorhabditis elegans TBP-like fact... 28 8.5
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 34.3 bits (75), Expect = 0.098
Identities = 16/79 (20%), Positives = 45/79 (56%)
Frame = +3
Query: 174 QKNRIQRIKDEGQDEHNIRKQEEVLQESLMMVPDCQRRLIKAYTDLKTTLETEQDLKEHE 353
+K ++++I++E +DE + ++EE+ +E + + + + + + + L+ E+ E E
Sbjct: 1034 RKRKLEQIQEEDEDEEILDEEEELFEEEEEVDEEYEGEVEEVHRESSEELDDEE---EEE 1090
Query: 354 EYITAEQVLKDAEPQLPAI 410
E + E++ +D E + ++
Sbjct: 1091 EVMPEEEIEEDQEDEQESV 1109
>Z81114-2|CAB03286.1| 604|Caenorhabditis elegans Hypothetical
protein T04D3.2 protein.
Length = 604
Score = 31.1 bits (67), Expect = 0.91
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Frame = +3
Query: 9 VKKCIY*LKIALKKKTRSIIQQ-EMADPRIRQIKIKTGVVKRIXXXXXXXXXXXXLQKNR 185
VK I ++ +KKT+ I + ++A + ++IK+K V++ L+ +
Sbjct: 442 VKTFIVQMEEERRKKTKIIYDKVQLAKKKNKEIKLKKKVLEE-EEKTEKMMENMTLENSE 500
Query: 186 IQRIKDEGQDEHNIRKQEEVLQESLMMVPDCQRRLIKAYTDLKTTLETEQDLKE 347
Q KDE + IR +E + V D Q+RLI A + E K+
Sbjct: 501 DQSKKDEATVDAEIRTEESDNPFKRIPVIDAQKRLIDAIFQRQIDCNIEDSEKQ 554
>U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical
protein C34D4.1 protein.
Length = 512
Score = 31.1 bits (67), Expect = 0.91
Identities = 18/74 (24%), Positives = 39/74 (52%)
Frame = +3
Query: 171 LQKNRIQRIKDEGQDEHNIRKQEEVLQESLMMVPDCQRRLIKAYTDLKTTLETEQDLKEH 350
L+ + Q+ + + ++E Q++ L+E+ +R K+ TD++ LE E+D K
Sbjct: 320 LKSKKTQQERKKSENEKTT--QDQKLKEAEKNYEMWKRERSKSVTDIRKKLEQEEDKKRK 377
Query: 351 EEYITAEQVLKDAE 392
+E + +K+A+
Sbjct: 378 KEEEAKNEKIKEAQ 391
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical protein
H06O01.2 protein.
Length = 1461
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 526 HHRQPQHKSHHQNKCHQEYNKHKFR 600
HHR+ HK HH++ H+E +K K R
Sbjct: 1436 HHRE-HHKDHHKDHHHREQHKEKNR 1459
>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical protein
C05C9.3 protein.
Length = 1225
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 502 NMHSLMSLHHRQPQHKSHHQNKCHQEYNKHKFRHSK 609
N S+ ++H + Q + HH+ HQ+ K + H K
Sbjct: 957 NALSVPAIHQQHEQQEMHHEELVHQQPLKRQMEHEK 992
>X70830-1|CAA50178.1| 534|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 534
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 192 RIKDEGQDEHNIRKQEEVLQESLMMVPDCQRRLIKAYTDLKTTLETEQDLKEHEEYITA- 368
R KDE EH IR++ + +E + +P +IK +L +T T++ H+ +++
Sbjct: 466 RNKDENVGEHKIRRKLDGRREIVYSIP--ANVVIKPGKNLTSTPVTKEASTTHQSLLSSM 523
Query: 369 EQVLKDAEPQL 401
E+ ++EP L
Sbjct: 524 ERTPGESEPML 534
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 24.2 bits (50), Expect(2) = 4.7
Identities = 13/36 (36%), Positives = 14/36 (38%), Gaps = 3/36 (8%)
Frame = -3
Query: 607 CCGETCAC---CILGDICFDDDFCVEVGGGGGTLRN 509
CC C C C G C C GGGG R+
Sbjct: 108 CCTRCCTCCRPCCCGCGCGCGCGCCGCGGGGRKRRS 143
Score = 23.0 bits (47), Expect(2) = 4.7
Identities = 6/12 (50%), Positives = 6/12 (50%)
Frame = -3
Query: 616 CSPCCGETCACC 581
C CC C CC
Sbjct: 93 CCCCCRRCCTCC 104
>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical protein
C26C6.1a protein.
Length = 1883
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +1
Query: 502 NMHSL-MSLHHRQPQH-KSHHQNKCHQEY 582
N H + +HH+ PQH + HH + HQ++
Sbjct: 1677 NRHPVSQQMHHQHPQHMQQHHDHHPHQQH 1705
>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +1
Query: 502 NMHSL-MSLHHRQPQH-KSHHQNKCHQEY 582
N H + +HH+ PQH + HH + HQ++
Sbjct: 1677 NRHPVSQQMHHQHPQHMQQHHDHHPHQQH 1705
>Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical
protein C26C6.1b protein.
Length = 513
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +1
Query: 502 NMHSL-MSLHHRQPQH-KSHHQNKCHQEY 582
N H + +HH+ PQH + HH + HQ++
Sbjct: 307 NRHPVSQQMHHQHPQHMQQHHDHHPHQQH 335
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 529 HRQPQHK-SHHQNKCHQEYNKHKFRHS 606
H+ QH+ SHHQ++ H ++ H HS
Sbjct: 142 HQAGQHQQSHHQSQNHNQHRNHNQSHS 168
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 529 HRQPQHK-SHHQNKCHQEYNKHKFRHS 606
H+ QH+ SHHQ++ H ++ H HS
Sbjct: 266 HQAGQHQQSHHQSQNHNQHRNHNQSHS 292
>AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical
protein K04F10.7 protein.
