Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0774
(805 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81029-4|CAB02700.1| 300|Caenorhabditis elegans Hypothetical pr... 136 1e-32
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 31 0.97
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 31 1.3
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 31 1.3
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 31 1.3
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 31 1.3
U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical pr... 30 1.7
U42436-5|AAF99894.2| 796|Caenorhabditis elegans Not-like (yeast... 30 2.2
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z46812-2|CAA86844.1| 1027|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z93391-4|CAC42353.1| 397|Caenorhabditis elegans Hypothetical pr... 28 6.8
AL161712-12|CAC70144.1| 789|Caenorhabditis elegans Hypothetical... 28 6.8
AF125459-16|AAD12835.1| 578|Caenorhabditis elegans Hypothetical... 28 6.8
Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical pr... 28 9.0
AF016420-1|AAB65307.2| 310|Caenorhabditis elegans Serpentine re... 28 9.0
>Z81029-4|CAB02700.1| 300|Caenorhabditis elegans Hypothetical
protein C01A2.5 protein.
Length = 300
Score = 136 bits (330), Expect = 1e-32
Identities = 68/198 (34%), Positives = 106/198 (53%), Gaps = 2/198 (1%)
Frame = +3
Query: 150 MGCDGGTIPRRDELVRMKKKPEQKDKDAERSFKWRNCALSQQILQEPIVACSLGRLYSKS 329
MG DGGTIP+R ELV+ +KK E+ DK + + KWRNC L+Q L+ P++AC G+LY+K
Sbjct: 1 MGADGGTIPKRCELVKERKKKEKLDKHVKNATKWRNCQLTQLPLKRPVIACRFGKLYNKE 60
Query: 330 SVLEALLDKE-TRPESINHXXXXXXXXXXXXXXXPAYVPTD-HTDGTFDNGSAPYICPIS 503
V+ ++L K ++ S +H + D D D +ICPI+
Sbjct: 61 DVINSILSKTISKSASASHIKGPKDFVELKLTLNKDFKRGDVKGDDYNDVNQTEFICPIT 120
Query: 504 GLEMTGKFRFVFLWSCGCVLAERALKEVRQNLCHMCQQPFTDNDIVVLNGTEEDIEKLKD 683
+ M G F+ W CGCV +E+A +EV+ + CH+C P+ +V+LN E +E K
Sbjct: 121 NVPMNGIQSFLVNWQCGCVYSEKAQQEVKSSNCHVCGGPYDATKMVILNPEPEQLELYKL 180
Query: 684 KMAIRVSNRKTLKRTRQR 737
K + + K+ + +
Sbjct: 181 KWEAEKAEKAAAKKDKAK 198
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 31.1 bits (67), Expect = 0.97
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = -3
Query: 740 VSLPCSF*C--FPV*YSNCHLVFQFFNVFLCTIKNNY 636
VS PCSF FP+ CHLVF+ ++ + ++ N+
Sbjct: 156 VSAPCSFELSRFPIDAQECHLVFESYSYNIAEVRLNW 192
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +3
Query: 645 LNGTEEDIEKLKDKMAIRVSNRKTLKRTRQ---RNWKSP*LKLKSIQD--HRLLKIIH 803
L TE ++EKLKD++A+ + LK ++ W K++ + D K++H
Sbjct: 1021 LETTEAELEKLKDELAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANKVVH 1078
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +3
Query: 645 LNGTEEDIEKLKDKMAIRVSNRKTLKRTRQ---RNWKSP*LKLKSIQD--HRLLKIIH 803
L TE ++EKLKD++A+ + LK ++ W K++ + D K++H
Sbjct: 1021 LETTEAELEKLKDELAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANKVVH 1078
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +3
Query: 645 LNGTEEDIEKLKDKMAIRVSNRKTLKRTRQ---RNWKSP*LKLKSIQD--HRLLKIIH 803
L TE ++EKLKD++A+ + LK ++ W K++ + D K++H
Sbjct: 781 LETTEAELEKLKDELAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANKVVH 838
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +3
Query: 645 LNGTEEDIEKLKDKMAIRVSNRKTLKRTRQ---RNWKSP*LKLKSIQD--HRLLKIIH 803
L TE ++EKLKD++A+ + LK ++ W K++ + D K++H
Sbjct: 1021 LETTEAELEKLKDELAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANKVVH 1078
>U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical
protein F55F8.7 protein.
