BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0775 (809 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 30 0.45 SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.45 SPBC1604.15 |gpi16||pig-T |Schizosaccharomyces pombe|chr 2|||Manual 29 0.59 SPCC736.10c |mrps8||mitochondrial ribosomal protein subunit S8|S... 29 1.0 SPCC126.04c |||SAGA complex subunit Sgf73 |Schizosaccharomyces p... 29 1.0 SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex lar... 28 1.8 SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 28 1.8 SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr... 27 2.4 SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 2.4 SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 27 3.2 SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 3.2 SPBC56F2.11 |met6||homoserine O-acetyltransferase|Schizosaccharo... 27 3.2 SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 27 3.2 SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 27 4.2 SPCC188.02 |par1||protein phosphatase regulatory subunit Par1 |S... 27 4.2 SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S... 26 5.5 SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase |Schizosac... 26 5.5 SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 26 5.5 SPBC14C8.02 |tim44||TIM23 translocase complex subunit Tim44|Schi... 26 5.5 SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 26 5.5 SPCC338.07c |||NatA N-acetyltransferase complex subunit |Schizos... 26 5.5 SPAC323.08 |||ribonuclease MRP complex subunit |Schizosaccharomy... 26 7.3 SPAC22E12.17c |glo3||ARF GTPase activating protein|Schizosacchar... 25 9.6 SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyce... 25 9.6 SPAC5D6.10c |mug116||sequence orphan|Schizosaccharomyces pombe|c... 25 9.6 >SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces pombe|chr 1|||Manual Length = 670 Score = 29.9 bits (64), Expect = 0.45 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = +3 Query: 651 RMQNLEVENVMLKNELNVLNREVADLLEKLRKTQDGNKVEKVANGHAE 794 R+ L EN LK +++ LN+E+ + +L + N +EK N E Sbjct: 216 RLDELMCENTALKEKIDKLNKELEKVEPQLTFLRSKNSIEKPRNFRRE 263 >SPCC162.08c |nup211||nuclear pore complex associated protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 1837 Score = 29.9 bits (64), Expect = 0.45 Identities = 18/81 (22%), Positives = 38/81 (46%) Frame = +3 Query: 504 KSNQYTLDNCPDTLVCDTKGSNTDHFGLRQRRHSLPVDLEIVSDEEWTYRMQNLEVENVM 683 KS L + D L D + L+Q + +E S++E+T + ++ + Sbjct: 785 KSENLLLTSVKDKLKADLSNLESKLSSLQQDNFHMKAQIES-SNQEYTATVDSMNSRILE 843 Query: 684 LKNELNVLNREVADLLEKLRK 746 L N+L V N ++++ + +R+ Sbjct: 844 LSNDLRVANSKLSECSDDVRR 864 >SPBC1604.15 |gpi16||pig-T |Schizosaccharomyces pombe|chr 2|||Manual Length = 545 Score = 29.5 bits (63), Expect = 0.59 Identities = 16/55 (29%), Positives = 27/55 (49%) Frame = +3 Query: 468 RNGVVKTKKPLKKSNQYTLDNCPDTLVCDTKGSNTDHFGLRQRRHSLPVDLEIVS 632 RNG K K + ++Y D D+L C G +T+H + H +P + ++S Sbjct: 247 