Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0769
         (838 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_6410| Best HMM Match : No HMM Matches (HMM E-Value=.)               74   1e-13
SB_50995| Best HMM Match : Foamy_BEL (HMM E-Value=2.4)                 29   4.7  
SB_42817| Best HMM Match : zf-C3HC4 (HMM E-Value=0.12)                 29   4.7  
SB_14261| Best HMM Match : ig (HMM E-Value=0)                          29   4.7  
SB_36281| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.2  
SB_29501| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.2  
SB_30376| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.2  

>SB_6410| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 60

 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 36/60 (60%), Positives = 45/60 (75%)
 Frame = +2

Query: 128 LELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAEFGLTSNTAKAHCPAPIGLALRKEN 307
           +ELKK IEGI+K PP  Q LF KD QL++D KTL + G T+ TAKA  PA +GLALR+E+
Sbjct: 1   MELKKKIEGIIKRPPEDQKLF-KDDQLLDDNKTLGDCGFTNQTAKAQTPALVGLALRRED 59


>SB_50995| Best HMM Match : Foamy_BEL (HMM E-Value=2.4)
          Length = 354

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +1

Query: 382 DQWTGTDGSTLNEKRGCDSDVDDTDTNFVS 471
           D W   DG         +SD DD+DTN VS
Sbjct: 101 DDWVPFDGRRNINNNNYESDDDDSDTNMVS 130


>SB_42817| Best HMM Match : zf-C3HC4 (HMM E-Value=0.12)
          Length = 539

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +1

Query: 382 DQWTGTDGSTLNEKRGCDSDVDDTDTNFVS 471
           D W   DG         +SD DD+DTN VS
Sbjct: 314 DDWVPFDGRRNINNNNYESDDDDSDTNMVS 343


>SB_14261| Best HMM Match : ig (HMM E-Value=0)
          Length = 1337

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
 Frame = +3

Query: 582 TIKYFVINIS--ICVPFNVLLRFDLN 653
           T+ YF I IS  +C PFN+ +R +LN
Sbjct: 777 TVHYFDIEISGVVCSPFNITVRTNLN 802


>SB_36281| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 383

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +2

Query: 86  KLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAEFG 241
           K   FT+ K  T  +E    + G+L  P  +Q+  N++    EDE ++AE G
Sbjct: 148 KNVCFTEFKIPTIPIENITFVNGVLGTPAVAQIQENQNGTKTEDE-SMAEVG 198


>SB_29501| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 418

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +2

Query: 86  KLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAEFG 241
           K   FT+ K  T  +E    + G+L  P  +Q+  N++    EDE ++AE G
Sbjct: 183 KNVCFTEFKIPTIPIENITFVNGVLGTPAVAQIQENQNGTKTEDE-SMAEVG 233


>SB_30376| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1758

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 221 KTLAEFGLTSNTAKAHCPAPIGLALRKENGEFEALELT 334
           ++L E G   NTA +H   P+  A+    G FE+L  T
Sbjct: 408 QSLLEAGAHVNTADSHARTPLHYAVNATTGGFESLTET 445


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,916,006
Number of Sequences: 59808
Number of extensions: 508658
Number of successful extensions: 1842
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1838
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2359470773
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)