Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0797
(807 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42548| Best HMM Match : DNA_binding_1 (HMM E-Value=5.2) 49 5e-06
SB_8782| Best HMM Match : CN_hydrolase (HMM E-Value=0) 44 1e-04
SB_19326| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 8e-04
SB_11184| Best HMM Match : CN_hydrolase (HMM E-Value=4.4e-10) 36 0.051
SB_10985| Best HMM Match : E-MAP-115 (HMM E-Value=5.5) 32 0.63
SB_34841| Best HMM Match : ResIII (HMM E-Value=1.6) 31 1.1
SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022) 30 2.5
SB_47367| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_27173| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_4447| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_35783| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_33872| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_24587| Best HMM Match : ResIII (HMM E-Value=0.82) 29 4.4
SB_8338| Best HMM Match : PA (HMM E-Value=5.7e-10) 29 4.4
SB_23845| Best HMM Match : IL6 (HMM E-Value=1.2) 29 5.9
SB_33687| Best HMM Match : Filament (HMM E-Value=0.1) 28 7.7
SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018) 28 7.7
SB_54878| Best HMM Match : PAP_assoc (HMM E-Value=5.4e-18) 28 7.7
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_42548| Best HMM Match : DNA_binding_1 (HMM E-Value=5.2)
Length = 101
Score = 48.8 bits (111), Expect = 5e-06
Identities = 27/92 (29%), Positives = 44/92 (47%)
Frame = +1
Query: 31 MENETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFP 210
M E SL + NL DL+E RI +G + ++ L +++
Sbjct: 1 MAAEFESLNKTLEKNLPAEDLKEVKRILYGNPVS-DLSLPAAAVSVAAELDFELAGYKID 59
Query: 211 AKDEQTRPPRIVKVGIVQHSIAVPTDRPVNEQ 306
A E+ R PR+V++G VQ+ I PT+ P+ +Q
Sbjct: 60 AAAEELRQPRLVRIGAVQNKIVEPTNMPIAKQ 91
>SB_8782| Best HMM Match : CN_hydrolase (HMM E-Value=0)
Length = 242
Score = 44.4 bits (100), Expect = 1e-04
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Frame = +1
Query: 241 IVKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAFCTR 420
+ ++G+VQ +AV ++ N Q+ K+K+ + G I+ E +N P+
Sbjct: 5 VFRIGLVQ--LAVTANKLQNLQRAR--EKIKEAVAA----GAKIVALPECFNSPYG---- 52
Query: 421 EKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVS-SILERDEKHSDILWNTAVVISDTGN 597
Q + ++AE G ++ L E+A + IV SI ER L+NT++ +GN
Sbjct: 53 -TQYFKDYAEEIP-GESSNMLAEVAKETGAYIVGGSIPERASNRK--LYNTSLSYDPSGN 108
Query: 598 VIGKHRKNHI 627
++GKHRK H+
Sbjct: 109 LMGKHRKIHL 118
>SB_19326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 41.5 bits (93), Expect = 8e-04
Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
Frame = +1
Query: 232 PPRIVKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAF 411
P + ++G+VQ +AV ++ N Q+ K+K+ + G I+ E +N P+
Sbjct: 4 PILVFRIGLVQ--LAVTANKLQNLQRAR--EKIKEAVAA----GAKIVALPECFNSPYG- 54
Query: 412 CTREKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVS-SILERDEKHSDILWNTAVVISD 588
Q + ++AE G ++ L E+A + IV SI ER L+NT++
Sbjct: 55 ----TQYFKDYAEEIP-GESSNMLAEVAKETGAYIVGGSIPERASNGK--LYNTSLSYDP 107
Query: 589 TGNVIGKHRK 618
+GN++GKHRK
Sbjct: 108 SGNLMGKHRK 117
>SB_11184| Best HMM Match : CN_hydrolase (HMM E-Value=4.4e-10)
Length = 128
Score = 35.5 bits (78), Expect = 0.051
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +1
Query: 442 FAESAED--GPTTTFLRELAIKYAMVIVS-SILERDEKHSDILWNTAVVISDTGNVIGKH 612
F + AE+ G ++ L E+A + IV SI ER L+NT++ +GN++GKH
Sbjct: 12 FKDYAEEIPGESSNMLAEVAKETGAYIVGGSIPERASNGK--LYNTSLSYDPSGNLMGKH 69
Query: 613 RKNHI 627
RK H+
Sbjct: 70 RKIHL 74
>SB_10985| Best HMM Match : E-MAP-115 (HMM E-Value=5.5)
Length = 320
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -3
Query: 790 DDLRSVLSEHHPVQDVVPSEADVHR 716
DD+R LS+H P +DVV EADV +
Sbjct: 266 DDVREELSQHVPQEDVVIKEADVKK 290
>SB_34841| Best HMM Match : ResIII (HMM E-Value=1.6)
Length = 949
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/47 (25%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 211 AKDEQTRPPRIVKVGIVQHSIAVPTDRPVNEQKKA-IFNKVKKIIDV 348
A D + P VK H + +PT++P+ E + + +++K+ ++ +V