RNGRRKGKTTFQPPSEYCHDEDMDSLHCLMSGYSTEHHTVDDLFHKVPKERCLLS 301 >SPCC736.10c |mrps8||mitochondrial ribosomal protein subunit S8|Schizosaccharomyces pombe|chr 3|||Manual Length = 152 Score = 28.7 bits (61), Expect = 1.0 Identities = 18/75 (24%), Positives = 34/75 (45%) Frame = +3 Query: 336 RPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPVKGNQEPVRNGVVKTKKPLKKSNQ 515 +P+ ++ +S P + N TP+ + + S V G EP G+V+TK + + Sbjct: 80 KPVLHYIRAVSK-PSRKVNLTPSELLQFAKGRKVSFVNG-LEPAEVGIVETKHGIMSIDD 137 Query: 516 YTLDNCPDTLVCDTK 560 +N ++C K Sbjct: 138 AIKNNLGGNVICRVK 152 >SPCC126.04c |||SAGA complex subunit Sgf73 |Schizosaccharomyces pombe|chr 3|||Manual Length = 344 Score = 28.7 bits (61), Expect = 1.0 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 3/35 (8%) Frame = +3 Query: 399 PARKISPIQN---LNKSPVKGNQEPVRNGVVKTKK 494 P + P+ N LNK GN P++NGV T K Sbjct: 109 PKPQFEPVANSQVLNKDVNNGNNAPIKNGVKSTAK 143 >SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex large subunit Nuc1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 1689 Score = 27.9 bits (59), Expect = 1.8 Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = +3 Query: 582 GLRQRRHSLPVDLEIVSDEEWT--YRMQNLEVENVMLKNELNVLNREVADLLEKLRKTQD 755 G ++ + + L++ S +E+ Y + E+E+ L +LNR + L K ++ + Sbjct: 1289 GSDEQSKTYAIRLDLYSRDEYQDEYGVLQEEIESTFSNRFLKILNRIIKSYLAKSKQRKS 1348 Query: 756 GNKVEKV 776 G K + V Sbjct: 1349 GGKDDTV 1355 >SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1087 Score = 27.9 bits (59), Expect = 1.8 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Frame = +3 Query: 339 PIPRNLKKISPVPEPRS-NYTPARKISPIQNLNKS 440 P+P N K VP+ RS +YTP R ++L S Sbjct: 542 PLPSNFKDKGHVPQQRSVSYTPKRSSDTSESLQPS 576 >SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr 3|||Manual Length = 1024 Score = 27.5 bits (58), Expect = 2.4 Identities = 18/62 (29%), Positives = 28/62 (45%) Frame = +3 Query: 441 PVKGNQEPVRNGVVKTKKPLKKSNQYTLDNCPDTLVCDTKGSNTDHFGLRQRRHSLPVDL 620 P GN++ + + V + LKKS Y +D +VC HF +R R S+ D Sbjct: 150 PAAGNEQALPSDV-RPPPVLKKSLDYLVDK----IVCGPDPLENTHFFVRDRTRSIRQDF 204 Query: 621 EI 626 + Sbjct: 205 TL 206 >SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 1611 Score = 27.5 bits (58), Expect = 2.4 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 8/79 (10%) Frame = +3 Query: 309 PDPSWNQRKRPIPRNLKKISPVPEPRSN----YTPARKI-SPIQNLNKSPVKGNQ---EP 464 P P+ + P+P K PVP P S TP + SP N + SP + P Sbjct: 1218 PVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSPTSSSMASAAP 1277 Query: 465 VRNGVVKTKKPLKKSNQYT 521 R V ++K ++ T Sbjct: 1278 ARTSVSRSKSKAERHETST 1296 >SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 Brl1|Schizosaccharomyces pombe|chr 3|||Manual Length = 692 Score = 27.1 bits (57), Expect = 3.2 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Frame = +3 Query: 594 RRHSLPVDLEIVSDEEWTYRMQNLEVENVMLKNE--LNVLNREVADLLEKLR 743 R L VD+ ++DE + LE++ V+ NE + +NR+++ L E ++ Sbjct: 271 RAAQLYVDIMGITDERVSREPHYLELKGVLSSNEEKIESINRDLSSLFEDIQ 322 >SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 