BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0779 (652 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosacchar... 27 3.1 SPBC16D10.04c |dna2||DNA replication endonuclease-helicase Dna2|... 26 4.1 SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 26 4.1 SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2 |Sc... 26 5.4 SPBC800.07c |tsf1||mitochondrial translation elongation factor E... 25 9.5 >SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosaccharomyces pombe|chr 1|||Manual Length = 832 Score = 26.6 bits (56), Expect = 3.1 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 7/57 (12%) Frame = +1 Query: 499 RSKVNETKTIDRKVSDIIRHL-------RYNPGTYDSDIALLKLAERVDLSSALKRV 648 + KV TKT+++ SDI++ R+ PGT+ + + + +D ++A + V Sbjct: 387 KKKVPVTKTLEQMASDIVKKTGFFCTADRFFPGTFQTGVVRTNCVDCLDRTNAAQFV 443 >SPBC16D10.04c |dna2||DNA replication endonuclease-helicase Dna2|Schizosaccharomyces pombe|chr 2|||Manual Length = 1398 Score = 26.2 bits (55), Expect = 4.1 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%) Frame = +1 Query: 334 YETKETEYPWMAALLYGGRFYCGGALISD-LYVLTAAHCTSG 456 Y E + L+YGG CG IS +L AH + G Sbjct: 1132 YRMNEDINSLSSELIYGGNLVCGSKTISQKKLILPKAHLSDG 1173 >SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr 1|||Manual Length = 503 Score = 26.2 bits (55), Expect = 4.1 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = +2 Query: 491 STIVLK*TKLKR*TERCLTSFV-ICGIIPELTTVIS 595 +TI+LK +L + CLT FV CG P + V+S Sbjct: 189 NTIILKTAELTPLSALCLTKFVPECGFPPGVINVLS 224 >SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2 |Schizosaccharomyces pombe|chr 2|||Manual Length = 611 Score = 25.8 bits (54), Expect = 5.4 Identities = 10/27 (37%), Positives = 16/27 (59%) Frame = +1 Query: 370 ALLYGGRFYCGGALISDLYVLTAAHCT 450 A +YGGR L++D+YV+ C+ Sbjct: 44 AFVYGGRDALNAQLVNDMYVVDLNTCS 70 >SPBC800.07c |tsf1||mitochondrial translation elongation factor EF-Ts Tsf1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 299 Score = 25.0 bits (52), Expect = 9.5 Identities = 10/36 (27%), Positives = 16/36 (44%) Frame = +2 Query: 317 GASWADMKRKRRSTPGWPLFCTAEDSIVVVHLSVIC 424 G A+ + R + GW + C +ED V + C Sbjct: 78 GGKLAEKSKNRTAKEGWIIQCISEDGRKAVMAEINC 113 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,686,535 Number of Sequences: 5004 Number of extensions: 54159 Number of successful extensions: 141 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 138 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 141 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 293780908 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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