Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0800
         (665 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1442 - 30172595-30172606,30172607-30172684,30173034-301734...    30   1.4  
06_03_1439 - 30157110-30157121,30157122-30157199,30157549-301579...    30   1.4  
06_03_1427 - 30090464-30090475,30090476-30090553,30090903-300913...    30   1.4  
06_03_1422 + 30058936-30058975,30059057-30059233,30060848-300610...    30   1.4  

>06_03_1442 -
           30172595-30172606,30172607-30172684,30173034-30173435,
           30173503-30173577,30173667-30173822,30173952-30174143,
           30174202-30174208,30175866-30175918
          Length = 324

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 246 RNTRPDLFCQNRFAVPVLSFLSFFRGLDVYSSSNLAFSHFFW 371
           R  +P+ FC    A P +  L     L +Y+ + LA +H FW
Sbjct: 29  RTDKPENFCGKFLAQPEIPKLKSVFSLQLYAPTTLAPAHDFW 70


>06_03_1439 -
           30157110-30157121,30157122-30157199,30157549-30157950,
           30158018-30158092,30158182-30158337,30158467-30158658,
           30158717-30158723,30160381-30160433
          Length = 324

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 246 RNTRPDLFCQNRFAVPVLSFLSFFRGLDVYSSSNLAFSHFFW 371
           R  +P+ FC    A P +  L     L +Y+ + LA +H FW
Sbjct: 29  RTDKPENFCGKFLAQPEIPKLKSVFSLQLYAPTTLAPAHDFW 70


>06_03_1427 -
           30090464-30090475,30090476-30090553,30090903-30091304,
           30091372-30091446,30091536-30091691,30091821-30092012,
           30093735-30093908,30094966-30095123,30096738-30096914,
           30096996-30097035
          Length = 487

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 246 RNTRPDLFCQNRFAVPVLSFLSFFRGLDVYSSSNLAFSHFFW 371
           R  +P+ FC    A P +  L     L +Y+ + LA +H FW
Sbjct: 192 RTDKPENFCGKFLAQPEIPKLKSVFSLQLYAPTTLAPAHDFW 233


>06_03_1422 +
           30058936-30058975,30059057-30059233,30060848-30061005,
           30062063-30062236,30063959-30064150,30064280-30064435,
           30064525-30064599,30064667-30065068,30065418-30065495,
           30065840-30066173,30066275-30066339
          Length = 616

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 246 RNTRPDLFCQNRFAVPVLSFLSFFRGLDVYSSSNLAFSHFFW 371
           R  +P+ FC    A P +  L     L +Y+ + LA +H FW
Sbjct: 192 RTDKPENFCGKFLAQPEIPKLKSVFSLQLYAPTTLAPAHDFW 233


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,864,178
Number of Sequences: 37544
Number of extensions: 219563
Number of successful extensions: 374
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 374
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)