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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0779
         (652 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0715 + 20889399-20890111,20890950-20891060,20891128-208913...    32   0.46 
02_05_0967 - 33148283-33148524,33148602-33148881,33148959-331491...    30   1.4  
10_01_0341 - 3758835-3759599,3760302-3760349                           29   2.4  
06_03_0223 - 18391177-18391287,18391570-18392081,18392200-183930...    29   4.2  
08_02_1096 - 24280910-24281195,24281326-24281711                       28   5.6  
07_03_0716 + 20905041-20905851,20906644-20906825,20907117-209073...    28   5.6  
02_05_0958 + 33073302-33073442,33073839-33073913,33074382-330744...    28   7.4  
11_04_0460 - 17955102-17955146,17955253-17955310,17955442-179555...    27   9.8  
04_04_0322 - 24374624-24377698                                         27   9.8  
04_04_0298 + 24228569-24228763,24229792-24229900,24230001-242300...    27   9.8  
03_02_0411 + 8217324-8218172                                           27   9.8  
02_04_0193 - 20801959-20802583,20803372-20803448,20803530-208036...    27   9.8  

>07_03_0715 +
           20889399-20890111,20890950-20891060,20891128-20891338,
           20891414-20891474,20891719-20891956,20892046-20892196,
           20892415-20892703,20893464-20894207,20894720-20894851,
           20895728-20895965,20896159-20896246,20896422-20896697
          Length = 1083

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +1

Query: 262 DDPPEDCPSCQCGIARTRRRIVGG 333
           D PPE C SC  G+   RRR +GG
Sbjct: 200 DMPPERCRSCLDGVVAERRRKIGG 223


>02_05_0967 -
           33148283-33148524,33148602-33148881,33148959-33149151,
           33149244-33149324,33149395-33149520,33149758-33150137,
           33150367-33150394,33150816-33150979,33151920-33152039,
           33152168-33152416
          Length = 620

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +1

Query: 127 VIMICLVGWSSCYTQRPIGQKDKGFIDW 210
           +++I LV W  CY   P+ +K+K F+D+
Sbjct: 108 IVVIWLVNWQ-CYNIAPVAEKEKIFVDF 134


>10_01_0341 - 3758835-3759599,3760302-3760349
          Length = 270

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 18/65 (27%), Positives = 32/65 (49%)
 Frame = -3

Query: 521 LVSFTLERSCSKNRTVIRSLRNPEVQ*AAVKTYRSLISAPPQ*NLPPYKRAAIQGYSVSF 342
           ++  T+ ++ +  RTV+R  +  +   AAV+T +  +  PP  N PP     ++  SV  
Sbjct: 80  MLEVTIPKNTNLRRTVVRIGQQSQSP-AAVRTAQPKVVDPPPANSPPKNNNLVRNTSVQS 138

Query: 341 VSYPP 327
              PP
Sbjct: 139 RIDPP 143


>06_03_0223 -
           18391177-18391287,18391570-18392081,18392200-18393019,
           18393603-18393671,18393973-18394062,18395381-18395575
          Length = 598

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 21/97 (21%), Positives = 39/97 (40%)
 Frame = +3

Query: 99  YFVINNEMASDYDLPGWLVELLHPAAHRSEG*RIYRLDQQSPWRHNDYHDFKTYRRPARG 278
           +F +  E  + + +  W ++L  P  HR       +  +   WR   YH+ K Y+   + 
Sbjct: 446 HFPVELEHRAHWAIRTWNMDLTGPGQHRK-----MQHSELEEWRDKAYHNAKIYKDRTKR 500

Query: 279 LPKLSMRHSTHSSAHRGRI*NERDGVPLDGRSFVRRK 389
                ++H    +  +  + N R  V L G   +R K
Sbjct: 501 WHDKRIKHKEFKAGDKVLLFNSR--VKLFGHGKLRSK 535


>08_02_1096 - 24280910-24281195,24281326-24281711
          Length = 223

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 341 RKRRSTPGWPLFCTAEDSIVVVHLSVIC 424
           R+RR+ PG PL+    D + V   S+IC
Sbjct: 196 RRRRNVPGEPLYLWRADELHVYVRSIIC 223


>07_03_0716 +
           20905041-20905851,20906644-20906825,20907117-20907330,
           20907416-20907653,20907905-20908058,20908190-20908461,
           20908703-20908808
          Length = 658

