SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0775
         (809 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po...    30   0.45 
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch...    30   0.45 
SPBC1604.15 |gpi16||pig-T |Schizosaccharomyces pombe|chr 2|||Manual    29   0.59 
SPCC736.10c |mrps8||mitochondrial ribosomal protein subunit S8|S...    29   1.0  
SPCC126.04c |||SAGA complex subunit Sgf73 |Schizosaccharomyces p...    29   1.0  
SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex lar...    28   1.8  
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar...    28   1.8  
SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr...    27   2.4  
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    27   2.4  
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B...    27   3.2  
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||...    27   3.2  
SPBC56F2.11 |met6||homoserine O-acetyltransferase|Schizosaccharo...    27   3.2  
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos...    27   3.2  
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula...    27   4.2  
SPCC188.02 |par1||protein phosphatase regulatory subunit Par1 |S...    27   4.2  
SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S...    26   5.5  
SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase |Schizosac...    26   5.5  
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc...    26   5.5  
SPBC14C8.02 |tim44||TIM23 translocase complex subunit Tim44|Schi...    26   5.5  
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch...    26   5.5  
SPCC338.07c |||NatA N-acetyltransferase complex subunit |Schizos...    26   5.5  
SPAC323.08 |||ribonuclease MRP complex subunit |Schizosaccharomy...    26   7.3  
SPAC22E12.17c |glo3||ARF GTPase activating protein|Schizosacchar...    25   9.6  
SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyce...    25   9.6  
SPAC5D6.10c |mug116||sequence orphan|Schizosaccharomyces pombe|c...    25   9.6  

>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 670

 Score = 29.9 bits (64), Expect = 0.45
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +3

Query: 651 RMQNLEVENVMLKNELNVLNREVADLLEKLRKTQDGNKVEKVANGHAE 794
           R+  L  EN  LK +++ LN+E+  +  +L   +  N +EK  N   E
Sbjct: 216 RLDELMCENTALKEKIDKLNKELEKVEPQLTFLRSKNSIEKPRNFRRE 263


>SPCC162.08c |nup211||nuclear pore complex associated
            protein|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1837

 Score = 29.9 bits (64), Expect = 0.45
 Identities = 18/81 (22%), Positives = 38/81 (46%)
 Frame = +3

Query: 504  KSNQYTLDNCPDTLVCDTKGSNTDHFGLRQRRHSLPVDLEIVSDEEWTYRMQNLEVENVM 683
            KS    L +  D L  D     +    L+Q    +   +E  S++E+T  + ++    + 
Sbjct: 785  KSENLLLTSVKDKLKADLSNLESKLSSLQQDNFHMKAQIES-SNQEYTATVDSMNSRILE 843

Query: 684  LKNELNVLNREVADLLEKLRK 746
            L N+L V N ++++  + +R+
Sbjct: 844  LSNDLRVANSKLSECSDDVRR 864


>SPBC1604.15 |gpi16||pig-T |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 545

 Score = 29.5 bits (63), Expect = 0.59
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +3

Query: 468 RNGVVKTKKPLKKSNQYTLDNCPDTLVCDTKGSNTDHFGLRQRRHSLPVDLEIVS 632
           RNG  K K   +  ++Y  D   D+L C   G +T+H  +    H +P +  ++S
Sbjct: 247 RNGRRKGKTTFQPPSEYCHDEDMDSLHCLMSGYSTEHHTVDDLFHKVPKERCLLS 301


>SPCC736.10c |mrps8||mitochondrial ribosomal protein subunit
           S8|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 152

 Score = 28.7 bits (61), Expect = 1.0
 Identities = 18/75 (24%), Positives = 34/75 (45%)
 Frame = +3

Query: 336 RPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPVKGNQEPVRNGVVKTKKPLKKSNQ 515
           +P+   ++ +S  P  + N TP+  +   +    S V G  EP   G+V+TK  +   + 
Sbjct: 80  KPVLHYIRAVSK-PSRKVNLTPSELLQFAKGRKVSFVNG-LEPAEVGIVETKHGIMSIDD 137

Query: 516 YTLDNCPDTLVCDTK 560
              +N    ++C  K
Sbjct: 138 AIKNNLGGNVICRVK 152


>SPCC126.04c |||SAGA complex subunit Sgf73 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 344

 Score = 28.7 bits (61), Expect = 1.0
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = +3

Query: 399 PARKISPIQN---LNKSPVKGNQEPVRNGVVKTKK 494
           P  +  P+ N   LNK    GN  P++NGV  T K
Sbjct: 109 PKPQFEPVANSQVLNKDVNNGNNAPIKNGVKSTAK 143


>SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex large
            subunit Nuc1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1689

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = +3

Query: 582  GLRQRRHSLPVDLEIVSDEEWT--YRMQNLEVENVMLKNELNVLNREVADLLEKLRKTQD 755
            G  ++  +  + L++ S +E+   Y +   E+E+      L +LNR +   L K ++ + 
Sbjct: 1289 GSDEQSKTYAIRLDLYSRDEYQDEYGVLQEEIESTFSNRFLKILNRIIKSYLAKSKQRKS 1348

Query: 756  GNKVEKV 776
            G K + V
Sbjct: 1349 GGKDDTV 1355


>SPAC2F7.03c |pom1||DYRK family protein kinase
           Pom1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1087

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +3

Query: 339 PIPRNLKKISPVPEPRS-NYTPARKISPIQNLNKS 440
           P+P N K    VP+ RS +YTP R     ++L  S
Sbjct: 542 PLPSNFKDKGHVPQQRSVSYTPKRSSDTSESLQPS 576


>SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1024

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = +3

Query: 441 PVKGNQEPVRNGVVKTKKPLKKSNQYTLDNCPDTLVCDTKGSNTDHFGLRQRRHSLPVDL 620
           P  GN++ + + V +    LKKS  Y +D     +VC        HF +R R  S+  D 
Sbjct: 150 PAAGNEQALPSDV-RPPPVLKKSLDYLVDK----IVCGPDPLENTHFFVRDRTRSIRQDF 204

Query: 621 EI 626
            +
Sbjct: 205 TL 206


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
 Frame = +3

Query: 309  PDPSWNQRKRPIPRNLKKISPVPEPRSN----YTPARKI-SPIQNLNKSPVKGNQ---EP 464
            P P+ +    P+P    K  PVP P S      TP   + SP  N + SP   +     P
Sbjct: 1218 PVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSPTSSSMASAAP 1277

Query: 465  VRNGVVKTKKPLKKSNQYT 521
             R  V ++K   ++    T
Sbjct: 1278 ARTSVSRSKSKAERHETST 1296


>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
           Brl1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 692

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +3

Query: 594 RRHSLPVDLEIVSDEEWTYRMQNLEVENVMLKNE--LNVLNREVADLLEKLR 743
           R   L VD+  ++DE  +     LE++ V+  NE  +  +NR+++ L E ++
Sbjct: 271 RAAQLYVDIMGITDERVSREPHYLELKGVLSSNEEKIESINRDLSSLFEDIQ 322


>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 636

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 21/90 (23%), Positives = 38/90 (42%)
 Frame = +3

Query: 267 VKARKQENSDFILHPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPV 446
           V +R  +N++    P   +NQ+ +P+       S       ++ P + I P+Q+      
Sbjct: 351 VVSRSGQNNNQPAQPG-QYNQQSQPVQSYQSGQST-----QHFQPVQPIQPVQSTQYYQP 404

Query: 447 KGNQEPVRNGVVKTKKPLKKSNQYTLDNCP 536
               +PV+NGV        +S QY   + P
Sbjct: 405 SSPVQPVQNGVPAPPMQPVQSTQYYQPSSP 434


>SPBC56F2.11 |met6||homoserine
           O-acetyltransferase|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 489

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +3

Query: 288 NSDFILHPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKS 440
           N+ +++H + + N+R+RP   N    SP  E   N +PA  +S + +L  S
Sbjct: 272 NAHWVVHNEGNRNRRERPCRSN--GSSPTSESALN-SPASSVSSLPSLGAS 319


>SPAC20G8.05c |cdc15||cell division control protein
           Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 927

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 12/71 (16%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
 Frame = +3

Query: 414 SPIQNLNKSPVKGNQEPVRNGVVKTKKPLKKSNQYTLDN-CPDTLVCDTKGSNTDHFGLR 590
           +P+++ +K   K   +P+ N + +    +++    ++D+  P +L   +  +  +  G  
Sbjct: 572 APVESTSKEEDKDVPDPIANAMAELSSSMRRRQSTSVDDEAPVSLSKTSSSTRLNGLGYH 631

Query: 591 QRRHSLPVDLE 623
            R  S+  D++
Sbjct: 632 SRNTSIASDID 642


>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
           protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1400

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
 Frame = -2

Query: 709 FNTLSSFFNITFSTSKFCILYVHSSSLTISRSTGKLCLLCLKPKWSVL----LPLVSQTN 542
           FN+++        TS   +++  S S T++++T +L LLC +P   VL    LP V    
Sbjct: 384 FNSMNPLTKCAAQTSWIRLIHEFSLSETLTQATKRLTLLC-QPISMVLGSRNLPTVKNAA 442

