BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0774 (805 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81029-4|CAB02700.1| 300|Caenorhabditis elegans Hypothetical pr... 136 1e-32 U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 31 0.97 U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 31 1.3 U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 31 1.3 U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 31 1.3 U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 31 1.3 U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical pr... 30 1.7 U42436-5|AAF99894.2| 796|Caenorhabditis elegans Not-like (yeast... 30 2.2 Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr... 29 3.9 Z46812-2|CAA86844.1| 1027|Caenorhabditis elegans Hypothetical pr... 29 5.1 Z93391-4|CAC42353.1| 397|Caenorhabditis elegans Hypothetical pr... 28 6.8 AL161712-12|CAC70144.1| 789|Caenorhabditis elegans Hypothetical... 28 6.8 AF125459-16|AAD12835.1| 578|Caenorhabditis elegans Hypothetical... 28 6.8 Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical pr... 28 9.0 AF016420-1|AAB65307.2| 310|Caenorhabditis elegans Serpentine re... 28 9.0 >Z81029-4|CAB02700.1| 300|Caenorhabditis elegans Hypothetical protein C01A2.5 protein. Length = 300 Score = 136 bits (330), Expect = 1e-32 Identities = 68/198 (34%), Positives = 106/198 (53%), Gaps = 2/198 (1%) Frame = +3 Query: 150 MGCDGGTIPRRDELVRMKKKPEQKDKDAERSFKWRNCALSQQILQEPIVACSLGRLYSKS 329 MG DGGTIP+R ELV+ +KK E+ DK + + KWRNC L+Q L+ P++AC G+LY+K Sbjct: 1 MGADGGTIPKRCELVKERKKKEKLDKHVKNATKWRNCQLTQLPLKRPVIACRFGKLYNKE 60 Query: 330 SVLEALLDKE-TRPESINHXXXXXXXXXXXXXXXPAYVPTD-HTDGTFDNGSAPYICPIS 503 V+ ++L K ++ S +H + D D D +ICPI+ Sbjct: 61 DVINSILSKTISKSASASHIKGPKDFVELKLTLNKDFKRGDVKGDDYNDVNQTEFICPIT 120 Query: 504 GLEMTGKFRFVFLWSCGCVLAERALKEVRQNLCHMCQQPFTDNDIVVLNGTEEDIEKLKD 683 + M G F+ W CGCV +E+A +EV+ + CH+C P+ +V+LN E +E K Sbjct: 121 NVPMNGIQSFLVNWQCGCVYSEKAQQEVKSSNCHVCGGPYDATKMVILNPEPEQLELYKL 180 Query: 684 KMAIRVSNRKTLKRTRQR 737 K + + K+ + + Sbjct: 181 KWEAEKAEKAAAKKDKAK 198 >U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine receptor family (seegbr) protein 3 protein. Length = 438 Score = 31.1 bits (67), Expect = 0.97 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Frame = -3 Query: 740 VSLPCSF*C--FPV*YSNCHLVFQFFNVFLCTIKNNY 636 VS PCSF FP+ CHLVF+ ++ + ++ N+ Sbjct: 156 VSAPCSFELSRFPIDAQECHLVFESYSYNIAEVRLNW 192 >U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical protein F35D11.11a protein. Length = 1840 Score = 30.7 bits (66), Expect = 1.3 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%) Frame = +3 Query: 645 LNGTEEDIEKLKDKMAIRVSNRKTLKRTRQ---RNWKSP*LKLKSIQD--HRLLKIIH 803 L TE ++EKLKD++A+ + LK ++ W K++ + D K++H Sbjct: 1021 LETTEAELEKLKDELAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANKVVH 1078 >U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical protein F35D11.11c protein. Length = 1898 Score = 30.7 bits (66), Expect = 1.3 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%) Frame = +3 Query: 645 LNGTEEDIEKLKDKMAIRVSNRKTLKRTRQ---RNWKSP*LKLKSIQD--HRLLKIIH 803 L TE ++EKLKD++A+ + LK ++ W K++ + D K++H Sbjct: 1021 LETTEAELEKLKDELAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANKVVH 1078 >U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical protein F35D11.11d protein. Length = 1671 Score = 30.7 bits (66), Expect = 1.3 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%) Frame = +3 Query: 645 LNGTEEDIEKLKDKMAIRVSNRKTLKRTRQ---RNWKSP*LKLKSIQD--HRLLKIIH 803 L TE ++EKLKD++A+ + LK ++ W K++ + D K++H Sbjct: 781 LETTEAELEKLKDELAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANKVVH 838 >U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical protein F35D11.11b protein. Length = 1911 Score = 30.7 bits (66), Expect = 1.3 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%) Frame = +3 Query: 645 