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 268 PPEDCPSCQCGIARTRRRIVGG 333
           PPE+C SC  GI    +++VGG
Sbjct: 214 PPENCRSCLDGIIDEGKKMVGG 235


>02_05_0958 +
           33073302-33073442,33073839-33073913,33074382-33074497,
           33076863-33076977,33077100-33077228,33078907-33078954,
           33079343-33079469,33079634-33079789,33080031-33080287,
           33080431-33080580,33080660-33080714,33080793-33081088,
           33081252-33081335,33081869-33081941,33082164-33082291,
           33082905-33083090,33083179-33083316,33083394-33083519,
           33083705-33083965
          Length = 886

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 472 ITVRFLEHDRSKVNETKTIDRKVSDIIRHLRYNPGTYDSDI 594
           +T R  EH  SK   +  +   +SD++RHL  N     SD+
Sbjct: 324 VTTRLAEH--SKAQSSTALMAAISDMVRHLSKNMQLLVSDV 362


>11_04_0460 -
           17955102-17955146,17955253-17955310,17955442-17955593,
           17955888-17955993,17956101-17956222,17956766-17956834,
           17956969-17957214,17957331-17957373,17957449-17957520,
           17957954-17958066,17958158-17958238,17958343-17958415,
           17959413-17959519,17960410-17960514,17960684-17960974,
           17961621-17961707,17961774-17961842,17961917-17961973,
           17962057-17962155,17962223-17962312,17962395-17962511,
           17964164-17964244,17964353-17964502,17964812-17964956,
           17967359-17967510,17967647-17967784,17967838-17967914,
           17968032-17968134
          Length = 1015

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 600 KGDITVVSSGIIPQMTNDVRHLSVYRFSFV 511
           K   T  S  +IPQM + + HL  Y F+F+
Sbjct: 418 KAKATEYSEPLIPQMEDFLPHLQPYAFAFI 447


>04_04_0322 - 24374624-24377698
          Length = 1024

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
 Frame = -3

Query: 533 LSIVLVSFTLERSCSKNRTVIRSLRNPEVQ*AAVKTYRSLISAPPQ*NLPPYK---RAAI 363
           LS+ L +    + CS N    R L N       +   R L+    Q   P Y    R AI
Sbjct: 771 LSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAI 830

Query: 362 QGYSVSFVS 336
           QG+S SF++
Sbjct: 831 QGFSKSFIA 839


>04_04_0298 +
           24228569-24228763,24229792-24229900,24230001-24230069,
           24230159-24230262,24230361-24230490,24231270-24231374,
           24231479-24231689,24231917-24231927,24232331-24232341,
           24233863-24233979,24234376-24234441,24234728-24234790,
           24236577-24236652,24238003-24238064,24238573-24238658,
           24238978-24239026,24239099-24239279,24239448-24239596,
           24239682-24239750,24240920-24240991,24241122-24241269,
           24241403-24241498,24242024-24242094,24242223-24242338,
           24242453-24242498,24242611-24242781
          Length = 860

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +1

Query: 529 DRKVSDIIRHLRYNPGTYDSDIALLKLAERV 621
           +  +SD ++H++Y  G+YDS     KL + +
Sbjct: 479 EEHLSDFLQHIKYVSGSYDSGEGFEKLNKEI 509


>03_02_0411 + 8217324-8218172
          Length = 282

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -1

Query: 400 HNRIFRRTKERPSRGTPSLSFHIRP 326
           H   FRRT+ERP RG     F   P
Sbjct: 36  HRPRFRRTRERPRRGGGDRQFRAAP 60


>02_04_0193 -
           20801959-20802583,20803372-20803448,20803530-20803646,
           20804147-20804250,20804359-20804428,20804547-20804644,
           20804747-20804840,20805269-20805359,20805453-20805545,
           20805635-20805960,20806162-20806641
          Length = 724

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -2

Query: 399 TIESSAVQKS-GHPGVLRLFRFISAHDAPTSACYAALTAW 283
           T  + A++++ G P V+++  F  A  A T AC   L  W
Sbjct: 515 TARNDAMRRAAGQPDVIKIETFYHADKAKTEACILDLVLW 554


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,307,395
Number of Sequences: 37544
Number of extensions: 388907
Number of successful extensions: 938
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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