Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0790
         (642 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0498 + 3734498-3734976,3736176-3736800                           32   0.45 
07_03_1153 + 24398122-24398747,24399326-24399542,24399741-244002...    29   3.1  
03_02_0915 + 12360079-12360095,12360225-12361353                       29   3.1  
07_01_0580 + 4316895-4317053,4317530-4318024,4318124-4319305           29   4.1  
01_06_0725 + 31508156-31508277,31508950-31509118,31509311-315094...    28   5.5  
09_04_0070 + 14308446-14308511,14308844-14309005,14309420-143094...    28   7.2  
07_01_0724 + 5529642-5531141                                           28   7.2  
05_06_0231 - 26587900-26587980,26588291-26588356,26588452-265885...    27   9.6  

>07_01_0498 + 3734498-3734976,3736176-3736800
          Length = 367

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -1

Query: 417 DVCSVSDNGVIGRIAQVIVDALPFLAVGGLARKV 316
           D    +D+GV+  IA  +VD   FLA GG+ R V
Sbjct: 26  DEAPAADDGVVEEIAIPVVDLAAFLASGGIGRDV 59


>07_03_1153 +
           24398122-24398747,24399326-24399542,24399741-24400220,
           24400801-24401007,24401112-24401249,24401317-24401538
          Length = 629

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +1

Query: 475 APDQRPPTD--PITPRPETLPMNQGCGWRNPDGVA 573
           A D  P TD  P+ P+P T     G  WRNP   A
Sbjct: 43  AADAAPATDAAPLPPKPSTGSPFYGENWRNPAAAA 77


>03_02_0915 + 12360079-12360095,12360225-12361353
          Length = 381

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +1

Query: 490 PPTDPITPRPETLPMNQGCGWRNPDGVAFRTTGDVDGETK 609
           PP + I       PM+QG G  + D  A  T  +VD E K
Sbjct: 42  PPAETIVELTTKKPMSQGGGGSSSDSGATSTGAEVDDEEK 81


>07_01_0580 + 4316895-4317053,4317530-4318024,4318124-4319305
          Length = 611

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +1

Query: 172 NMDTGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVP 297
           N++  D  +  + + TS++ P  L+P+  P+V   AP    P
Sbjct: 17  NVEASDDHAAFDAMATSSRRPPSLRPLRHPNVTSLAPVIFPP 58


>01_06_0725 +
           31508156-31508277,31508950-31509118,31509311-31509406,
           31510037-31510097,31510387-31510451,31511104-31511178,
           31511276-31511351,31512140-31512303,31512398-31512421
          Length = 283

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +3

Query: 486 ETANRSHHAQAGDPA-NEPGLRLAEP*RRCLP 578
           E   RSHH    D   N+PG+R  +  RRC P
Sbjct: 53  EEDTRSHHEALLDRTKNKPGIRAVDVRRRCCP 84


>09_04_0070 +
           14308446-14308511,14308844-14309005,14309420-14309473,
           14310009-14310073,14310391-14310459,14310590-14310767,
           14311085-14311231,14311316-14311432,14311507-14311619,
           14311703-14311781,14311892-14312020
          Length = 392

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +1

Query: 130 KLLFIGFLASACAQNMDTGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVP 297
           K+L   FL     Q   +       ++  ++  PPTQ  P    S A  AP+T VP
Sbjct: 63  KVLENSFLVIMLRQGKGSSSSAPATSKAPSNQAPPTQTVPAAPASQAPVAPATTVP 118


>07_01_0724 + 5529642-5531141
          Length = 499

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = +1

Query: 436 SGPCSSYIDVCCLAPDQRPPTDPITPRPETLPMNQGCGWRNP 561
           + P ++++   C A D+    DP + RP+ + ++   GW  P
Sbjct: 122 AAPFAAFLADACAAGDREGRPDPFSRRPDWVVVDFAHGWLPP 163


>05_06_0231 -
           26587900-26587980,26588291-26588356,26588452-26588597,
           26589182-26589374,26589465-26589515,26590165-26590311,
           26590365-26590463,26590557-26590760,26590839-26590887,
           26590979-26591074,26591367-26591457,26591753-26591823,
           26592170-26592222,26592740-26592828,26593322-26593517,
           26593975-26594088,26594217-26594291
          Length = 606

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = -2

Query: 200 IDSRSPVSMFCAHADARKPMNRSLYIFGYYSQNITLTISNSQCSS 66
           +  R+ V + C+H D RKP  R + I   +S   TL I +  CSS
Sbjct: 380 VHDRAQVFVSCSHGDVRKP--RYVGIVERWSSK-TLQIPSLSCSS 421


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,203,289
Number of Sequences: 37544
Number of extensions: 394785
Number of successful extensions: 1406
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1405
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)