636 Score = 27.1 bits (57), Expect = 3.2 Identities = 21/90 (23%), Positives = 38/90 (42%) Frame = +3 Query: 267 VKARKQENSDFILHPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPV 446 V +R +N++ P +NQ+ +P+ S ++ P + I P+Q+ Sbjct: 351 VVSRSGQNNNQPAQPG-QYNQQSQPVQSYQSGQST-----QHFQPVQPIQPVQSTQYYQP 404 Query: 447 KGNQEPVRNGVVKTKKPLKKSNQYTLDNCP 536 +PV+NGV +S QY + P Sbjct: 405 SSPVQPVQNGVPAPPMQPVQSTQYYQPSSP 434 >SPBC56F2.11 |met6||homoserine O-acetyltransferase|Schizosaccharomyces pombe|chr 2|||Manual Length = 489 Score = 27.1 bits (57), Expect = 3.2 Identities = 16/51 (31%), Positives = 28/51 (54%) Frame = +3 Query: 288 NSDFILHPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKS 440 N+ +++H + + N+R+RP N SP E N +PA +S + +L S Sbjct: 272 NAHWVVHNEGNRNRRERPCRSN--GSSPTSESALN-SPASSVSSLPSLGAS 319 >SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizosaccharomyces pombe|chr 1|||Manual Length = 927 Score = 27.1 bits (57), Expect = 3.2 Identities = 12/71 (16%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Frame = +3 Query: 414 SPIQNLNKSPVKGNQEPVRNGVVKTKKPLKKSNQYTLDN-CPDTLVCDTKGSNTDHFGLR 590 +P+++ +K K +P+ N + + +++ ++D+ P +L + + + G Sbjct: 572 APVESTSKEEDKDVPDPIANAMAELSSSMRRRQSTSVDDEAPVSLSKTSSSTRLNGLGYH 631 Query: 591 QRRHSLPVDLE 623 R S+ D++ Sbjct: 632 SRNTSIASDID 642 >SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1400 Score = 26.6 bits (56), Expect = 4.2 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 4/69 (5%) Frame = -2 Query: 709 FNTLSSFFNITFSTSKFCILYVHSSSLTISRSTGKLCLLCLKPKWSVL----LPLVSQTN 542 FN+++ TS +++ S S T++++T +L LLC +P VL LP V Sbjct: 384 FNSMNPLTKCAAQTSWIRLIHEFSLSETLTQATKRLTLLC-QPISMVLGSRNLPTVKNAA 442 Query: 541 VSGQLSKVY 515 ++ ++ +Y Sbjct: 443 MTTLIALIY 451 >SPCC188.02 |par1||protein phosphatase regulatory subunit Par1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 548 Score = 26.6 bits (56), Expect = 4.2 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Frame = +3 Query: 615 DLEIVSDEEWTYRMQNLEVENVM-LKNELNVLNREVADLLEKL 740 D EI+ +E WT ++N+ EN M LK++ + L+KL Sbjct: 500 DEEIIREERWTI-LENIAKENAMKLKSQNPTTVHSTTERLKKL 541 >SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1842 Score = 26.2 bits (55), Expect = 5.5 Identities = 10/31 (32%), Positives = 15/31 (48%) Frame = +3 Query: 369 PVPEPRSNYTPARKISPIQNLNKSPVKGNQE 461 P+P TP ++ P ++ K V GN E Sbjct: 580 PLPSSNDEQTPVKETIPFLHIRKKSVDGNWE 610 >SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase |Schizosaccharomyces pombe|chr 3|||Manual Length = 574 Score = 26.2 bits (55), Expect = 5.5 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 348 RNLKKISPVPEPRSNYTPARKISPIQNLNKSP 443 RNL + P+ N+ PA + SP+ ++SP Sbjct: 335 RNLTVRAGTPQSSPNFNPAMRRSPVGAASRSP 366 >SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1016 Score = 26.2 bits (55), Expect = 5.5 Identities = 8/29 (27%), Positives = 19/29 (65%) Frame = -2 Query: 688 FNITFSTSKFCILYVHSSSLTISRSTGKL 602 + +T S + ++Y++ SLT++ ST ++ Sbjct: 227 YRVTMSDNHVWLIYIYGDSLTLTESTSQM 