Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0775
(809 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.16
SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_51988| Best HMM Match : bZIP_2 (HMM E-Value=7.3e-13) 32 0.48
SB_1658| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.16) 32 0.48
SB_10144| Best HMM Match : Extensin_2 (HMM E-Value=0.79) 31 0.84
SB_23780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_40542| Best HMM Match : B3_4 (HMM E-Value=0) 31 1.5
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 30 1.9
SB_25422| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_53804| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_39495| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_45061| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_15397| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_9567| Best HMM Match : CASP_C (HMM E-Value=2.8e-07) 29 3.4
SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_44617| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_51968| Best HMM Match : PT (HMM E-Value=0.54) 29 4.5
SB_1657| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_52297| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_12027| Best HMM Match : Extensin_2 (HMM E-Value=0.2) 29 5.9
SB_9407| Best HMM Match : DCX (HMM E-Value=2.6) 29 5.9
SB_21614| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-41) 28 7.8
SB_10953| Best HMM Match : HALZ (HMM E-Value=0.25) 28 7.8
SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_113| Best HMM Match : HALZ (HMM E-Value=0.32) 28 7.8
SB_53197| Best HMM Match : TP2 (HMM E-Value=5.8) 28 7.8
SB_50134| Best HMM Match : Sorting_nexin (HMM E-Value=6.3) 28 7.8
SB_40295| Best HMM Match : HALZ (HMM E-Value=0.25) 28 7.8
SB_33966| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_31204| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_26360| Best HMM Match : PKD_channel (HMM E-Value=1.3e-30) 28 7.8
SB_23367| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_19444| Best HMM Match : zf-C3HC4 (HMM E-Value=0.011) 28 7.8
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 33.9 bits (74), Expect = 0.16
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Frame = +3
Query: 303 LHPDPSWNQRKRPIPRNLKKISPVPE--PRSNYTPARKISPIQNLNKSPVKGNQEPVRNG 476
L P+PS N P + +P P P ++ P+ +SP N NK+ +G + N
Sbjct: 625 LSPNPSPNPSTSPYRNHSSNTNPNPSLGPNPSHNPSFSLSPNPNQNKTQGEGERATTMN- 683
Query: 477 VVKTKKPLKKSN-QYTLDNCPDTLVCDTKGSNTDHFGLRQRRHSLPVDL 620
T+K LK ++ + L T S TD L+ R ++ ++
Sbjct: 684 --DTQKGLKVDGVGFSQKHFDANLKGTTLASTTDSDNLQDRFGTISTEI 730
>SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/71 (23%), Positives = 31/71 (43%)
Frame = +3
Query: 300 ILHPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPVKGNQEPVRNGV 479
IL + +W + + + K +PV SN + ++P +NL+ P+ + N
Sbjct: 537 ILSGNSTWKRNNASVMSEINKPAPVENQGSNIEIGKLVTPTRNLSGMPMSRSPNYGNNAN 596
Query: 480 VKTKKPLKKSN 512
VK K +N
Sbjct: 597 VKDNLKQKSNN 607
>SB_51988| Best HMM Match : bZIP_2 (HMM E-Value=7.3e-13)
Length = 244
Score = 32.3 bits (70), Expect = 0.48
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +3
Query: 651 RMQNLEVENVMLKNELNVLNREVADLLEKLRKTQD 755
R QNLE+EN L+NE+ +L + + L KL ++++
Sbjct: 209 RAQNLEIENEKLRNEVTMLKKRLQTLNGKLDESEN 243
