Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0795
         (861 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0115 - 915142-915321,915397-915631,916301-916386,916474-91...   152   4e-37
01_01_0802 + 6246267-6247541,6247625-6247682,6247806-6248129,624...    32   0.68 
11_06_0210 + 21296782-21296909,21297135-21298844,21299127-212994...    29   3.6  
05_04_0238 - 19311916-19312299,19312606-19312662                       29   3.6  
10_08_0838 - 20927020-20927207,20927288-20927491,20927654-209282...    29   6.3  
06_01_0063 - 534138-534605                                             28   8.3  
05_06_0230 + 26585439-26586608                                         28   8.3  

>03_01_0115 -
           915142-915321,915397-915631,916301-916386,916474-916590,
           917271-917591,918386-918772
          Length = 441

 Score =  152 bits (368), Expect = 4e-37
 Identities = 79/184 (42%), Positives = 113/184 (61%), Gaps = 2/184 (1%)
 Frame = +2

Query: 248 LDLETYAASYTGFAKLYRLMFVADHC--PSLRLEALKMAISYVMTTYNVNLYHTLHKKLS 421
           LD+E YAA YTG  +L RL+F+A+ C   ++ LEAL+MA   +    +   +  +  K++
Sbjct: 34  LDVEAYAAQYTGRTRLARLLFIAERCGVEAVELEALRMAYDEIKRGEDTMFHREVTNKIN 93

Query: 422 EAVASAGLPDIAGSQDIPVLDTIWVESKTKKAAIKLEKLDTDLKNYKTNSIKESIRRGHD 601
             +     P  A       LD  W +S  ++A  + EKL+++L  Y+TN IKESIR G++
Sbjct: 94  GRLG----PKYA-------LDQAWTDSVNRRAEQRKEKLESELNGYRTNLIKESIRMGYN 142

Query: 602 DLGDHYLDCGDLTSALKCYSRARDYCTSGKHLVMMCLNVVKVSVYLQNWAHVLNYVSKAE 781
           D+GD +   G L+ A K Y R RDYCT+ KH+V MC+NV+ VS+ L  + HV NYVSKAE
Sbjct: 143 DIGDFFYAHGHLSDAFKSYIRTRDYCTTSKHIVQMCMNVILVSIELGQFPHVSNYVSKAE 202

Query: 782 ATPD 793
            TPD
Sbjct: 203 QTPD 206


>01_01_0802 +
           6246267-6247541,6247625-6247682,6247806-6248129,
           6248321-6248355
          Length = 563

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +2

Query: 140 PPIMFEMNTAEPMQVDI-PPEDNENNETECYVVENPTLDLETYAASYTG 283
           PP+   ++  EP  +DI PP++N  ++ E YV  +  + LE       G
Sbjct: 420 PPVQETLHNPEPESIDIEPPKENTADDNERYVGSSSPVHLEDQKGENAG 468


>11_06_0210 +
           21296782-21296909,21297135-21298844,21299127-21299418,
           21300210-21300519,21300890-21301110
          Length = 886

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = +2

Query: 578 ESIRRGH--DDLGDHYLDCGDLTSALKCYSRA 667
           + +R+G   ++LG  Y+DCG L  A +CY  A
Sbjct: 704 DRLRKGQALNNLGSVYVDCGKLDLAAECYINA 735


>05_04_0238 - 19311916-19312299,19312606-19312662
          Length = 146

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = -2

Query: 281 QYMTQRMFPNPRWGFQRRSIPSHCFHYLLGEYQPALV--QLCS 159
           Q +  R+ P PR   QR S   HCFH+    Y   LV  Q CS
Sbjct: 54  QVIELRLLPGPRPAMQRFS---HCFHFKWSSYDYFLVLDQRCS 93


>10_08_0838 -
           20927020-20927207,20927288-20927491,20927654-20928297,
           20928549-20928788,20928884-20928978,20929087-20929434,
           20929824-20930042,20930422-20930487,20931191-20931362,
           20931456-20931703,20931933-20932073,20932238-20932330,
           20932421-20932471,20933571-20933693,20933793-20934035,
           20934131-20934211,20935245-20935340,20935535-20936320,
           20936443-20937012,20937322-20937427,20938102-20938206,
           20938311-20938432,20939321-20939413,20940081-20940104
          Length = 1685

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +2

Query: 605 LGDHYLDCGDLTSALKCYSRA 667
           LG HY   GD   A KCY RA
Sbjct: 711 LGHHYALAGDAQRAAKCYQRA 731


>06_01_0063 - 534138-534605
          Length = 155

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = +2

Query: 236 ENPTLDLETYAASYTGFAKLYRLMFVADHCPSLRLEALKMAI 361
           ++PT     Y  SY+  ++  +L+ + DH P+LR +AL  ++
Sbjct: 42  DSPTAVDAEYDGSYSYSSQSSQLLELDDHSPALRFDALSSSL 83


>05_06_0230 + 26585439-26586608
          Length = 389

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +2

Query: 11  DET***RYLLKNTKRVVKL-RFSDELVFIVDSKFRVFSLKK 130
           DET   RYL+++ K+++ + R+S     +  S FRVF +KK
Sbjct: 235 DETVLARYLVESRKKLLMVVRYSSGRQHLPTSAFRVFQMKK 275


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,216,031
Number of Sequences: 37544
Number of extensions: 418148
Number of successful extensions: 1005
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)