Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0774
(805 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44267| Best HMM Match : DUF602 (HMM E-Value=1.1e-29) 116 2e-26
SB_43236| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_5065| Best HMM Match : Histone (HMM E-Value=2.6e-33) 30 1.9
SB_24673| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_38972| Best HMM Match : PIP5K (HMM E-Value=0) 29 3.3
SB_7728| Best HMM Match : GBP_C (HMM E-Value=0.19) 29 4.4
SB_53828| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_45733| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_59269| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_44267| Best HMM Match : DUF602 (HMM E-Value=1.1e-29)
Length = 482
Score = 116 bits (280), Expect = 2e-26
Identities = 57/128 (44%), Positives = 77/128 (60%), Gaps = 3/128 (2%)
Frame = +3
Query: 150 MGCDGGTIPRRDELVRMKKKPEQKDKDAERSFKWRNCALSQQILQEPIVACSLGRLYSKS 329
MGCDGGTIP RDELVRMKK PE+ +K+ E + KW +CA+SQ+ L PIV+C LG LY+K
Sbjct: 1 MGCDGGTIPTRDELVRMKKAPEKVEKNYELNAKWFHCAISQEQLHSPIVSCELGNLYNKE 60
Query: 330 SVLEALLDKETRPESI-NHXXXXXXXXXXXXXXXPAY--VPTDHTDGTFDNGSAPYICPI 500
+LE LLD+ + + NH PA+ + G D ++ YICP+
Sbjct: 61 KLLEFLLDRSSATSDVANHIRNLKDTKQLNLTVNPAFEQKTKEQAGGYLDFQASQYICPV 120
Query: 501 SGLEMTGK 524
G+EM G+
Sbjct: 121 VGIEMNGR 128
>SB_43236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 225 KDAERSFKWRNCALSQQILQEPIVACSLGRLYSKSSVLEALLDKET 362
KD+ + F C+L+ Q +EP++ G LY K ++LE +L ++T
Sbjct: 37 KDSVKDFDC--CSLTLQPCREPVITPD-GFLYDKEAILECILHQKT 79
>SB_5065| Best HMM Match : Histone (HMM E-Value=2.6e-33)
Length = 330
Score = 30.3 bits (65), Expect = 1.9
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Frame = +3
Query: 78 KAKITQRWFCLG*RNSEKTH-IFHKMG-CDGGTIPRRDELVRMKKKPEQKDKDAERSFKW 251
K +I R L RN E+ + + H + GG +P + V + KK E+K K+ F+
Sbjct: 75 KTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNI-QAVLLPKKSEKKHKNIPGLFRA 133
Query: 252 RNCALSQQILQEPIVACSLGRLYSKSSVLEAL-LDKETRPE 371
+ L + VAC + Y+K + A+ L +PE
Sbjct: 134 KQTELFRVSCGSWHVACIVSGSYTKPPNVNAVPLPPSLKPE 174
>SB_24673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 30.3 bits (65), Expect = 1.9
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Frame = +3
Query: 78 KAKITQRWFCLG*RNSEKTH-IFHKMG-CDGGTIPRRDELVRMKKKPEQKDKDAERSFKW 251
K +I R L RN E+ + + H + GG +P + V + KK E+K K+ F+
Sbjct: 75 KTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNI-QAVLLPKKSEKKHKNIPGLFRA 133
Query: 252 RNCALSQQILQEPIVACSLGRLYSKSSVLEAL-LDKETRPE 371
+ L + VAC + Y+K + A+ L +PE
Sbjct: 134 KQTELFRVSCGSWHVACIVSGSYTKPPNVNAVPLPPSLKPE 174
>SB_38972| Best HMM Match : PIP5K (HMM E-Value=0)
Length = 426
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Frame = -2
Query: 234 QHLYLSVLASFSFERAHRVEELYRHH------NPFCEKYVFFHYFFIQDKTNVVLFLP*I 73
+ Y+ V+ S ER H + + Y HH N +Y+ + + K + +L + +
Sbjct: 142 KRFYVKVIESEEVERLHNILQPYHHHIVEQHANTLLPQYLAMYRVTVDGKESYMLVMTSV 201
Query: 72 FTTVHKV 52
F+T K+
Sbjct: 202 FSTRLKI 208
>SB_7728| Best HMM Match : GBP_C (HMM E-Value=0.19)
Length = 435
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 671 KTERQDGNSSI-KQENIKKNKAEKLEKSIIK 760
KTE QDGN I K +K EK+E++I+K
Sbjct: 317 KTEHQDGNKDIWKMVQNILSKLEKIEEAIVK 347
>SB_53828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 444
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 671 KTERQDGNSSI-KQENIKKNKAEKLEKSIIKTE 766
KTE QDGN I K +K E++E++I+K +
Sbjct: 242 KTEHQDGNKDIWKMVQNILSKLERIEEAIVKAD 274
>SB_45733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 806
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 669 EKLKDKMAIRVSNRKTLKRTRQRNWKSP*LKLKSIQDHRL 788
EKL+++ R++ KTL+ +R W+S LKS D +
Sbjct: 346 EKLREEQESRLTFEKTLREEMERRWQS----LKSYMDEEI 381
>SB_59269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 180 RDELVRMKKKPEQKDK---DAERSFKWRNCALSQQILQEPIVACSLGR 314
R +L R+ +K +Q D +A S WR C L + +Q P +A R
Sbjct: 854 RLQLTRIYEKKKQGDDINGEAITSLHWRFCTLVYERIQSPAIASEFDR 901
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,576,618
Number of Sequences: 59808
Number of extensions: 511475
Number of successful extensions: 1433
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1431
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2227723674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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