Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0796
(831 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28410| Best HMM Match : zf-CCCH (HMM E-Value=7.9e-05) 37 0.023
SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.093
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 33 0.38
SB_21901| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.38
SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.66
SB_11880| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.92) 32 0.66
SB_37758| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_32670| Best HMM Match : CIMR (HMM E-Value=0) 31 1.1
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 31 1.5
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 30 2.0
SB_7134| Best HMM Match : HMG_box (HMM E-Value=2e-16) 30 2.6
SB_4659| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_21059| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_25081| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_40497| Best HMM Match : NDT80_PhoG (HMM E-Value=5.1) 29 6.1
SB_18916| Best HMM Match : GPS (HMM E-Value=1e-17) 29 6.1
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 29 6.1
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_18164| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 28 8.1
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 28 8.1
SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_58810| Best HMM Match : DUF1613 (HMM E-Value=1.8) 28 8.1
SB_53176| Best HMM Match : Homeobox (HMM E-Value=0) 28 8.1
SB_35467| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 28 8.1
SB_17966| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_14763| Best HMM Match : Zona_pellucida (HMM E-Value=0) 28 8.1
>SB_28410| Best HMM Match : zf-CCCH (HMM E-Value=7.9e-05)
Length = 905
Score = 36.7 bits (81), Expect = 0.023
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +2
Query: 83 SERYSTESSVDPTTTAAGAKSNYSTA----TKSITTAVAATTESPASFATAEPI 232
SE +TESS P T + KS+ +TA T +TT+ A T +PA+ TA I
Sbjct: 565 SEAATTESSTVPQTVVSETKSSTTTATITTTSEVTTSAAVLTVAPAATTTASAI 618
>SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 34.7 bits (76), Expect = 0.093
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +2
Query: 29 ILVVAESVKSRKRSKQSTSERYSTESSVDPT-TTAAGAKSNYSTATKSITTAVA---ATT 196
++ + +V K +T+E+ +T ++ + T TT A + +T TK+ TT+V+ ATT
Sbjct: 210 VVASSSAVIMTNAPKITTTEQLATTTAAETTPTTTTSASTTTATTTKATTTSVSTTTATT 269
Query: 197 ESPASFATAE 226
+ S TAE
Sbjct: 270 KEEESTTTAE 279
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +2
Query: 47 SVKSRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAE 226
S + K + S++ +++ +TT A + ST + +TAV ATT SPA+ TA
Sbjct: 463 STSTTKATTTSSTSTTKATTTLSTSTTKATTTPSTSTTKATTSTAVEATT-SPAATETAP 521
Query: 227 P 229
P
Sbjct: 522 P 522
>SB_21901| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 32.7 bits (71), Expect = 0.38
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 730 AERWNTMSEKEKQRFHEMAEQDKHR 804
AE+W MSE+EK+ F + A +DK R
Sbjct: 47 AEKWKNMSEEEKETFVQKAGKDKER 71
Score = 28.3 bits (60), Expect = 8.1
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +3
Query: 615 NKPRGRMTAYAFFVQTCREEHKKNTLMSVLYLQHSRKVRREVEYNVG--KRKTAVP*DG* 788
NKP+G +AY FF+Q RE+ ++ L KV E N+ +++T V G
Sbjct: 10 NKPKGAKSAYNFFLQDQREKLQREE--GKFSLADFSKVSAEKWKNMSEEEKETFVQKAG- 66
Query: 789 TGQASFDLEMQNY 827
+ F EMQ+Y
Sbjct: 67 KDKERFKEEMQSY 79
>SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1147
Score = 31.9 bits (69), Expect = 0.66
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 68 SKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTES 202
S +S+++ YS + TTT A + + T SITTA A TT S
Sbjct: 478 SCKSSNDYYSVSNKATTTTTKLTALTTITHMTVSITTARATTTSS 522
>SB_11880| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.92)
Length = 425
Score = 31.9 bits (69), Expect = 0.66
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 77 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATA 223
+ +E T ++ + TTT A A +TA ++ TTA ATT + + TA
Sbjct: 335 TAAEVTMTTTAAEVTTTTAAAAEATTTAAEATTTAAEATTTAAEATTTA 383
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 95 STESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATA 223