Sbjct: 762 AHDHRNNPSLAVKAQTYHHYLCIPTEKPIEEWRPSELWHKLDRLAEV 808
>SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022)
Length = 1671
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 552 RMLLVPF*YRGHDHHCVLDGEFPKE 478
R L+ PF +R +DH V+D FPK+
Sbjct: 74 RKLIKPFYFRQYDHGSVVDAIFPKD 98
>SB_47367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 914
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 152 NPRSLQLRRLTSTSPHTLSRPRTSRPDP 235
+PR + L+ S+SPHT R R+S DP
Sbjct: 687 SPRHVLLQEARSSSPHTSIRNRSSSSDP 714
>SB_27173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1206
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 211 AKDEQTRPPRIVKVGIVQHSIAVPTDRPVNEQKKA-IFNKVKKIIDV 348
AKD + P VK H + +P ++P+ E + + + +K+ ++ +V
Sbjct: 823 AKDHRNNPRLAVKAQTYHHYLCIPAEKPIEEWRPSELGHKLDRLAEV 869
>SB_4447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -1
Query: 402 GHVPQLLETDDVNTLLAGNIDDFLDFIENCFLLLVDW 292
G VP + +NTLL GN D F NC LL W
Sbjct: 723 GLVPYWTKLFGINTLLVGNARDSHLFCRNCSGLLPYW 759
>SB_35783| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 250
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 667 EGNTGHPVFATRYGKNRGEHLLRTAPRLELDDVRTERS 780
E HPVF GKNR + L+ P DD +T+ S
Sbjct: 65 EAEISHPVFRATMGKNRFKFLMANLP---FDDEKTDYS 99
>SB_33872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 716
Score = 29.1 bits (62), Expect = 4.4
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Frame = +1
Query: 565 NTAVVISDTGNVIGK---HRKNHIPRVGDFNE----SNYYMEGN-TGHPVFATRYGKNRG 720
NTA +IS+TG+VI K H K + P D + Y GN TG PV+A YG+
Sbjct: 52 NTAKIISNTGDVIYKTRTHEKVYEPSEKDPSAIPPFLAYSPSGNVTGDPVYA-NYGRVED 110
Query: 721 -EHLL 732
+HLL
Sbjct: 111 FKHLL 115
>SB_24587| Best HMM Match : ResIII (HMM E-Value=0.82)
Length = 250
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 211 AKDEQTRPPRIVKVGIVQHSIAVPTDRPVNEQKKA-IFNKVKKIIDV 348
A D + P VK H + +PT++P+ E + + + +K+ ++ +V
Sbjct: 177 AHDHRNNPRLAVKAQTYHHYLCIPTEKPIEEWRPSELGHKLDRLAEV 223
>SB_8338| Best HMM Match : PA (HMM E-Value=5.7e-10)
Length = 326
Score = 29.1 bits (62), Expect = 4.4
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Frame = +1
Query: 565 NTAVVISDTGNVIGK---HRKNHIPRVGDFNE----SNYYMEGN-TGHPVFATRYGKNRG 720
NTA +IS+TG+VI K H K + P D + Y GN TG PV+A YG+
Sbjct: 143 NTAKIISNTGDVIYKTRTHEKVYEPSEKDPSAIPPFLAYSPSGNVTGDPVYA-NYGRVED 201
Query: 721 -EHLL 732
+HLL
Sbjct: 202 FKHLL 206
>SB_23845| Best HMM Match : IL6 (HMM E-Value=1.2)
Length = 1388
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 676 TGHPVFATRYGKNRGEHLLRTAPRLELDDVRTE 774
TGHPVF+ GKNR + L+ L DD E
Sbjct: 247 TGHPVFSATMGKNRFKFLM---ANLRFDDAFRE 276
>SB_33687| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 700
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 541 EKHSDILWNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYME 669
+K D LW A + D KH++N I R +F E ++Y E
Sbjct: 391 QKRFDTLWVKAKSMMDEET---KHKENAIKRSKEFEERSHYFE 430
>SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018)
Length = 3561
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 760 HPVQDVVPSEADVHRDSCRIWSQIQDGR 677
HP++ + +D+ RD CR W + GR
Sbjct: 2693 HPLRTRIGDYSDLSRDGCRAWVLPESGR 2720
>SB_54878| Best HMM Match : PAP_assoc (HMM E-Value=5.4e-18)
Length = 1425
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 214 KDEQTRPPRIVKVGIVQHSIAVPTDR-PVNEQKKAIFNKVKKIIDVAGQEGVN 369
+D T P V I VP + P N+ ++A+F++V K+ ++ GQ+ V+
Sbjct: 964 QDPPTDHPNNPSEEFVHKPILVPVMKSPRNDDERALFSRVSKVKNLWGQDLVD 1016
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 149 KNPRSLQLRRLTSTSPHTLSRPRTSRPDPR 238
K PR R S+SP SRP+ + P PR
Sbjct: 1047 KRPRHQSRERRPSSSPPRRSRPQRTSPSPR 1076
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,079,131
Number of Sequences: 59808
Number of extensions: 595711
Number of successful extensions: 1804
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1799
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2239700683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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