Length = 518
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = +2
Query: 671 KTERQDGNSSIKQENIKKNKAEKLEKSIIKTEINSGPSTSQDN 799
K +++DG+ + ++ +K+ K EK +K + +I+ S +DN
Sbjct: 112 KVDKKDGSKKLSKKKLKEEKKEKSKKVNKEKKISKTESDDEDN 154
>U42436-5|AAF99894.2| 796|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 4, isoform a protein.
Length = 796
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +3
Query: 555 CVLAERALKEVRQNLCHMCQQPFTDNDIVVLNGTEEDIEKLKDKMAIRVSNRKTLKRTRQ 734
C ++ LC C+QP+ ++ + T +D+ K KD+ ++ K LK +
Sbjct: 37 CRFCWHRIRTDENGLCPACRQPYPEDPVNFKPMTTDDVRKHKDEQRLKKQAEK-LKLSDA 95
Query: 735 RNW 743
R +
Sbjct: 96 RQY 98
>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical protein
C05C9.3 protein.
Length = 1225
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -2
Query: 567 QQAHSHSSREK-QNEIFQSSPSH**GRCKEHSHYQMSHQYGL*EHMQ 430
QQ +H R+ Q E+FQS P H + H H Q ++Q +H Q
Sbjct: 1114 QQNQNHHVRQAVQEEVFQSFPRH---DVQRHIHGQTNYQQNQRQHSQ 1157
>Z46812-2|CAA86844.1| 1027|Caenorhabditis elegans Hypothetical
protein ZK675.2 protein.
Length = 1027
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = -2
Query: 216 VLASFSFE-RAHRVEELYRHHNPFCEKY 136
+LAS++ E RA +E+Y + + FCEKY
Sbjct: 529 ILASYTLEVRAVSCDEMYINMSSFCEKY 556
>Z93391-4|CAC42353.1| 397|Caenorhabditis elegans Hypothetical
protein W04G5.10 protein.
Length = 397
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +3
Query: 597 LCHMCQQPFTDNDIVVLNGTEEDIEKLKDKMAIRVSNRKTLKRTR 731
L ++ ++ T++ L G+EED+E+ ++ +SN+ L RTR
Sbjct: 26 LLYIWRRILTNSSNSDLGGSEEDVERSLLTTSLPISNKYDLDRTR 70
>AL161712-12|CAC70144.1| 789|Caenorhabditis elegans Hypothetical
protein Y66D12A.15 protein.
Length = 789
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/46 (21%), Positives = 27/46 (58%)
Frame = -1
Query: 205 FFIRTSSSRRGIVPPSQPIL*KICVFSLFLYPRQNQRCVIFALNFY 68
+++R+ +R+ ++ P +IC F + + R+N + ++F+ N +
Sbjct: 534 YYLRSQIARKLLLAVMNPNKFRICQFLIKFHERRNDKIIVFSDNVF 579
>AF125459-16|AAD12835.1| 578|Caenorhabditis elegans Hypothetical
protein Y25C1A.1 protein.
Length = 578
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -3
Query: 191 ELIASRNCTAIT-THFVKNMCFFTISLSKTKPTLCYF 84
E+I N ++ THF K F +S S+T P C F
Sbjct: 356 EIIECDNMNSVAITHFAKGAAFVPMSDSQTAPVWCKF 392
>Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical
protein Y41E3.16 protein.
Length = 720
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 158 TTHFVKNMCFFTISLSKTKPTLCYFCLEFLL 66
TT F+KN F+ + + PT+ +F EF L
Sbjct: 617 TTSFLKNKIIFSTRIVISSPTIYFFFSEFCL 647
>AF016420-1|AAB65307.2| 310|Caenorhabditis elegans Serpentine
receptor, class sx protein11 protein.
Length = 310
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 4 YTHN-IFGQLTSSNTKYDFMYRSKNSRQK*HNVGFVLDKEIVKKHIFFTKWVVMAVQFLD 180
+ HN + L SNT Y M+RSK R++ ++V + + +F T +++ +D
Sbjct: 241 FAHNSLLTSLAYSNTFYVTMWRSKEYRKQFYSVWWPKKVQTSSAIVFHTNFILHKSSTMD 300
Query: 181 AMSS 192
+S
Sbjct: 301 FSAS 304
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,585,225
Number of Sequences: 27780
Number of extensions: 403764
Number of successful extensions: 1535
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1534
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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