>SB_1658| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.16)
Length = 458
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/48 (31%), Positives = 30/48 (62%)
Frame = +3
Query: 651 RMQNLEVENVMLKNELNVLNREVADLLEKLRKTQDGNKVEKVANGHAE 794
R+ NLE+EN +L+ E++ LN E ++ +L++ +D K + + H +
Sbjct: 20 RVSNLELENKLLRKEVSSLNEE---MVSQLQRAKDAEKRAQETDRHLD 64
>SB_10144| Best HMM Match : Extensin_2 (HMM E-Value=0.79)
Length = 701
Score = 31.5 bits (68), Expect = 0.84
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 267 VKARKQENSDFILHPDPSWNQRKRPIPRNLKKISPVPEPRSN 392
VK QE + I+ P P + P PR K PVP PR +
Sbjct: 234 VKQMAQEYEENIIPPPPEFLGTAVPAPRTYKPRPPVPTPRKS 275
>SB_23780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 417 PIQNLNKSPVK-GNQEPVRNGVVKTKKPLKKSNQYTL 524
P++N+N P++ GN EP+RN KPL+ N +L
Sbjct: 99 PLRNVNNKPLRTGNNEPLRN---VNNKPLRTGNNESL 132
>SB_40542| Best HMM Match : B3_4 (HMM E-Value=0)
Length = 325
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Frame = +3
Query: 291 SDFILHPDPSWNQRKRPIPRNLKKISPVPEPR----SNYTPARKISPIQNLNKSPVKGNQ 458
SD + P P+W Q + LK I P+ +NY P+ + + +KGN+
Sbjct: 112 SDLTVKPSPAWLQNR------LKAIGLSPKNNIVDVTNYVLHELGQPLHAFDANKIKGNK 165
Query: 459 EPVRNGVVKTKKPLKKSNQYTLDNCPDTLVCDTKG 563
++ TK + TLD D ++C G
Sbjct: 166 VVIKTVAAGTKFTTLDDVERTLD-ADDLMICHADG 199
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 312 DPSWNQRKRPIPRNLKKISPVPEPRSNY-TPARKISPIQNLNKS-PVKGNQEPV 467
D S + R + +K SP P PRS+ T +RK+S + S P G Q PV
Sbjct: 344 DQSSHSSPRNSRNSSRKSSPKPSPRSSRPTSSRKLSRKSSRKSSRPTSGQQSPV 397
>SB_25422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 258
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 372 VPEPRSNYTPARKISPIQNLNKSPVKGNQEPVRNGVVKTKKPLKKSNQYTLDNCPDT 542
VP P YTP R + QNL +S ++ + E + KK KK+ Q + + P++
Sbjct: 135 VPTPPLAYTPVRSLKEEQNLRES-LQASVEESLESHEQEKKAKKKNKQPKIKHEPES 190
>SB_53804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 369 PVPEPRSNYTPARKISPIQNLNKSPVKG 452
P+ EP Y P ++ P + LN+ P+KG
Sbjct: 344 PIKEPYHVYEPGDQVLPPEELNEEPLKG 371
>SB_39495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/69 (27%), Positives = 29/69 (42%)
Frame = +3
Query: 213 LLNNLDEQTGAALRNHNVVKARKQENSDFILHPDPSWNQRKRPIPRNLKKISPVPEPRSN 392
L + + Q+ H + K+ K EN +L RNL + SP PR +
Sbjct: 45 LSSEMSHQSKTHANTHYLKKSPKGENQKTMLKIPVGGTLGALSSVRNLSQPSPAKRPRPS 104
Query: 393 YTPARKISP 419
+ A KI+P
Sbjct: 105 RSKANKINP 113
>SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +3
Query: 333 KRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPVKGNQEP 464
KR +P+ K + P E ++ T +SP++ +N+ + EP
Sbjct: 495 KRTVPKTAKDVLPPEETKTEVTTKEIVSPVKEVNELHREPETEP 538
>SB_45061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/69 (27%), Positives = 29/69 (42%)
Frame = +3
Query: 213 LLNNLDEQTGAALRNHNVVKARKQENSDFILHPDPSWNQRKRPIPRNLKKISPVPEPRSN 392
L + + Q+ H + K+ K EN +L RNL + SP PR +
Sbjct: 45 LSSEMSHQSKTHANTHYLKKSPKGENQKTMLKIPVGGTLGALSSVRNLSQPSPAKRPRPS 104
Query: 393 YTPARKISP 419
+ A KI+P
Sbjct: 105 RSKANKINP 113
>SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2462
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 423 QNLNKSPVKGNQEPVRNGVVKTKKPLKKSNQYTLDNCPDTLVCDTKGS 566
Q + SP+ G++ R +K PLKK + T + P T +C T S
Sbjct: 1873 QRVPVSPISGSKSSTRT--IKEPLPLKKRHLKTFQDTPVTDMCSTTSS 1918
