Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0777
         (828 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    26   0.49 
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   2.6  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    23   4.6  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   6.0  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              22   8.0  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 25.8 bits (54), Expect = 0.49
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +1

Query: 619 LTSVR*QSNTAFCSMMLYIKQRLTLTKKV 705
           LTS+  +SNT F +++ ++KQ+     K+
Sbjct: 329 LTSISVESNTMFINILKFLKQKYVKNSKL 357


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -2

Query: 731 DGGRSCCHSTFFVNVNLCFMYSIIEQNAVLLCQRT 627
           DG R+C  + F V      + +I+  + V +C++T
Sbjct: 439 DGPRNCIGARFAVYQTKVGLITILRNHKVEVCEKT 473


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 7/30 (23%), Positives = 17/30 (56%)
 Frame = -2

Query: 680 CFMYSIIEQNAVLLCQRTEVSCSIEQISDP 591
           C++      N + +C   +V+ +I +++DP
Sbjct: 121 CWLQMTKHHNFIKVCSVNDVNMTITELTDP 150


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 390 KGSDISMYILLPPYSMKE 443
           KG  + +   LPP SMKE
Sbjct: 519 KGETVGLLNALPPSSMKE 536


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = +3

Query: 606 FNGTADFSTLTEQHGILFDDAIHKAKIDVNEEGTVA 713
           ++   D  T   +  +  +D +H+  + VN+E  VA
Sbjct: 100 YHDDEDLKTFFHKIALTCEDDVHRKFLHVNDECDVA 135


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,889
Number of Sequences: 438
Number of extensions: 5232
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)