Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0780
         (781 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006405-1|AAH06405.1|  123|Homo sapiens thioredoxin-like 5 prot...   112   1e-24
AJ344101-1|CAC51435.1|  123|Homo sapiens putative 42-9-9 protein...   112   1e-24
AB065496-1|BAC05747.1|  309|Homo sapiens seven transmembrane hel...    31   6.1  

>BC006405-1|AAH06405.1|  123|Homo sapiens thioredoxin-like 5
           protein.
          Length = 123

 Score =  112 bits (270), Expect = 1e-24
 Identities = 54/122 (44%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
 Frame = +1

Query: 178 VDLKGFEEFSKYTRAIDSR-GPPVFFYFSGSKLPDGNSWCPDCVEAEPVVRHYLSELDKS 354
           V + GFEEF    RA++   G  +F YF+GSK   G SWCPDCV+AEPVVR  L  + + 
Sbjct: 7   VSVSGFEEFH---RAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEG 63

Query: 355 IIFVYVDVGDREYWKDKECPFRTDSRSKLMVIPTLIKWKGVQRLEGSQCSNRELLQMLFE 534
            +F+Y  VG++ YWKD    FR     K+  +PTL+K+   Q+L  S+C    L++MLF 
Sbjct: 64  CVFIYCQVGEKPYWKDPNNDFR--KNLKVTAVPTLLKYGTPQKLVESECLQANLVEMLFS 121

Query: 535 EE 540
           E+
Sbjct: 122 ED 123


>AJ344101-1|CAC51435.1|  123|Homo sapiens putative 42-9-9 protein
           protein.
          Length = 123

 Score =  112 bits (270), Expect = 1e-24
 Identities = 54/122 (44%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
 Frame = +1

Query: 178 VDLKGFEEFSKYTRAIDSR-GPPVFFYFSGSKLPDGNSWCPDCVEAEPVVRHYLSELDKS 354
           V + GFEEF    RA++   G  +F YF+GSK   G SWCPDCV+AEPVVR  L  + + 
Sbjct: 7   VSVSGFEEFH---RAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEG 63

Query: 355 IIFVYVDVGDREYWKDKECPFRTDSRSKLMVIPTLIKWKGVQRLEGSQCSNRELLQMLFE 534
            +F+Y  VG++ YWKD    FR     K+  +PTL+K+   Q+L  S+C    L++MLF 
Sbjct: 64  CVFIYCQVGEKPYWKDPNNDFR--KNLKVTAVPTLLKYGTPQKLVESECLQANLVEMLFS 121

Query: 535 EE 540
           E+
Sbjct: 122 ED 123


>AB065496-1|BAC05747.1|  309|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 309

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = -2

Query: 636 FMVDNIIYSYVIVGNLSIRICLKRIGDFSYLIFFFEQHLQKFPIAALASLKP 481
           F+V  +IY   I+GN  I + +     F  L +FF QHL    I   +++ P
Sbjct: 28  FIVFLLIYVTSIMGNSGIILLINTDSRFQTLTYFFLQHLAFVDICYTSAITP 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,964,708
Number of Sequences: 237096
Number of extensions: 1994444
Number of successful extensions: 3770
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3768
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)