Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0777
(828 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38975| Best HMM Match : Serpin (HMM E-Value=0) 170 1e-42
SB_55237| Best HMM Match : Serpin (HMM E-Value=0) 164 9e-41
SB_55238| Best HMM Match : Serpin (HMM E-Value=0) 157 1e-38
SB_29430| Best HMM Match : AhpC-TSA (HMM E-Value=0.00012) 32 0.65
SB_53143| Best HMM Match : PKD (HMM E-Value=2.7e-18) 31 1.5
SB_38465| Best HMM Match : Nitrophorin (HMM E-Value=0.75) 29 3.5
SB_39107| Best HMM Match : Lyase_8 (HMM E-Value=0.016) 29 4.6
SB_13097| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_33855| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_10791| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
Length = 380
Score = 170 bits (414), Expect = 1e-42
Identities = 98/282 (34%), Positives = 155/282 (54%), Gaps = 7/282 (2%)
Frame = +3
Query: 3 ANKLFAADDLNV----RQCMLDLFAEDLETLNFRENPGAARDYINSWVSRVTKNHISDLI 170
AN+LFA + ++ + F+ ++ +++ +N ARD +N WV + TK+ I +LI
Sbjct: 90 ANRLFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQKTKDKIKNLI 149
Query: 171 PASGISQTTRLVLANAAYFKGVWASKFPAERTRKEAFFVSETRQTLVPFMKQKGTFHYMV 350
P ++ T L L NA YFKG W F T+ F + +++ V FM Q F Y+
Sbjct: 150 PEGMFNKDTILCLVNAVYFKGSWMKHFNRNATQSGKFKTTPSQEIQVQFMYQSSEFRYLE 209
Query: 351 SDELGAQILELPYKGSDISMYILLPPYSMKEGVSNIIANLTPERL--AAVVEESYMGREV 524
S LG QI+ELPY G +SM +LLP + +G+ + ++L E L A + EV
Sbjct: 210 SSTLGCQIVELPYAGEKLSMVVLLP--NEVDGLGKLESSLNKETLQEAMTSLRNSHPEEV 267
Query: 525 IVEIPKFSMERSLPLREILEKLGVGDLFN-GTADFSTLTEQHGILFDDAIHKAKIDVNEE 701
V +PKF++ + L E L+ +G DLF+ G AD S ++ ++ + +HKA ++VNEE
Sbjct: 268 EVTLPKFTLTQEFSLGETLKGMGASDLFSPGKADLSGISAA-PLVVSEVVHKAFVEVNEE 326
Query: 702 GTVAAAATAIFGFRSSRPAEPTRFVANFPFVYVLYERPTSSI 827
GT+AAAAT + S P P F AN PF++++ T ++
Sbjct: 327 GTIAAAATGVGIMLMSMPMNPV-FYANHPFLFLIRHNDTGAV 367
>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
Length = 363
Score = 164 bits (398), Expect = 9e-41
Identities = 94/281 (33%), Positives = 154/281 (54%), Gaps = 7/281 (2%)
Frame = +3
Query: 6 NKLFAADDLNVRQCML----DLFAEDLETLNFRENPGAARDYINSWVSRVTKNHISDLIP 173
NK++ D+ + + L + + ++ ++F AR +N+WV + TK +I +LIP
Sbjct: 59 NKIWGHDEFEILEEFLHGTREFYHSEMAQVDFVNKAFDARKEVNAWVHQQTKGNIKELIP 118
Query: 174 ASGISQTTRLVLANAAYFKGVWASKFPAERTRKEAFFVSETRQTL--VPFMKQKGTFHYM 347
I+ TRL++ NA YFKGVW +F E T AFFV E+ ++ V M +K ++
Sbjct: 119 HGVINSLTRLIIVNAVYFKGVWKKEFGEENTFHAAFFVPESHESKIEVEMMTRKMKVNFY 178
Query: 348 VSDELGAQILELPYKGSDISMYILLPPYSMKEGVSNIIANLTPERLAAVVEESYMGREVI 527
++ +++ELPY G D +M I+LP G+ ++ ++ E + + V
Sbjct: 179 YDADIKCRVVELPYSGDDTAMVIILP--EEPSGIFSLEKSIDVE-IMEKWRRLMINTTVE 235
Query: 528 VEIPKFSMERSLPLREILEKLGVGDLFNG-TADFSTLTEQHGILFDDAIHKAKIDVNEEG 704
V IPKF + + L LR +L+ LGV D+F+ AD S ++ G+ AIHKA I+VNE G
Sbjct: 236 VSIPKFRLSQKLELRSLLQDLGVSDIFDSRKADLSGISAAKGLYVSSAIHKAHIEVNERG 295
Query: 705 TVAAAATAIFGFRSSRPAEPTRFVANFPFVYVLYERPTSSI 827
TVAAA T + + S F A+ PF++ ++ +P+S+I
Sbjct: 296 TVAAATTGVVMAKRSLDMNEV-FYADHPFLFSIHHKPSSAI 335
>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
Length = 345
Score = 157 bits (381), Expect = 1e-38
Identities = 96/276 (34%), Positives = 149/276 (53%), Gaps = 9/276 (3%)
Frame = +3
Query: 3 ANKLFAADDLNVRQCMLDL----FAEDLETLNFRENPGAARDYINSWVSRVTKNHISDLI 170
