BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0775 (809 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh... 25 2.1 CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 24 4.8 CR954257-3|CAJ14154.1| 277|Anopheles gambiae predicted protein ... 24 6.4 AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein p... 24 6.4 >AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion protein protein. Length = 1881 Score = 25.4 bits (53), Expect = 2.1 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = +3 Query: 522 LDNCPDTLVCD--TKGSNTDHFGLRQRRHSLPVDLEIVSDEEWTYRM 656 LD ++VC G+ HFGL H L V+ E+ +++ Y++ Sbjct: 1422 LDGPAASVVCYYIVHGNEDGHFGLDPVSHDLTVEKELDREKKSLYKL 1468 >CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. Length = 1664 Score = 24.2 bits (50), Expect = 4.8 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Frame = +3 Query: 369 PVPEPRSNYTPARKISPI-QNLNKSPV--KGNQEPVRNGVVKTKKPLKKSN 512 P P SN TP+R ++ I + SP+ + N++P + + KP +SN Sbjct: 1312 PAPAAPSNSTPSRSVARIVTSFTDSPLFSRRNRQP-KAPDADSSKPQSESN 1361 >CR954257-3|CAJ14154.1| 277|Anopheles gambiae predicted protein protein. Length = 277 Score = 23.8 bits (49), Expect = 6.4 Identities = 13/47 (27%), Positives = 18/47 (38%) Frame = +2 Query: 344 TTKFKENFTRSRATFKLHSCSKDFSYTEFE*ISCKRQSRASKKWSCK 484 T F N R TF L + + E + K Q +W+CK Sbjct: 155 TQTFARNRPNVRYTFLLRQLNHGGDHAECGQVERKSQPFGPARWACK 201 >AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein protein. Length = 400 Score = 23.8 bits (49), Expect = 6.4 Identities = 14/66 (21%), Positives = 36/66 (54%) Frame = +3 Query: 588 RQRRHSLPVDLEIVSDEEWTYRMQNLEVENVMLKNELNVLNREVADLLEKLRKTQDGNKV 767 ++++ SLP +V + + +N+++ V+ + ++V D + K+R+TQ+G+ + Sbjct: 161 KKKKRSLPKPEAVVIE-----KCENIDLAKVLKGLTHDDALKDVGDQVAKVRRTQNGDML 215 Query: 768 EKVANG 785 + G Sbjct: 216 LVLKRG 221 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 806,485 Number of Sequences: 2352 Number of extensions: 17623 Number of successful extensions: 62 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 62 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 62 length of database: 563,979 effective HSP length: 63 effective length of database: 415,803 effective search space used: 85655418 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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