>SB_15397| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/41 (26%), Positives = 25/41 (60%)
Frame = +3
Query: 633 DEEWTYRMQNLEVENVMLKNELNVLNREVADLLEKLRKTQD 755
+E + R LE+EN LK+E+N + +++ + +++ +D
Sbjct: 8 NESMSARNAQLEIENESLKSEVNTMKTDLSSMHSDMKEARD 48
>SB_9567| Best HMM Match : CASP_C (HMM E-Value=2.8e-07)
Length = 434
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +3
Query: 216 LNNLDEQTGAALRNHNVVKARKQENSDFILHPDPSWNQRKR--PIPRNLKKISPVPEPRS 389
L NL+ + G++LR+ +R + L P ++NQR + P +++S P P +
Sbjct: 272 LRNLELEAGSSLRDDEAAVSRYSSQYEQRLDPFAAFNQRGKSYPFAAFNQRVSLTPLPPN 331
Query: 390 NYTPARKISPIQNLNKSP 443
+ P Q +P
Sbjct: 332 QRVSLTHLPPNQRGKSNP 349
>SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1087
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/41 (26%), Positives = 25/41 (60%)
Frame = +3
Query: 633 DEEWTYRMQNLEVENVMLKNELNVLNREVADLLEKLRKTQD 755
+E + R LE+EN LK+E+N + +++ + +++ +D
Sbjct: 174 NESMSARNAQLEIENESLKSEVNTMKTDLSSMHSDMKEARD 214
>SB_44617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +3
Query: 432 NKSPVKGNQEPVRNGVVKTKKPLKKSNQY 518
NK PV Q P N +V T PLKKS Y
Sbjct: 30 NKRPVVRIQHPSPNAIVLTLTPLKKSLVY 58
>SB_51968| Best HMM Match : PT (HMM E-Value=0.54)
Length = 514
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/62 (20%), Positives = 27/62 (43%)
Frame = +3
Query: 264 VVKARKQENSDFILHPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSP 443
V + ++ E+ + + P P ++RP R K + P E + TP + + + P
Sbjct: 119 VTEVQEIEHEEIYVTPKPKTTVKRRPTERPTKSLLPEEEEKERQTPTPTKAKPTTIKRRP 178
Query: 444 VK 449
+
Sbjct: 179 TE 180
>SB_1657| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 174 MAWFADLAGKAETLLNNLDEQTGAAL 251
M+WF++LA KAE+LL +D L
Sbjct: 1 MSWFSELAVKAESLLEKVDNTAANVL 26
>SB_52297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 495 PLKKSNQYTLDNCPDTLVCDTKGSNTDHF-GLRQRRHSLPVD 617
P KK YTL P++L G DHF + +R H PVD
Sbjct: 42 PFKK--MYTLTGKPNSLHDSADGEEDDHFLKVIKRAHETPVD 81
>SB_12027| Best HMM Match : Extensin_2 (HMM E-Value=0.2)
Length = 1706
Score = 28.7 bits (61), Expect = 5.9
Identities = 38/152 (25%), Positives = 50/152 (32%), Gaps = 6/152 (3%)
Frame = +3
Query: 303 LHPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPVKGNQEPVRNGVV 482
+H P R + K P N RKISP Q+ Q P +
Sbjct: 906 IHDVPRSTSRSQRKDLGGKSDRPRSADNRNKRDKRKISPAQSGQSGKTSNKQSPRQTSRR 965
Query: 483 KTKKPLKKSNQYTLDNCP---DTLVCDTKGSNTDH--FGLRQRRHSLPVDLEIVSDEEWT 647
K + + L N VC G T H ++RH LP LE D +
Sbjct: 966 KRPNTEEVDLSHKLTNRKRQRKVTVCGPSGVQTTHAKSSESEKRHGLP-RLE-RKDNAGS 1023
Query: 648 YRMQNLEVENVML-KNELNVLNREVADLLEKL 740
Y Q EV ++ E +V DL L
Sbjct: 1024 YPRQGSEVSSIDTGDREFSVGKERALDLKNSL 1055
>SB_9407| Best HMM Match : DCX (HMM E-Value=2.6)
Length = 306
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 497 GFLRFYNSISYWLLIAFYRRFIQILYRRNLSS 402
GF F ++ ++AF RRFI ++YR SS
Sbjct: 267 GFPAFQIRSKFFAMLAFRRRFIYLVYRLTTSS 298
>SB_21614| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-41)
Length = 1047
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 651 RMQNLEVENVMLKNELNVLNREVADLLEKLR 743
++ LE EN L+ E NVLN ++ + +KLR
Sbjct: 29 KVTTLERENEALRVENNVLNSRISTITDKLR 59
>SB_10953| Best HMM Match : HALZ (HMM E-Value=0.25)
Length = 319
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 651 RMQNLEVENVMLKNELNVLNREVADLLEKLR 743
++ LE EN L+ E NVLN ++ + +KLR