AN LF D ++ + D+ + D+ ++++ + AR ++N WV TK I DLI
Sbjct: 53 ANNLFLQKDFSILKEFTDICQKYYDADISLVDYKTDFEGARKHVNQWVEERTKKKICDLI 112
Query: 171 PASGISQTTRLVLANAAYFKGVWASKFPAERTRKEAFFVSETRQTLVPFMKQKGTFHYMV 350
+ TRL L NA YFKG+W F E + F + + + V M QK F Y+
Sbjct: 113 APGVFNMLTRLTLVNAIYFKGMWDKPFKKEHSHSSEFRTTSSNEVEVEMMFQKSKFKYLH 172
Query: 351 SDELGAQILELPYKGSDISMYILLPPYSMKEGVSNIIANLTPERLAAVVE--ESYMGREV 524
SD+ ++LELPY + +SM ++LP + EG++ +LT +++ + S +V
Sbjct: 173 SDKYKCKLLELPYVDTQLSMVLVLPDET--EGLARFEQDLTHDKMTDIFNSVSSQRPADV 230
Query: 525 IVEIPKFSMERSLPLREILEKLGVGDLFN-GTADFSTLTEQHGILFDDAI-HKAKIDVNE 698
V IPKF M L E L++LG+ +F+ ADF+ ++ LF A+ HKA ++VNE
Sbjct: 231 EVYIPKFKMTSEFKLNEALQELGMKKMFDQAAADFTGISLPPEHLFVSAVLHKAFVEVNE 290
Query: 699 EGTVAAAAT-AIFGFRSSRPAEPTRFVANFPFVYVL 803
EGT AAAAT AI R + EP F A+ PF++++
Sbjct: 291 EGTEAAAATAAIMMMRCAIMREPLVFRADHPFLFLI 326
>SB_29430| Best HMM Match : AhpC-TSA (HMM E-Value=0.00012)
Length = 704
Score = 31.9 bits (69), Expect = 0.65
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 779 GNEAGRFCRSRRTEPEDGGRSCCHSTFFVNVNL 681
G A F RSRR++P +GGR FF+++ L
Sbjct: 234 GVTASFFSRSRRSDPINGGRKLGGGVFFISIGL 266
>SB_53143| Best HMM Match : PKD (HMM E-Value=2.7e-18)
Length = 2111
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -3
Query: 655 RMPCCSV----NVLKSAVPLNRSPTPSFSRISLSGSDLSMENLGISTMTSLPI 509
RM CC +L SA+ P P S + + LS+ LGI+ M+SL +
Sbjct: 1955 RMTCCLTLLISTMLASAMFYQTGPAPPSSEVVIGPLRLSVRQLGIAVMSSLVV 2007
>SB_38465| Best HMM Match : Nitrophorin (HMM E-Value=0.75)
Length = 1167
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -2
Query: 644 LLCQRTEVSCSIEQISDPKFFQDFSKW*RPLHGKLRN 534
LLCQ E CS+E+I + + S + +H L+N
Sbjct: 666 LLCQLDEGKCSVEEICSSQVVKRISTRLKAMHNSLKN 702
>SB_39107| Best HMM Match : Lyase_8 (HMM E-Value=0.016)
Length = 872
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 394 PLYGSSKICAPSSSLTI*WKVPFCFMNGTRVCLVSETK 281
P Y + + +P++S+T +K + F N VCLVS+ +
Sbjct: 321 PDYETKEQDSPAASMTFEFKKSYVFFNNLIVCLVSDVE 358
>SB_13097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 69 DLETLNFRENPGAARDYINSWVSRVTKNHISDLIPASGISQTTRL 203
D +L F + P ++ + + V +TK S+L+P SGI QTT L
Sbjct: 30 DRMSLAFTDVPQSSTIVLQTSV--ITKTQASNLLPKSGIPQTTAL 72
>SB_33855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 879
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = -3
Query: 745 ERNPKMAVAAAATVPSSLTSIFALCIASSNRMPCCSVNVLKSAVPLNRSPTPSFSRIS 572
E + +++A A T+ +S S + S++ + S+N +K VP + PT +F IS
Sbjct: 181 EFHSSVSIAPARTITTSEGS-YVQMTCSASAVDLSSINWVKDGVPQAKGPTLTFPSIS 237
>SB_10791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 510
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = -2
Query: 560 RPLHGKLRNLNDDF----SAHIALFYHSSQTLGGQVSDNITHSF 441
+PL GKL+ L D++ + + + Y + +T+ G +S H F
Sbjct: 152 KPLEGKLKPLMDNYKSPVNCEMLILYRTMKTMDGNISSMTRHCF 195
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,810,658
Number of Sequences: 59808
Number of extensions: 576487
Number of successful extensions: 1656
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1648
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2323539746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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