Length = 293
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +1
Query: 508 HSLMSLHHRQPQHKSHHQ--NKCHQEYNKHKFRHSKDYIRRPRD 633
H S HHR HK HH+ +K H + H+ H + + P +
Sbjct: 140 HRPTSHHHRD--HKDHHRRDDKHHHRDSNHRHAHKRRHQEEPNN 181
>Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical
protein T02E1.3b protein.
Length = 679
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 505 MHSLMSLHHRQP-QHKSHHQNKCHQEYNKHKFRHSKDYIRRPRDQIRAPSYMPPQSP 672
+ + M HR P QH HH HQ ++H+ + Y+ Q R PQ P
Sbjct: 413 LSNFMPGRHRPPHQHPIHHH---HQ--SQHQLHQHQQYLHHAAQQYRYSHQQGPQHP 464
>Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical
protein T02E1.3a protein.
Length = 646
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 505 MHSLMSLHHRQP-QHKSHHQNKCHQEYNKHKFRHSKDYIRRPRDQIRAPSYMPPQSP 672
+ + M HR P QH HH HQ ++H+ + Y+ Q R PQ P
Sbjct: 380 LSNFMPGRHRPPHQHPIHHH---HQ--SQHQLHQHQQYLHHAAQQYRYSHQQGPQHP 431
>Z81079-5|CAB03082.2| 505|Caenorhabditis elegans Hypothetical
protein F39H11.2 protein.
Length = 505
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/32 (31%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +1
Query: 526 HHRQPQHKSH--HQNKCHQEYNKHKFRHSKDY 615
HH+QPQH +H QN+ ++ + + H++ +
Sbjct: 160 HHQQPQHFNHPSQQNQMIMQHRQPQMHHNQQH 191
>Z54306-6|CAA91090.2| 321|Caenorhabditis elegans Hypothetical
protein B0457.2 protein.
Length = 321
Score = 27.9 bits (59), Expect = 8.5
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 526 HHRQPQHKSHHQNKCHQEYNKHKFRH 603
HH + H+ HH +Q+Y + + H
Sbjct: 123 HHHRKSHRGHHYGSPYQQYYQQQQHH 148
>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/57 (22%), Positives = 27/57 (47%)
Frame = +3
Query: 243 VLQESLMMVPDCQRRLIKAYTDLKTTLETEQDLKEHEEYITAEQVLKDAEPQLPAIE 413
+LQE +V RL+ T + ++E ++ + E++LK+ E ++ E
Sbjct: 474 MLQEECDLVKKANERLVHQSLSKSTEYGARESIEEKKKIVELEELLKETEKRIKESE 530
>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/57 (22%), Positives = 27/57 (47%)
Frame = +3
Query: 243 VLQESLMMVPDCQRRLIKAYTDLKTTLETEQDLKEHEEYITAEQVLKDAEPQLPAIE 413
+LQE +V RL+ T + ++E ++ + E++LK+ E ++ E
Sbjct: 474 MLQEECDLVKKANERLVHQSLSKSTEYGARESIEEKKKIVELEELLKETEKRIKESE 530
>L14324-4|AAA28184.1| 159|Caenorhabditis elegans Hypothetical
protein ZK112.5 protein.
Length = 159
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 270 PDCQRRLIKAYTDLKTTLETEQDLKEHEEYITAEQVL-KDAEPQLPAIES*LSPFY 434
P + L+++ K LET K HE ++ E VL DA L I + L P+Y
Sbjct: 30 PVSKAELLESLESRKLGLETRVLDKYHENHVAFENVLVLDAPQDLETIVNLLLPWY 85
>AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical
protein Y62F5A.1a protein.
Length = 325
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +1
Query: 508 HSLMSLHHRQPQHKSHHQNKCHQEYNKHKFRHSKDYIRRPRDQIRAPSY-MPP 663
H M HH+QPQ SH Q Q ++ I P Q R P + MPP
Sbjct: 267 HLPMYSHHQQPQ-YSHQQPMNPQHHSPMTMMAPGQMIGHPIQQQRPPMHQMPP 318
>AL031268-1|CAD59161.1| 321|Caenorhabditis elegans Hypothetical
protein B0457.2 protein.
Length = 321
Score = 27.9 bits (59), Expect = 8.5
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 526 HHRQPQHKSHHQNKCHQEYNKHKFRH 603
HH + H+ HH +Q+Y + + H
Sbjct: 123 HHHRKSHRGHHYGSPYQQYYQQQQHH 148
>AJ238443-1|CAB41469.1| 454|Caenorhabditis elegans TBP-like factor
protein.
Length = 454
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/32 (31%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +1
Query: 526 HHRQPQHKSH--HQNKCHQEYNKHKFRHSKDY 615
HH+QPQH +H QN+ ++ + + H++ +
Sbjct: 160 HHQQPQHFNHPSQQNQMIMQHRQPQMHHNQQH 191
>AF228692-1|AAF59926.1| 505|Caenorhabditis elegans TBP-like factor
protein.
Length = 505
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/32 (31%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +1
Query: 526 HHRQPQHKSH--HQNKCHQEYNKHKFRHSKDY 615
HH+QPQH +H QN+ ++ + + H++ +
Sbjct: 160 HHQQPQHFNHPSQQNQMIMQHRQPQMHHNQQH 191
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,894,365
Number of Sequences: 27780
Number of extensions: 223361
Number of successful extensions: 1015
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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