BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0780 (781 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC006405-1|AAH06405.1| 123|Homo sapiens thioredoxin-like 5 prot... 112 1e-24 AJ344101-1|CAC51435.1| 123|Homo sapiens putative 42-9-9 protein... 112 1e-24 AB065496-1|BAC05747.1| 309|Homo sapiens seven transmembrane hel... 31 6.1 >BC006405-1|AAH06405.1| 123|Homo sapiens thioredoxin-like 5 protein. Length = 123 Score = 112 bits (270), Expect = 1e-24 Identities = 54/122 (44%), Positives = 75/122 (61%), Gaps = 1/122 (0%) Frame = +1 Query: 178 VDLKGFEEFSKYTRAIDSR-GPPVFFYFSGSKLPDGNSWCPDCVEAEPVVRHYLSELDKS 354 V + GFEEF RA++ G +F YF+GSK G SWCPDCV+AEPVVR L + + Sbjct: 7 VSVSGFEEFH---RAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEG 63 Query: 355 IIFVYVDVGDREYWKDKECPFRTDSRSKLMVIPTLIKWKGVQRLEGSQCSNRELLQMLFE 534 +F+Y VG++ YWKD FR K+ +PTL+K+ Q+L S+C L++MLF Sbjct: 64 CVFIYCQVGEKPYWKDPNNDFR--KNLKVTAVPTLLKYGTPQKLVESECLQANLVEMLFS 121 Query: 535 EE 540 E+ Sbjct: 122 ED 123 >AJ344101-1|CAC51435.1| 123|Homo sapiens putative 42-9-9 protein protein. Length = 123 Score = 112 bits (270), Expect = 1e-24 Identities = 54/122 (44%), Positives = 75/122 (61%), Gaps = 1/122 (0%) Frame = +1 Query: 178 VDLKGFEEFSKYTRAIDSR-GPPVFFYFSGSKLPDGNSWCPDCVEAEPVVRHYLSELDKS 354 V + GFEEF RA++ G +F YF+GSK G SWCPDCV+AEPVVR L + + Sbjct: 7 VSVSGFEEFH---RAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEG 63 Query: 355 IIFVYVDVGDREYWKDKECPFRTDSRSKLMVIPTLIKWKGVQRLEGSQCSNRELLQMLFE 534 +F+Y VG++ YWKD FR K+ +PTL+K+ Q+L S+C L++MLF Sbjct: 64 CVFIYCQVGEKPYWKDPNNDFR--KNLKVTAVPTLLKYGTPQKLVESECLQANLVEMLFS 121 Query: 535 EE 540 E+ Sbjct: 122 ED 123 >AB065496-1|BAC05747.1| 309|Homo sapiens seven transmembrane helix receptor protein. Length = 309 Score = 30.7 bits (66), Expect = 6.1 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = -2 Query: 636 FMVDNIIYSYVIVGNLSIRICLKRIGDFSYLIFFFEQHLQKFPIAALASLKP 481 F+V +IY I+GN I + + F L +FF QHL I +++ P Sbjct: 28 FIVFLLIYVTSIMGNSGIILLINTDSRFQTLTYFFLQHLAFVDICYTSAITP 79 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 99,964,708 Number of Sequences: 237096 Number of extensions: 1994444 Number of successful extensions: 3770 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3609 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3768 length of database: 76,859,062 effective HSP length: 89 effective length of database: 55,757,518 effective search space used: 9478778060 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -