Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0777
         (828 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    23   3.9  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    23   3.9  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   9.0  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   9.0  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   9.0  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   9.0  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   9.0  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   9.0  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   9.0  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   9.0  

>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +3

Query: 111 RDYINSWVSRVTKNHISDLIPAS 179
           R+++  W++ VT+ H    +P+S
Sbjct: 41  REHVAQWINLVTQQHGLPEVPSS 63


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +3

Query: 111 RDYINSWVSRVTKNHISDLIPAS 179
           R+++  W++ VT+ H    +P+S
Sbjct: 41  REHVAQWINLVTQQHGLPEVPSS 63


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 544 FPWRGRYHLEKSWKNLGSE 600
           +PW  R HL +S  N   E
Sbjct: 201 YPWMKRVHLGQSTVNANGE 219


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 544 FPWRGRYHLEKSWKNLGSE 600
           +PW  R HL +S  N   E
Sbjct: 201 YPWMKRVHLGQSTVNANGE 219


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 544 FPWRGRYHLEKSWKNLGSE 600
           +PW  R HL +S  N   E
Sbjct: 201 YPWMKRVHLGQSTVNANGE 219


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 544 FPWRGRYHLEKSWKNLGSE 600
           +PW  R HL +S  N   E
Sbjct: 201 YPWMKRVHLGQSTVNANGE 219


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 544 FPWRGRYHLEKSWKNLGSE 600
           +PW  R HL +S  N   E
Sbjct: 201 YPWMKRVHLGQSTVNANGE 219


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 544 FPWRGRYHLEKSWKNLGSE 600
           +PW  R HL +S  N   E
Sbjct: 157 YPWMKRVHLGQSTVNANGE 175


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 544 FPWRGRYHLEKSWKNLGSE 600
           +PW  R HL +S  N   E
Sbjct: 201 YPWMKRVHLGQSTVNANGE 219


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 544 FPWRGRYHLEKSWKNLGSE 600
           +PW  R HL +S  N   E
Sbjct: 201 YPWMKRVHLGQSTVNANGE 219


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,647
Number of Sequences: 336
Number of extensions: 4462
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)