Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0789
         (843 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    27   0.25 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   4.0  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +3

Query: 159 YVSFFFGYILCIVIS-FGGEIMWINLFQCPA*SHGFVNPKTLRGLRSSIDKTPLV 320
           Y  F++ Y LC+++  F G+   INL       +     K + GL  SI +  ++
Sbjct: 153 YFQFYYTYFLCVIVCIFRGKYRNINLLLTEQLQNRRFFAKKMEGLVCSIKELNMI 207


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
 Frame = +3

Query: 39  LNCIKFSCFNCE*SKYLYIINLT-----LHCFC*LVF-VNFL**EPYVSFFFGYILC 191
           L+ + F C+N     Y Y +++T     L   C   F V+ L   P++ F   ++LC
Sbjct: 43  LDSLVFKCYNLRRIYYFYCVSITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLC 99


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +2

Query: 113 LFLLISVREFFIIRAICEFFFWLYIVYSNIIW 208
           L LL+     FI   +  F+   Y++ + I+W
Sbjct: 235 LILLLMFTSHFIFIVVSIFYMSAYLISNPIMW 266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,381
Number of Sequences: 336
Number of extensions: 4106
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)