LNGTEEDIEKLKDKMAIRVSNRKTLKRTRQ---RNWKSP*LKLKSIQD--HRLLKIIH 803 L TE ++EKLKD++A+ + LK ++ W K++ + D K++H Sbjct: 1021 LETTEAELEKLKDELAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANKVVH 1078 >U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical protein F55F8.7 protein. Length = 518 Score = 30.3 bits (65), Expect = 1.7 Identities = 12/43 (27%), Positives = 26/43 (60%) Frame = +2 Query: 671 KTERQDGNSSIKQENIKKNKAEKLEKSIIKTEINSGPSTSQDN 799 K +++DG+ + ++ +K+ K EK +K + +I+ S +DN Sbjct: 112 KVDKKDGSKKLSKKKLKEEKKEKSKKVNKEKKISKTESDDEDN 154 >U42436-5|AAF99894.2| 796|Caenorhabditis elegans Not-like (yeast ccr4/not complexcomponent) protein 4, isoform a protein. Length = 796 Score = 29.9 bits (64), Expect = 2.2 Identities = 15/63 (23%), Positives = 29/63 (46%) Frame = +3 Query: 555 CVLAERALKEVRQNLCHMCQQPFTDNDIVVLNGTEEDIEKLKDKMAIRVSNRKTLKRTRQ 734 C ++ LC C+QP+ ++ + T +D+ K KD+ ++ K LK + Sbjct: 37 CRFCWHRIRTDENGLCPACRQPYPEDPVNFKPMTTDDVRKHKDEQRLKKQAEK-LKLSDA 95 Query: 735 RNW 743 R + Sbjct: 96 RQY 98 >Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical protein C05C9.3 protein. Length = 1225 Score = 29.1 bits (62), Expect = 3.9 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = -2 Query: 567 QQAHSHSSREK-QNEIFQSSPSH**GRCKEHSHYQMSHQYGL*EHMQ 430 QQ +H R+ Q E+FQS P H + H H Q ++Q +H Q Sbjct: 1114 QQNQNHHVRQAVQEEVFQSFPRH---DVQRHIHGQTNYQQNQRQHSQ 1157 >Z46812-2|CAA86844.1| 1027|Caenorhabditis elegans Hypothetical protein ZK675.2 protein. Length = 1027 Score = 28.7 bits (61), Expect = 5.1 Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = -2 Query: 216 VLASFSFE-RAHRVEELYRHHNPFCEKY 136 +LAS++ E RA +E+Y + + FCEKY Sbjct: 529 ILASYTLEVRAVSCDEMYINMSSFCEKY 556 >Z93391-4|CAC42353.1| 397|Caenorhabditis elegans Hypothetical protein W04G5.10 protein. Length = 397 Score = 28.3 bits (60), Expect = 6.8 Identities = 14/45 (31%), Positives = 27/45 (60%) Frame = +3 Query: 597 LCHMCQQPFTDNDIVVLNGTEEDIEKLKDKMAIRVSNRKTLKRTR 731 L ++ ++ T++ L G+EED+E+ ++ +SN+ L RTR Sbjct: 26 LLYIWRRILTNSSNSDLGGSEEDVERSLLTTSLPISNKYDLDRTR 70 >AL161712-12|CAC70144.1| 789|Caenorhabditis elegans Hypothetical protein Y66D12A.15 protein. Length = 789 Score = 28.3 bits (60), Expect = 6.8 Identities = 10/46 (21%), Positives = 27/46 (58%) Frame = -1 Query: 205 FFIRTSSSRRGIVPPSQPIL*KICVFSLFLYPRQNQRCVIFALNFY 68 +++R+ +R+ ++ P +IC F + + R+N + ++F+ N + Sbjct: 534 YYLRSQIARKLLLAVMNPNKFRICQFLIKFHERRNDKIIVFSDNVF 579 >AF125459-16|AAD12835.1| 578|Caenorhabditis elegans Hypothetical protein Y25C1A.1 protein. Length = 578 Score = 28.3 bits (60), Expect = 6.8 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Frame = -3 Query: 191 ELIASRNCTAIT-THFVKNMCFFTISLSKTKPTLCYF 84 E+I N ++ THF K F +S S+T P C F Sbjct: 356 EIIECDNMNSVAITHFAKGAAFVPMSDSQTAPVWCKF 392 >Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical protein Y41E3.16 protein. Length = 720 Score = 27.9 bits (59), Expect = 9.0 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -3 Query: 158 TTHFVKNMCFFTISLSKTKPTLCYFCLEFLL 66 TT F+KN F+ + + PT+ +F EF L Sbjct: 617 TTSFLKNKIIFSTRIVISSPTIYFFFSEFCL 647 >AF016420-1|AAB65307.2| 310|Caenorhabditis elegans Serpentine receptor, class sx protein11 protein. Length = 310 Score = 27.9 bits (59), Expect = 9.0 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Frame = +1 Query: 4 YTHN-IFGQLTSSNTKYDFMYRSKNSRQK*HNVGFVLDKEIVKKHIFFTKWVVMAVQFLD 180 + HN + L SNT Y M+RSK R++ ++V + + +F T +++ +D Sbjct: 241 FAHNSLLTSLAYSNTFYVTMWRSKEYRKQFYSVWWPKKVQTSSAIVFHTNFILHKSSTMD 300 Query: 181 AMSS 192 +S Sbjct: 301 FSAS 304 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,585,225 Number of Sequences: 27780 Number of extensions: 403764 Number of successful extensions: 1535 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1392 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1534 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1966828226 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -