BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0774
(805 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 25 0.82
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 25 0.82
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 25 0.82
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 4.4
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 5.8
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 5.8
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 22 5.8
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 22 5.8
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 5.8
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 5.8
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 5.8
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 5.8
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 5.8
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 5.8
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 5.8
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 5.8
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 5.8
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 5.8
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 5.8
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 5.8
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 5.8
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 5.8
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 7.7
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 7.7
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 7.7
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 7.7
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 7.7
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 7.7
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.0 bits (52), Expect = 0.82
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 570 RALKEVRQNLCHMCQQP 620
R LKE N+C +C++P
Sbjct: 209 RRLKETYSNMCALCEKP 225
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.0 bits (52), Expect = 0.82
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 570 RALKEVRQNLCHMCQQP 620
R LKE N+C +C++P
Sbjct: 209 RRLKETYSNMCALCEKP 225
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.0 bits (52), Expect = 0.82
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 570 RALKEVRQNLCHMCQQP 620
R LKE N+C +C++P
Sbjct: 209 RRLKETYSNMCALCEKP 225
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 22.6 bits (46), Expect = 4.4
Identities = 8/32 (25%), Positives = 15/32 (46%)
Frame = -1
Query: 136 CVFSLFLYPRQNQRCVIFALNFYYGT*SRILY 41
C+ L YP +Q C + ++ Y ++Y
Sbjct: 161 CMMDLHYYPLDSQNCTVEIESYGYTVLDVVMY 192
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 660 EDIEKLKDKMAIRVSNRKTLKRTRQRNWKS 749
E + K+K+ ++RK R+R+R KS
Sbjct: 20 EKLHNEKEKLLEERTSRKRYSRSREREQKS 49
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 660 EDIEKLKDKMAIRVSNRKTLKRTRQRNWKS 749
E + K+K+ ++RK R+R+R KS
Sbjct: 20 EKLHNEKEKLLEERTSRKRYSRSREREQKS 49
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 660 EDIEKLKDKMAIRVSNRKTLKRTRQRNWKS 749
E + K+K+ ++RK R+R+R KS
Sbjct: 20 EKLHNEKEKLLEERTSRKRYSRSREREQKS 49
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 660 EDIEKLKDKMAIRVSNRKTLKRTRQRNWKS 749
E + K+K+ ++RK R+R+R KS
Sbjct: 20 EKLHNEKEKLLEERTSRKRYSRSREREQKS 49
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 660 EDIEKLKDKMAIRVSNRKTLKRTRQRNWKS 749
E + K+K+ ++RK R+R+R KS
Sbjct: 20 EKLHNEKEKLLEERTSRKRYSRSREREQKS 49
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 660 EDIEKLKDKMAIRVSNRKTLKRTRQRNWKS 749
E + K+K+ ++RK R+R+R KS
Sbjct: 20 EKLHNEKEKLLEERTSRKRYSRSREREQKS 49
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 660 EDIEKLKDKMAIRVSNRKTLKRTRQRNWKS 749
E + K+K+ ++RK R+R+R KS
Sbjct: 20 EKLHNEKEKLLEERTSRKRYSRSREREQKS 49
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 660 EDIEKLKDKMAIRVSNRKTLKRTRQRNWKS 749
E + K+K+ ++RK R+R+R KS
Sbjct: 20 EKLHNEKEKLLEERTSRKRYSRSREREQKS 49
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 660 EDIEKLKDKMAIRVSNRKTLKRTRQRNWKS 749
E + K+K+ ++RK R+R+R KS
Sbjct: 20 EKLHNEKEKLLEERTSRKRYSRSREREQKS 49
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.2 bits (45), Expect = 5.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 213 LASFSFERAHRVEELYRHHN 154
L F FER + ELY +N
Sbjct: 857 LKGFEFERLSHLRELYLQNN 876
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 660 EDIEKLKDKMAIRVSNRKTLKRTRQRNWKS 749
E + K+K+ ++RK R+R+R KS
Sbjct: 253 EKLHNEKEKLLEERTSRKRYSRSREREQKS 282
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 660 EDIEKLKDKMAIRVSNRKTLKRTRQRNWKS 749
E + K+K+ ++RK R+R+R KS
Sbjct: 242 EKLHNEKEKLLEERTSRKRYSRSREREQKS 271
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 660 EDIEKLKDKMAIRVSNRKTLKRTRQRNWKS 749
E + K+K+ ++RK R+R+R KS
Sbjct: 253 EKLHNEKEKLLEERTSRKRYSRSREREQKS 282
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 660 EDIEKLKDKMAIRVSNRKTLKRTRQRNWKS 749
E + K+K+ ++RK R+R+R KS
Sbjct: 253 EKLHNEKEKLLEERTSRKRYSRSREREQKS 282
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 660 EDIEKLKDKMAIRVSNRKTLKRTRQRNWKS 749
E + K+K+ ++RK R+R+R KS
Sbjct: 242 EKLHNEKEKLLEERTSRKRYSRSREREQKS 271
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 660 EDIEKLKDKMAIRVSNRKTLKRTRQRNWKS 749
E + K+K+ ++RK R+R+R KS
Sbjct: 253 EKLHNEKEKLLEERTSRKRYSRSREREQKS 282
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 660 EDIEKLKDKMAIRVSNRKTLKRTRQRNWKS 749
E + K+K+ ++RK R+R+R KS
Sbjct: 242 EKLHNEKEKLLEERTSRKRYSRSREREQKS 271
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 660 EDIEKLKDKMAIRVSNRKTLKRTRQRNWKS 749
E + K+K+ ++RK R+R+R KS
Sbjct: 258 EKLHNEKEKLLEERTSRKRYSRSREREQKS 287
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 7.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 660 EDIEKLKDKMAIRVSNRKTLKRTRQRNWKS 749
E + K+K+ ++RK R+R+R KS
Sbjct: 20 EKLHNEKEKLLEERTSRKRYSRSREREKKS 49
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 7.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 660 EDIEKLKDKMAIRVSNRKTLKRTRQRNWKS 749
E + K+K+ ++RK R+R+R KS
Sbjct: 20 EKLHNEKEKLLEERTSRKRYSRSREREKKS 49
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.8 bits (44), Expect = 7.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 660 EDIEKLKDKMAIRVSNRKTLKRTRQRNWKS 749
E + K+K+ ++RK R+R+R KS
Sbjct: 20 EKLHNEKEKLLEERTSRKRYSRSREREKKS 49
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 7.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 660 EDIEKLKDKMAIRVSNRKTLKRTRQRNWKS 749
E + K+K+ ++RK R+R+R KS
Sbjct: 20 EKLHNEKEKLLEERTSRKRYSRSREREKKS 49
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 21.8 bits (44), Expect = 7.7
Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = -2
Query: 141 KYVFF-HYFFIQDKTNVVLF 85
KY+ F +FFI+ TNV+ F
Sbjct: 8 KYINFDRFFFIEGMTNVLDF 27
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 7.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 660 EDIEKLKDKMAIRVSNRKTLKRTRQRNWKS 749
E + K+K+ ++RK R+R+R KS
Sbjct: 253 EKLHNEKEKLLEERTSRKRYSRSREREKKS 282
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,764
Number of Sequences: 438
Number of extensions: 4640
Number of successful extensions: 48
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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