+T + V TTTAA + + A ++ TTA ATT + + TA
Sbjct: 334 TTAAEVTMTTTAAEVTTTTAAAAEATTTAAEATTTAAEATTTA 376
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 77 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATA 223
+ +E +T ++ + TTT A+ +T +TT AA E+ + A A
Sbjct: 317 TAAEVTTTTTATEVTTTTTAAEVTMTTTAAEVTTTTAAAAEATTTAAEA 365
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +2
Query: 95 STESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATA 223
+T ++ + TTTAA A + TA ++ TTA ATT + + TA
Sbjct: 358 ATTTAAEATTTAAEATT---TAAEATTTAAEATTTAAEATTTA 397
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 68 SKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAEPI 232
++ +T+ +T ++ + TTTAA A + TA ++ TTA ATT + + + + I
Sbjct: 356 AEATTTAAEATTTAAEATTTAAEATT---TAAEATTTAAEATTTAAEATTSYQSI 407
>SB_37758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 31.5 bits (68), Expect = 0.87
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 715 ILEKCAERWNTMSEKEKQRFHEMAEQDKHR 804
I + + WN++ +EKQ+F + AE+DK R
Sbjct: 227 ITKMLGQEWNSLLPEEKQKFLDEAEEDKKR 256
>SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1081
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +2
Query: 77 STSERYST---ESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPAS 211
ST E ST S+V PT+T + T+T TT +A TTESP S
Sbjct: 165 STVEPTSTVEPTSTVVPTSTVVPTSTVEPTSTVEPTTMMAPTTESPTS 212
>SB_32670| Best HMM Match : CIMR (HMM E-Value=0)
Length = 1441
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 606 RPYNKPRGRMTAYAFFVQTCREEHKKNTLMSVLYLQHSRKV 728
+PYN+P G + + C+E+HK NT ++ Y+Q + +V
Sbjct: 1103 KPYNQPVGGSSCPGGPIGGCQEDHKLNTGHNLGYVQSNPQV 1143
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2
Query: 77 STSERYSTESS--VDPTTTAAG-AKSNYSTATKSITTAVAATTESPASFATA 223
+T+E+ +T ++ V TTTAA S S TK+ T A A TT A+ TA
Sbjct: 1147 TTAEKATTTTAAMVKATTTAAAVTASTASVVTKTATVAAATTTAEKATTLTA 1198
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 98 TESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAEP 229
T ++ P TT A + TK TT + ATT++P + P
Sbjct: 6106 TSTTEPPVTTPTTAPTTTPPTTKQTTTQLPATTKAPTATKPTTP 6149
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 95 STESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAE 226
+ E+++ P TTAA + T T TTA TT +P + A AE
Sbjct: 1250 AAETTMAPETTAAETTAATVTTTTLETTAALETTMAPETTAAAE 1293
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 95 STESSVDPTTTAAGAKSNY-STATKSITTAVAATTESPASFATAE 226
S E++V P TTAA + T + TTA A TTE+ A AT +
Sbjct: 2057 SAETTVAPETTAAPDTTLVPDTTVAAETTAAAETTETTAVPATTD 2101
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +2
Query: 44 ESVKSRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPAS 211
E+ K R + ++T+ + +T + P S+ + T++ TTA ATT++P +
Sbjct: 1808 ETTKPRTTTPKTTTPKKTTAAKKAPLPVTHATTSHAPSTTENPTTARPATTKAPGA 1863
>SB_7134| Best HMM Match : HMG_box (HMM E-Value=2e-16)
Length = 228
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 715 ILEKCAERWNTMSEKEKQRFHEMAEQDKHR 804
+ + A+ WN + EK+ ++EM E+DK R
Sbjct: 89 LTKSLAKEWNNLLPDEKKVYYEMYERDKER 118
>SB_4659| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +1
Query: 439 YSSNNKLYKNTFKLFSNNRYRQHYRGNLPLYRSCSNRHSSKLYSKQQ*IRPGC 597
Y+ KLY N F R+ G+L Y C N+H + + GC
Sbjct: 103 YTVRTKLYNNVVSNFEAGEVREPIGGHLADYVDCPNKHLRQTFLHPDVQARGC 155
>SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 77 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFAT 220
+T+ +T ++ TTT A + +TAT + TT TT + + T
Sbjct: 5 TTTTTTTTTTTTTTTTTTAATTATITTATATTTTTTTTTTTTTTTTTT 52
>SB_21059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1024
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 739 WNTMSEKEKQRFHEMAEQDKHR 804
W+ MS+ +KQR+ + AE+DK R
Sbjct: 182 WSKMSQDDKQRYLDDAERDKER 203
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 77 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAAT-TESPASFATA 223
+T+ + ++V T TAA + + TAT ++T V AT T + A+ ATA
Sbjct: 711 TTTATATATATVTATVTAAASATAAVTATVTVTVTVTATVTVTAATAATA 760
>SB_25081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 470
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 74 QSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPAS 211
++T+ +T ++ TTTAA S + ++ TTA A TT + A+