Query: 541 VSGQLSKVY 515
           ++  ++ +Y
Sbjct: 443 MTTLIALIY 451


>SPCC188.02 |par1||protein phosphatase regulatory subunit Par1
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 548

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +3

Query: 615 DLEIVSDEEWTYRMQNLEVENVM-LKNELNVLNREVADLLEKL 740
           D EI+ +E WT  ++N+  EN M LK++         + L+KL
Sbjct: 500 DEEIIREERWTI-LENIAKENAMKLKSQNPTTVHSTTERLKKL 541


>SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1842

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 369 PVPEPRSNYTPARKISPIQNLNKSPVKGNQE 461
           P+P      TP ++  P  ++ K  V GN E
Sbjct: 580 PLPSSNDEQTPVKETIPFLHIRKKSVDGNWE 610


>SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 574

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 348 RNLKKISPVPEPRSNYTPARKISPIQNLNKSP 443
           RNL   +  P+   N+ PA + SP+   ++SP
Sbjct: 335 RNLTVRAGTPQSSPNFNPAMRRSPVGAASRSP 366


>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1016

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = -2

Query: 688 FNITFSTSKFCILYVHSSSLTISRSTGKL 602
           + +T S +   ++Y++  SLT++ ST ++
Sbjct: 227 YRVTMSDNHVWLIYIYGDSLTLTESTSQM 255


>SPBC14C8.02 |tim44||TIM23 translocase complex subunit
           Tim44|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 427

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = +3

Query: 273 ARKQENSDF---ILHPDPSWNQRKRPIPRNLKKISPVPEPRSNY 395
           AR Q N D    ++H +PSW  +   I    + +  + E + +Y
Sbjct: 192 ARIQPNEDVQSVVVHSNPSWKNKVEQIKNESRLVRKIQELKKSY 235


>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1208

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = +3

Query: 672 ENVMLKNELNVLNREVADLLEKLRKTQ-DGNKVEKVAN 782
           +++    E+NVLN E+AD L ++R  + D  +++K+ +
Sbjct: 754 DDIEKNKEINVLNSELADKLAQIRHLESDKMELDKLVH 791


>SPCC338.07c |||NatA N-acetyltransferase complex subunit
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 729

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = +3

Query: 327 QRKRPIPRNLKK-ISPVPEPRSNYTPARKISPIQNLNKSPVKGNQEPVRNGVVKTKKPLK 503
           + ++ I + LKK +S   E       A K S  ++ +  PVK +++P+   +V T +PLK
Sbjct: 602 EEEKKIYKKLKKDLSKRLERAEKLKEADK-SRAKSEDGMPVKYDEDPLGENLVATSEPLK 660

Query: 504 KSNQ 515
           ++ +
Sbjct: 661 EAQK 664


>SPAC323.08 |||ribonuclease MRP complex subunit |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 211

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 687 KNELNVLNREVADLLEKLRKTQDGNKVEKVA 779
           ++ L+V  R V  LL +L+++ DGN+  K+A
Sbjct: 21  QHRLSVWWRHVRMLLRRLKQSLDGNEKAKIA 51


>SPAC22E12.17c |glo3||ARF GTPase activating
           protein|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 486

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = +3

Query: 363 ISPVPEPRSNYTPARKISPIQNLNKSPVKGNQEPVRN--GVVKTKK-PLKKSN 512
           +SP   P S  T   K S I +    P++ +  P  +  G  + +K  +KK+N
Sbjct: 210 VSPPSRPDSTSTTKSKTSSISSARARPIRASSRPTASKLGASRPQKLGIKKAN 262


>SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 747

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 285 LVYVPSQHCDCVGLLLFARLNY*EVSQLFQLSP 187
           ++ V + HCD V   L  +L   E  ++  LSP
Sbjct: 270 IIAVTNTHCDIVTSFLLKKLQILEAPKVIDLSP 302


>SPAC5D6.10c |mug116||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 135

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 17/55 (30%), Positives = 23/55 (41%)
 Frame = +3

Query: 396 TPARKISPIQNLNKSPVKGNQEPVRNGVVKTKKPLKKSNQYTLDNCPDTLVCDTK 560
           TP +K +  +   K   K      +N V+K+    KK N Y    C   LVC  K
Sbjct: 82  TPTKKGNKTKKKRKKEKKKETIVEKNKVLKSFALYKKINNYRSTRC--VLVCQCK 134


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,263,425
Number of Sequences: 5004
Number of extensions: 69450
Number of successful extensions: 267
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 267
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 394431430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -