Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0791
(505 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g15770.1 68415.m01808 glycine-rich protein contains a domain ... 30 0.77
At2g37520.1 68415.m04601 PHD finger family protein contains Pfam... 30 1.0
At2g26910.1 68415.m03228 ABC transporter family protein similar ... 30 1.0
At4g13670.1 68417.m02125 peptidoglycan-binding domain-containing... 29 1.8
At4g03230.1 68417.m00442 S-locus lectin protein kinase family pr... 29 1.8
At5g62130.1 68418.m07798 Per1-like protein-related 29 2.4
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 29 2.4
At5g24780.1 68418.m02926 vegetative storage protein 1 (VSP1) ide... 28 4.1
At3g03680.1 68416.m00371 C2 domain-containing protein contains I... 28 4.1
At1g20760.1 68414.m02600 calcium-binding EF hand family protein ... 28 4.1
At3g56520.1 68416.m06285 no apical meristem (NAM) family protein... 27 7.2
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 27 7.2
At3g16760.2 68416.m02140 tetratricopeptide repeat (TPR)-containi... 27 9.5
At3g16760.1 68416.m02139 tetratricopeptide repeat (TPR)-containi... 27 9.5
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 27 9.5
At1g01090.1 68414.m00011 pyruvate dehydrogenase E1 component alp... 27 9.5
>At2g15770.1 68415.m01808 glycine-rich protein contains a domain
related to blue copper-binding protein; similar to
Stellacyanin (SP:P00302) {Rhus vernicifera}
Length = 301
Score = 30.3 bits (65), Expect = 0.77
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 197 SFYYSSAHQWGADDTMAPRCGDGRCNRHTIWSWSSRGDGQESG 69
S+ Y S WG+D + G G + + WSW S D SG
Sbjct: 31 SWSYGSGWGWGSDGSSTSSSGTGSDSDGSSWSWGS-DDNSGSG 72
>At2g37520.1 68415.m04601 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 854
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Frame = -3
Query: 374 VVVRI--VSGLPAVGIGGC----SHDGSVCSHDG-SVCGDNRCVSSYHSGGCDPNGVC 222
+V+R+ V P IGGC SHD S+ D +V ++C YH G NG C
Sbjct: 557 IVIRLSRVVKAPESDIGGCVFCRSHDFSIGKFDDRTVILCDQCEKEYHVGCLRENGFC 614
>At2g26910.1 68415.m03228 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1420
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +1
Query: 259 LLTHRLSPHTLPSWLHTLPSWL 324
L HR H PSW +TLPSWL
Sbjct: 569 LYKHR-DLHFYPSWAYTLPSWL 589
>At4g13670.1 68417.m02125 peptidoglycan-binding domain-containing
protein similar to spore cortex-lytic enzyme prepeptide
(GI:1644192) [Bacillus cereus]; contains Pfam PF01471:
Putative peptidoglycan binding domain; contains Pfam
PF00684 : DnaJ central domain (4 repeats)
Length = 387
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -2
Query: 378 FSCCSDCFWFTSRGHRRVQPRWERVQPRWERVRRQSVREQLPQRGMR 238
FS S F+++ R + RW R + RW R ++ +RE+ QR +R
Sbjct: 33 FSIPSSIVCFSTQNPDREEVRWLREEQRWIREEQRWIREE--QRWIR 77
>At4g03230.1 68417.m00442 S-locus lectin protein kinase family
protein contains Pfam domins, PF00069: Protein kinase
domain, PF00954: S-locus glycoprotein family and
PF01453: Lectin (probable mannose binding)
Length = 852
Score = 29.1 bits (62), Expect = 1.8
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 332 GGCSHDGSVCSHDGSVCGD 276
GGCS + +C DG V GD
Sbjct: 330 GGCSRESRICGKDGVVVGD 348
>At5g62130.1 68418.m07798 Per1-like protein-related
Length = 343
Score = 28.7 bits (61), Expect = 2.4
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 113 CAYCSAHRRTLGPWYRQRPTGERWSSKNC 199
C + + + GPWY Q P RW +C
Sbjct: 53 CKFSADGKAIDGPWYMQEPLYLRWKQWDC 81
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 747
Score = 28.7 bits (61), Expect = 2.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 301 LHTLPSWLHPPMPTAGKPETIRTTTKL 381
L +P+WL PP+PT + E R + ++
Sbjct: 444 LSKIPNWLTPPLPTRKRSEPCRESKEI 470
>At5g24780.1 68418.m02926 vegetative storage protein 1 (VSP1)
identical to SP|O49195 Vegetative storage protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF03767: HAD superfamily (subfamily IIIB) phosphatase
Length = 270
Score = 27.9 bits (59), Expect = 4.1
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +1
Query: 316 SWLHPPMPTAGKPETIRTTTKLVIKRIKPL------KCNSQLTIYLGLRKFGMSYWKNL 474
SWL T G PET+ L+ I+P+ K S++T+ L+ G++ WK+L
Sbjct: 153 SWLESGESTPGLPETLHLYENLLELGIEPIIISDRWKKLSEVTVE-NLKAVGVTKWKHL 210
>At3g03680.1 68416.m00371 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1017
Score = 27.9 bits (59), Expect = 4.1
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +1
Query: 286 TLPSWLHTLPSWLHPP 333
T+ W+H + +W+HPP
Sbjct: 826 TIARWIHGIRTWVHPP 841
>At1g20760.1 68414.m02600 calcium-binding EF hand family protein
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain
Length = 1019
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 208 PGPAVFTTPALTSGALTIPWPQGAAMGAAIGTPYG 104
P PA + PA++S + P G+A+G+ TP G
Sbjct: 312 PRPAASSQPAVSSQGPSSGLPPGSAVGSGHSTPAG 346
>At3g56520.1 68416.m06285 no apical meristem (NAM) family protein
similar to nam-like protein 5 (GI:21105738 ) [Petunia x
hybrida]; hypothetical protein SENU5, senescence
up-regulated - Lycopersicon eculentum, PIR:T07182
Length = 175
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 149 PWYRQRPTGERWSSKNCWAGRHFLRK 226
P +R P G R+ S NC +FL+K
Sbjct: 3 PTHRALPVGFRFRSTNCEISNYFLKK 28
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -3
Query: 401 GLMRFITSLVVVRIVSGLPAVGIGGCSHDGSVCSHDGSV 285
G+M+ + + +++G P V + C DGS D SV
Sbjct: 627 GVMKGLEECMSTGVLAGFPVVDVRACLVDGSYHDVDSSV 665
>At3g16760.2 68416.m02140 tetratricopeptide repeat (TPR)-containing
protein low similarity to TPR-containing protein
involved in spermatogenesis TPIS [Mus musculus]
GI:6272682; contains Pfam profile PF00515:
tetratricopeptide repeat (TPR) domain
Length = 456
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 292 PSWLHTLPSWLHPPMPTAGKPETIRT 369
P+W PSW H P P K TIR+
Sbjct: 49 PAWQPGKPSWTHQPAP---KQSTIRS 71
>At3g16760.1 68416.m02139 tetratricopeptide repeat (TPR)-containing
protein low similarity to TPR-containing protein
involved in spermatogenesis TPIS [Mus musculus]
GI:6272682; contains Pfam profile PF00515:
tetratricopeptide repeat (TPR) domain
Length = 475
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 292 PSWLHTLPSWLHPPMPTAGKPETIRT 369
P+W PSW H P P K TIR+
Sbjct: 49 PAWQPGKPSWTHQPAP---KQSTIRS 71
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 26.6 bits (56), Expect = 9.5
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -3
Query: 173 QWGADD--TMAPRCGDGRCNRHTIWSWSSRGDGQESGEYN 60
+W A + T+A GD N+ TIW S D +E E+N
Sbjct: 367 EWSAHEASTLAVTSGD---NQLTIWDLSLEKDEEEEAEFN 403
>At1g01090.1 68414.m00011 pyruvate dehydrogenase E1 component alpha
subunit, chloroplast identical to pyruvate dehydrogenase
E1 alpha subunit GB:AAB86803 GI:2454182 from
[Arabidopsis thaliana]; identical to cDNA pyruvate
dehydrogenase E1 alpha subunit mRNA, nuclear gene
encoding plastid protein GI:2454181
Length = 428
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -3
Query: 230 GVCVRSGARPSSFYYSSAHQWGADDTMAPRCGDGRCN 120
G+ V +GA SS Y + DD GDG CN
Sbjct: 195 GIPVATGAAFSSKYRREVLKQDCDDVTVAFFGDGTCN 231
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,950,677
Number of Sequences: 28952
Number of extensions: 240779
Number of successful extensions: 706
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 898188928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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