BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0769 (838 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC685.08 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 32 0.088 SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 30 0.47 SPBC31F10.10c |||zf-MYND type zinc finger protein|Schizosaccharo... 28 1.4 SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 27 3.3 SPAC23C4.16c |atg15||triacylglycerol lipase Atg15 |Schizosacchar... 27 3.3 SPAC1782.08c |rex3||exonuclease Rex3 |Schizosaccharomyces pombe|... 27 4.4 >SPBC685.08 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 97 Score = 32.3 bits (70), Expect = 0.088 Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 3/83 (3%) Frame = +2 Query: 62 VFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQM---LFNKDSQLMEDEKTLA 232 V + +R+KLTV + + +V + K+++ L +PP S + F ++ + + L+ Sbjct: 2 VLVKFKREKLTVMLEVQPGLSVYDAVKLLKSALNLPPDSILRIGSFEQNDWVAMENDALS 61 Query: 233 EFGLTSNTAKAHCPAPIGLALRK 301 + +T+NT A L + K Sbjct: 62 KTIITNNTEYAFAEGEEPLLVEK 84 >SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces pombe|chr 3|||Manual Length = 1364 Score = 29.9 bits (64), Expect = 0.47 Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Frame = +2 Query: 188 FNKDSQLMEDEKTLAEFGLTSNTAKAHCPAPIGLALRKENGEFEALELT-PYSSPPDLPD 364 F+ ++ + ++ + + +TSN + L +N E + LT P ++ P L + Sbjct: 347 FSPIARPLTSQEAIVDMDITSNNINLSPVSHFSNGLDLQNLEEAPMNLTRPINANPHLTN 406 Query: 365 VMKSQETNGQEQMD 406 + TNG+E+MD Sbjct: 407 HSPNDLTNGEEEMD 420 >SPBC31F10.10c |||zf-MYND type zinc finger protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 574 Score = 28.3 bits (60), Expect = 1.4 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +3 Query: 528 PLRSGSRVQNIKQFYFLFTIKYF 596 PLRSGS+ NI Q FT+K++ Sbjct: 430 PLRSGSKTWNIFQLVEQFTLKFY 452 >SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr 2|||Manual Length = 538 Score = 27.1 bits (57), Expect = 3.3 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = -1 Query: 382 LLRFHNIWQVGG*RIRGKFQCLKFTILLPQS*SNWC 275 LL+ N+ ++GG + GK + FT+ P+ +WC Sbjct: 39 LLQLKNL-KLGGSEVSGKKKDTSFTLKTPKGTKDWC 73 >SPAC23C4.16c |atg15||triacylglycerol lipase Atg15 |Schizosaccharomyces pombe|chr 1|||Manual Length = 424 Score = 27.1 bits (57), Expect = 3.3 Identities = 14/53 (26%), Positives = 30/53 (56%) Frame = +3 Query: 543 SRVQNIKQFYFLFTIKYFVINISICVPFNVLLRFDLNIPSTVSTNIYIYIYKY 701 S++ +++F+FLF F+I IS F +++ N+P V+ + +++ Y Sbjct: 2 SQLLFLRRFFFLFC---FIIRISCTGVFESVIKSSENVPDKVNVKLQ-HVFHY 50 >SPAC1782.08c |rex3||exonuclease Rex3 |Schizosaccharomyces pombe|chr 1|||Manual Length = 540 Score = 26.6 bits (56), Expect = 4.4 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 4/90 (4%) Frame = +2 Query: 44 QNNIMDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEK 223 +N MDV + K+L T T TVL+ + + + + P NK QL+ Sbjct: 114 ENFRMDVLETYKCKQLNHQTTHLPTNTVLKKRSLFNDAISIVP------NKKKQLVSAIS 167 Query: 224 TLAEF-GLTSN---TAKAHCPAPIGLALRK 301 T ++ G +SN T K +P G LRK Sbjct: 168 TNSDSQGASSNIIPTPKYDSNSPAGHELRK 197 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,450,896 Number of Sequences: 5004 Number of extensions: 72839 Number of successful extensions: 182 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 176 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 182 length of database: 2,362,478 effective HSP length: 72 effective length of database: 2,002,190 effective search space used: 412451140 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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