255 >SPBC14C8.02 |tim44||TIM23 translocase complex subunit Tim44|Schizosaccharomyces pombe|chr 2|||Manual Length = 427 Score = 26.2 bits (55), Expect = 5.5 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Frame = +3 Query: 273 ARKQENSDF---ILHPDPSWNQRKRPIPRNLKKISPVPEPRSNY 395 AR Q N D ++H +PSW + I + + + E + +Y Sbjct: 192 ARIQPNEDVQSVVVHSNPSWKNKVEQIKNESRLVRKIQELKKSY 235 >SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1208 Score = 26.2 bits (55), Expect = 5.5 Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%) Frame = +3 Query: 672 ENVMLKNELNVLNREVADLLEKLRKTQ-DGNKVEKVAN 782 +++ E+NVLN E+AD L ++R + D +++K+ + Sbjct: 754 DDIEKNKEINVLNSELADKLAQIRHLESDKMELDKLVH 791 >SPCC338.07c |||NatA N-acetyltransferase complex subunit |Schizosaccharomyces pombe|chr 3|||Manual Length = 729 Score = 26.2 bits (55), Expect = 5.5 Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Frame = +3 Query: 327 QRKRPIPRNLKK-ISPVPEPRSNYTPARKISPIQNLNKSPVKGNQEPVRNGVVKTKKPLK 503 + ++ I + LKK +S E A K S ++ + PVK +++P+ +V T +PLK Sbjct: 602 EEEKKIYKKLKKDLSKRLERAEKLKEADK-SRAKSEDGMPVKYDEDPLGENLVATSEPLK 660 Query: 504 KSNQ 515 ++ + Sbjct: 661 EAQK 664 >SPAC323.08 |||ribonuclease MRP complex subunit |Schizosaccharomyces pombe|chr 1|||Manual Length = 211 Score = 25.8 bits (54), Expect = 7.3 Identities = 12/31 (38%), Positives = 21/31 (67%) Frame = +3 Query: 687 KNELNVLNREVADLLEKLRKTQDGNKVEKVA 779 ++ L+V R V LL +L+++ DGN+ K+A Sbjct: 21 QHRLSVWWRHVRMLLRRLKQSLDGNEKAKIA 51 >SPAC22E12.17c |glo3||ARF GTPase activating protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 486 Score = 25.4 bits (53), Expect = 9.6 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Frame = +3 Query: 363 ISPVPEPRSNYTPARKISPIQNLNKSPVKGNQEPVRN--GVVKTKK-PLKKSN 512 +SP P S T K S I + P++ + P + G + +K +KK+N Sbjct: 210 VSPPSRPDSTSTTKSKTSSISSARARPIRASSRPTASKLGASRPQKLGIKKAN 262 >SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 747 Score = 25.4 bits (53), Expect = 9.6 Identities = 11/33 (33%), Positives = 17/33 (51%) Frame = -3 Query: 285 LVYVPSQHCDCVGLLLFARLNY*EVSQLFQLSP 187 ++ V + HCD V L +L E ++ LSP Sbjct: 270 IIAVTNTHCDIVTSFLLKKLQILEAPKVIDLSP 302 >SPAC5D6.10c |mug116||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 135 Score = 25.4 bits (53), Expect = 9.6 Identities = 17/55 (30%), Positives = 23/55 (41%) Frame = +3 Query: 396 TPARKISPIQNLNKSPVKGNQEPVRNGVVKTKKPLKKSNQYTLDNCPDTLVCDTK 560 TP +K + + K K +N V+K+ KK N Y C LVC K Sbjct: 82 TPTKKGNKTKKKRKKEKKKETIVEKNKVLKSFALYKKINNYRSTRC--VLVCQCK 134 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,263,425 Number of Sequences: 5004 Number of extensions: 69450 Number of successful extensions: 267 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 242 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 267 length of database: 2,362,478 effective HSP length: 72 effective length of database: 2,002,190 effective search space used: 394431430 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -