BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0779 (652 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_03_0715 + 20889399-20890111,20890950-20891060,20891128-208913... 32 0.46 02_05_0967 - 33148283-33148524,33148602-33148881,33148959-331491... 30 1.4 10_01_0341 - 3758835-3759599,3760302-3760349 29 2.4 06_03_0223 - 18391177-18391287,18391570-18392081,18392200-183930... 29 4.2 08_02_1096 - 24280910-24281195,24281326-24281711 28 5.6 07_03_0716 + 20905041-20905851,20906644-20906825,20907117-209073... 28 5.6 02_05_0958 + 33073302-33073442,33073839-33073913,33074382-330744... 28 7.4 11_04_0460 - 17955102-17955146,17955253-17955310,17955442-179555... 27 9.8 04_04_0322 - 24374624-24377698 27 9.8 04_04_0298 + 24228569-24228763,24229792-24229900,24230001-242300... 27 9.8 03_02_0411 + 8217324-8218172 27 9.8 02_04_0193 - 20801959-20802583,20803372-20803448,20803530-208036... 27 9.8 >07_03_0715 + 20889399-20890111,20890950-20891060,20891128-20891338, 20891414-20891474,20891719-20891956,20892046-20892196, 20892415-20892703,20893464-20894207,20894720-20894851, 20895728-20895965,20896159-20896246,20896422-20896697 Length = 1083 Score = 31.9 bits (69), Expect = 0.46 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +1 Query: 262 DDPPEDCPSCQCGIARTRRRIVGG 333 D PPE C SC G+ RRR +GG Sbjct: 200 DMPPERCRSCLDGVVAERRRKIGG 223 >02_05_0967 - 33148283-33148524,33148602-33148881,33148959-33149151, 33149244-33149324,33149395-33149520,33149758-33150137, 33150367-33150394,33150816-33150979,33151920-33152039, 33152168-33152416 Length = 620 Score = 30.3 bits (65), Expect = 1.4 Identities = 11/28 (39%), Positives = 19/28 (67%) Frame = +1 Query: 127 VIMICLVGWSSCYTQRPIGQKDKGFIDW 210 +++I LV W CY P+ +K+K F+D+ Sbjct: 108 IVVIWLVNWQ-CYNIAPVAEKEKIFVDF 134 >10_01_0341 - 3758835-3759599,3760302-3760349 Length = 270 Score = 29.5 bits (63), Expect = 2.4 Identities = 18/65 (27%), Positives = 32/65 (49%) Frame = -3 Query: 521 LVSFTLERSCSKNRTVIRSLRNPEVQ*AAVKTYRSLISAPPQ*NLPPYKRAAIQGYSVSF 342 ++ T+ ++ + RTV+R + + AAV+T + + PP N PP ++ SV Sbjct: 80 MLEVTIPKNTNLRRTVVRIGQQSQSP-AAVRTAQPKVVDPPPANSPPKNNNLVRNTSVQS 138 Query: 341 VSYPP 327 PP Sbjct: 139 RIDPP 143 >06_03_0223 - 18391177-18391287,18391570-18392081,18392200-18393019, 18393603-18393671,18393973-18394062,18395381-18395575 Length = 598 Score = 28.7 bits (61), Expect = 4.2 Identities = 21/97 (21%), Positives = 39/97 (40%) Frame = +3 Query: 99 YFVINNEMASDYDLPGWLVELLHPAAHRSEG*RIYRLDQQSPWRHNDYHDFKTYRRPARG 278 +F + E + + + W ++L P HR + + WR YH+ K Y+ + Sbjct: 446 HFPVELEHRAHWAIRTWNMDLTGPGQHRK-----MQHSELEEWRDKAYHNAKIYKDRTKR 500 Query: 279 LPKLSMRHSTHSSAHRGRI*NERDGVPLDGRSFVRRK 389 ++H + + + N R V L G +R K Sbjct: 501 WHDKRIKHKEFKAGDKVLLFNSR--VKLFGHGKLRSK 535 >08_02_1096 - 24280910-24281195,24281326-24281711 Length = 223 Score = 28.3 bits (60), Expect = 5.6 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +2 Query: 341 RKRRSTPGWPLFCTAEDSIVVVHLSVIC 424 R+RR+ PG PL+ D + V S+IC Sbjct: 196 RRRRNVPGEPLYLWRADELHVYVRSIIC 223 >07_03_0716 + 20905041-20905851,20906644-20906825,20907117-20907330, 20907416-20907653,20907905-20908058,20908190-20908461, 20908703-20908808 Length = 658 Score = 28.3 bits (60), Expect = 5.6 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = +1 Query: 268 PPEDCPSCQCGIARTRRRIVGG 333 PPE+C SC GI +++VGG Sbjct: 214 PPENCRSCLDGIIDEGKKMVGG 235 >02_05_0958 + 33073302-33073442,33073839-33073913,33074382-33074497, 33076863-33076977,33077100-33077228,33078907-33078954, 