Sbjct: 335 EATTTATATTTTAAITTTAATTTSEAAATAEATTTATATTTVTAAT 380
>SB_40497| Best HMM Match : NDT80_PhoG (HMM E-Value=5.1)
Length = 360
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 104 SSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAEP 229
+++ P+TT + STA TTA ATT++ A + T +P
Sbjct: 288 TTIKPSTTEESTTNEASTAEFESTTAAQATTKTEA-YTTKKP 328
>SB_18916| Best HMM Match : GPS (HMM E-Value=1e-17)
Length = 1470
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 104 SSVDPTTTAAGAKSNYSTATKSITTAVAATTESPAS 211
SSV PT+ A S+ +T T A TTE+PA+
Sbjct: 841 SSVKPTSNPATVLSDGTTENPETTEASKTTTEAPAT 876
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 95 STESSVDPTTTAAGAKSNY-STATKSITTAVAATTESPASFATAE 226
S E++V P TTAA + T + TTA A TTE+ A AT +
Sbjct: 244 SAETTVAPETTAAPDTTLVPDTTVAAETTAAAETTETTAVPATTD 288
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +2
Query: 56 SRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAEP 229
S++ S Q TS T +S TTT+ +++ S + + + T+ P+S + +P
Sbjct: 680 SKQTSTQQTSSSQQTSTSPPQTTTSPSQQTSTSPPQTTTSPSQQTTSPPPSSPSIGQP 737
>SB_18164| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 854
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/53 (26%), Positives = 20/53 (37%)
Frame = +1
Query: 439 YSSNNKLYKNTFKLFSNNRYRQHYRGNLPLYRSCSNRHSSKLYSKQQ*IRPGC 597
Y+ KLY F R+ G+L Y C N+H + + GC
Sbjct: 439 YTVRTKLYNKVVSNFEAGEVREPIGGHLADYVDCPNKHLGQTFRHPDVQARGC 491
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +2
Query: 44 ESVKSRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPAS 211
E+ R + ++T+ + +T + P S+ + T++ TTA ATT++P +
Sbjct: 207 ETTTPRTTTPETTTPKKTTAAKKAPLPVTHATTSHAPSTTENPTTARPATTKAPGA 262
>SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 35 VVAESVKSRKRSKQSTSERYSTESSV--DPTTTAAGAKSNYSTATKSITTAVAATTESPA 208
V+ S++S + STS S ESS+ + TT+ S++ S TT+V ++
Sbjct: 936 VLTSSMESSSMATTSTSSTPSFESSMTTNSTTSTPAEAVPISSSVSSTTTSVLTSSMESF 995
Query: 209 SFAT 220
S AT
Sbjct: 996 SMAT 999
>SB_58810| Best HMM Match : DUF1613 (HMM E-Value=1.8)
Length = 989
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/53 (26%), Positives = 20/53 (37%)
Frame = +1
Query: 439 YSSNNKLYKNTFKLFSNNRYRQHYRGNLPLYRSCSNRHSSKLYSKQQ*IRPGC 597
Y+ KLY F R+ G+L Y C N+H + + GC
Sbjct: 544 YTVRTKLYNKVVSNFEAGEVREPIGGHLADYVDCPNKHLGQTFRHPDVQARGC 596
>SB_53176| Best HMM Match : Homeobox (HMM E-Value=0)
Length = 373
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 98 TESSVDPTTTAAGAKSNYSTATKSITTA 181
T S DP T AAGA S+ +T T+ TA
Sbjct: 43 TSKSGDPATLAAGAGSSEATRTRRYRTA 70
>SB_35467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 541
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 77 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFA 217
++S + T S TT+ A A S+Y+ AT S ++ + +SFA
Sbjct: 72 TSSHAHVTSSYTHVTTSYAHATSSYAHATSSFAHVTSSYAHATSSFA 118
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +2
Query: 77 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAEP 229
+T+ T + PTT A + + AT A AA PA+ A A P
Sbjct: 129 ATTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPPAAAAAAPP 179
>SB_17966| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 437 NTAATTNSTRTHSSCSATTDTGSITE 514
NTA ++N+ R H++C T T S T+
Sbjct: 16 NTATSSNTKRQHATCRTNTATSSNTK 41
>SB_14763| Best HMM Match : Zona_pellucida (HMM E-Value=0)
Length = 689
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 56 SRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSIT-TAVAATTESPASFATAEPI 232
S S +++ ++ S+V TTT + +TAT + T TA A T + + AT I
Sbjct: 406 SNSNSNSNSNSNSNSNSTVTATTTTTVTVTTTATATATATATATATATVTTTATATVTVI 465
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 56 SRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATA 223
S S + + +T +V T TA + +TAT ++TT AT A+ ATA
Sbjct: 416 SNSNSNSTVTATTTTTVTVTTTATATATATATATATATVTTTATATVTVIAT-ATA 470
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,818,062
Number of Sequences: 59808
Number of extensions: 299518
Number of successful extensions: 1739
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1714
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2335516755
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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