Sbjct: 163 KVTTLERENEALRVENNVLNSRISTITDKLR 193
>SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1769
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/51 (31%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +3
Query: 636 EEWTYRMQNLEVENVMLKNELNVLNREVADLLEKLRKTQDGN--KVEKVAN 782
++W R L + +V+ + LN+++ EVA+LL +++ ++ N + EKV+N
Sbjct: 212 KDWEIRGVQLCMGSVVDADLLNLVSGEVANLLAEVQTAKESNEEESEKVSN 262
>SB_113| Best HMM Match : HALZ (HMM E-Value=0.32)
Length = 255
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 651 RMQNLEVENVMLKNELNVLNREVADLLEKLR 743
++ LE EN L+ E NVLN ++ + +KLR
Sbjct: 29 KVTTLERENEALRVENNVLNSRISTITDKLR 59
>SB_53197| Best HMM Match : TP2 (HMM E-Value=5.8)
Length = 217
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 296 FYLTSRPFLEPKKKANTTKFKENFTRSRATFKLHSCSKDFSYTEFE 433
F+ S+ L +++ T+K T R+T +LH CS D +T+F+
Sbjct: 146 FFSVSKEMLASRRR-QTSKAWRTTTHGRSTEQLHHCS-DCYFTQFD 189
>SB_50134| Best HMM Match : Sorting_nexin (HMM E-Value=6.3)
Length = 310
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 309 PDPSWNQRKRPIPRNLKKISPVPEPRSNY 395
P P+ Q+ P PRN ++ P P P+ +
Sbjct: 179 PKPAHRQKPVPAPRNKPELKPKPVPKPRF 207
>SB_40295| Best HMM Match : HALZ (HMM E-Value=0.25)
Length = 477
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 651 RMQNLEVENVMLKNELNVLNREVADLLEKLR 743
++ LE EN L+ E NVLN ++ + +KLR
Sbjct: 244 KVTTLERENEALRVENNVLNSRISTITDKLR 274
>SB_33966| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 657 QNLEVENVMLKNELNVLNREVADLLEKLRKTQDGNKVEKVANGHAE 794
+NL EN++LK ELN L E+ K+ QD ++E++ N E
Sbjct: 113 ENLMNENLLLKAELNKLKYELKVKDNKIESLQD--ELERMENEKTE 156
>SB_31204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Frame = +3
Query: 318 SWNQRKRPIPRN---LKKISPVPEPRSNYTPARKISPIQNLNKSPVKGN---QEPVRNGV 479
+W K+PIP N + + R + P+ + P PV+GN Q P R G
Sbjct: 641 AWGMHKKPIPANYFPAQMLLTEIGARGDLIPSAQRRPFVCKGPGPVRGNATSQPPRREGT 700
Query: 480 VKTKKPLKK--SNQYTLDN 530
+ L K + Q T N
Sbjct: 701 IALGSTLMKKFAQQRTASN 719
>SB_26360| Best HMM Match : PKD_channel (HMM E-Value=1.3e-30)
Length = 3015
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +2
Query: 320 LEPKKKANTTKFKENFTRSRATFKLHSCSKDFSYTEFE*ISCKRQSRASKKWSCKNEETL 499
++P K F F R RAT L S K+ + + R+S +S NEE L
Sbjct: 2069 IQPLKICILAIFLSCFFRKRATKDLVSGPKELIHVQETIPGQSRESANQLSFSVPNEEHL 2128
Query: 500 KKI 508
KK+
Sbjct: 2129 KKV 2131
>SB_23367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 357 KKISPVPEPRSNYTPARKISPIQNLNKSPVKGNQEPVR 470
K S +P+ +S++ RKIS ++ +NKSP K VR
Sbjct: 56 KHTSSIPDWKSSHAE-RKISVVERVNKSPHKWQDFKVR 92
>SB_19444| Best HMM Match : zf-C3HC4 (HMM E-Value=0.011)
Length = 434
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = +3
Query: 192 LAGKAETLLNNLDEQTGAALRNHNVVKARKQENSDFILHPDPSWNQRKRPIPRNLKKISP 371
LA +AE++LNN+++ T + VVK + Q + + I H ++ + + +N K+S
Sbjct: 326 LADEAESILNNMEDTTEQIFQEKKVVK-KLQVDEEEIKH---RISELQNQLAKNKSKLSE 381
Query: 372 VPE 380
E
Sbjct: 382 TQE 384
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,241,440
Number of Sequences: 59808
Number of extensions: 482065
Number of successful extensions: 1632
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1619
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2251677692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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