33079343-33079469,33079634-33079789,33080031-33080287, 33080431-33080580,33080660-33080714,33080793-33081088, 33081252-33081335,33081869-33081941,33082164-33082291, 33082905-33083090,33083179-33083316,33083394-33083519, 33083705-33083965 Length = 886 Score = 27.9 bits (59), Expect = 7.4 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = +1 Query: 472 ITVRFLEHDRSKVNETKTIDRKVSDIIRHLRYNPGTYDSDI 594 +T R EH SK + + +SD++RHL N SD+ Sbjct: 324 VTTRLAEH--SKAQSSTALMAAISDMVRHLSKNMQLLVSDV 362 >11_04_0460 - 17955102-17955146,17955253-17955310,17955442-17955593, 17955888-17955993,17956101-17956222,17956766-17956834, 17956969-17957214,17957331-17957373,17957449-17957520, 17957954-17958066,17958158-17958238,17958343-17958415, 17959413-17959519,17960410-17960514,17960684-17960974, 17961621-17961707,17961774-17961842,17961917-17961973, 17962057-17962155,17962223-17962312,17962395-17962511, 17964164-17964244,17964353-17964502,17964812-17964956, 17967359-17967510,17967647-17967784,17967838-17967914, 17968032-17968134 Length = 1015 Score = 27.5 bits (58), Expect = 9.8 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -2 Query: 600 KGDITVVSSGIIPQMTNDVRHLSVYRFSFV 511 K T S +IPQM + + HL Y F+F+ Sbjct: 418 KAKATEYSEPLIPQMEDFLPHLQPYAFAFI 447 >04_04_0322 - 24374624-24377698 Length = 1024 Score = 27.5 bits (58), Expect = 9.8 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Frame = -3 Query: 533 LSIVLVSFTLERSCSKNRTVIRSLRNPEVQ*AAVKTYRSLISAPPQ*NLPPYK---RAAI 363 LS+ L + + CS N R L N + R L+ Q P Y R AI Sbjct: 771 LSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAI 830 Query: 362 QGYSVSFVS 336 QG+S SF++ Sbjct: 831 QGFSKSFIA 839 >04_04_0298 + 24228569-24228763,24229792-24229900,24230001-24230069, 24230159-24230262,24230361-24230490,24231270-24231374, 24231479-24231689,24231917-24231927,24232331-24232341, 24233863-24233979,24234376-24234441,24234728-24234790, 24236577-24236652,24238003-24238064,24238573-24238658, 24238978-24239026,24239099-24239279,24239448-24239596, 24239682-24239750,24240920-24240991,24241122-24241269, 24241403-24241498,24242024-24242094,24242223-24242338, 24242453-24242498,24242611-24242781 Length = 860 Score = 27.5 bits (58), Expect = 9.8 Identities = 10/31 (32%), Positives = 19/31 (61%) Frame = +1 Query: 529 DRKVSDIIRHLRYNPGTYDSDIALLKLAERV 621 + +SD ++H++Y G+YDS KL + + Sbjct: 479 EEHLSDFLQHIKYVSGSYDSGEGFEKLNKEI 509 >03_02_0411 + 8217324-8218172 Length = 282 Score = 27.5 bits (58), Expect = 9.8 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = -1 Query: 400 HNRIFRRTKERPSRGTPSLSFHIRP 326 H FRRT+ERP RG F P Sbjct: 36 HRPRFRRTRERPRRGGGDRQFRAAP 60 >02_04_0193 - 20801959-20802583,20803372-20803448,20803530-20803646, 20804147-20804250,20804359-20804428,20804547-20804644, 20804747-20804840,20805269-20805359,20805453-20805545, 20805635-20805960,20806162-20806641 Length = 724 Score = 27.5 bits (58), Expect = 9.8 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = -2 Query: 399 TIESSAVQKS-GHPGVLRLFRFISAHDAPTSACYAALTAW 283 T + A++++ G P V+++ F A A T AC L W Sbjct: 515 TARNDAMRRAAGQPDVIKIETFYHADKAKTEACILDLVLW 554 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,307,395 Number of Sequences: 37544 Number of extensions: 388907 Number of successful extensions: 938 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 913 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 938 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1620349964 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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